TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2949674.2.1
(658 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE124533.1|BE124533 EST393568 GVN Medicago truncatula cD... 159 4e-038
gb|BE316896.2|BE316896 NF065A11LF1F1081 Developing leaf Med... 159 4e-038
gb|BG580694.1|BG580694 EST482421 GVN Medicago truncatula cD... 159 4e-038
gb|CF069359.1|CF069359 EST670080 MTUS Medicago truncatula c... 159 4e-038
gb|CX516559.1|CX516559 s13dNF02E11VI083_337939 Virus-Infect... 159 4e-038
gb|CX520631.1|CX520631 s13dNF61A11VI083_449048 Virus-Infect... 159 4e-038
gb|CX521132.1|CX521132 s13dNF66B10VI079_450050 Virus-Infect... 159 4e-038
gb|CX522448.1|CX522448 s13dNF86A05VI034_470700 Virus-Infect... 159 4e-038
gb|CX539318.1|CX539318 s13dNF64F01GS011_461896 Germinating ... 159 4e-038
gb|AW981160.1|AW981160 EST392354 DSIL Medicago truncatula c... 154 1e-036
gb|BF520741.1|BF520741 EST458214 DSIL Medicago truncatula c... 154 1e-036
gb|CF068069.1|CF068069 EST668790 MTUS Medicago truncatula c... 154 1e-036
gb|CX517700.1|CX517700 s13dNF23B02VI025_420069 Virus-Infect... 154 1e-036
gb|CX518995.1|CX518995 s13dNF48G07VI056_439210 Virus-Infect... 154 1e-036
gb|DW015908.1|DW015908 EST1224869 MTY Medicago truncatula c... 154 1e-036
gb|BQ154115.1|BQ154115 NF054A09IR1F1068 Irradiated Medicago... 151 1e-035
gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone m... 147 1e-034
gb|AJ501604.1|AJ501604 AJ501604 MTAMP Medicago truncatula c... 144 1e-033
gb|BF519489.1|BF519489 EST456952 DSIL Medicago truncatula c... 142 5e-033
gb|BF519569.1|BF519569 EST457033 DSIL Medicago truncatula c... 142 5e-033
gb|AW687492.2|AW687492 NF010B10RT1F1080 Developing root Med... 142 5e-033
gb|BE249778.2|BE249778 NF022D06LF1F1057 Developing leaf Med... 142 5e-033
gb|BG448571.1|BG448571 NF037G11RT1F1085 Developing root Med... 142 5e-033
gb|BG454020.1|BG454020 NF104G01LF1F1004 Developing leaf Med... 142 5e-033
gb|BG458234.1|BG458234 NF052G10PL1F1081 Phosphate starved l... 142 5e-033
gb|BQ156214.1|BQ156214 NF090E06IR1F1051 Irradiated Medicago... 142 5e-033
gb|BQ157327.1|BQ157327 NF103F11IR1F1095 Irradiated Medicago... 142 5e-033
gb|AJ499041.1|AJ499041 AJ499041 MTPOSE Medicago truncatula ... 142 5e-033
gb|CA990012.1|CA990012 EST643520 GESD Medicago truncatula c... 142 5e-033
gb|CA918853.1|CA918853 EST636571 MTUS Medicago truncatula c... 142 5e-033
gb|CF068207.1|CF068207 EST668928 MTUS Medicago truncatula c... 142 5e-033
gb|CX541901.1|CX541901 s13dNF0BC08GS066_467110 Germinating ... 142 5e-033
gb|DW018020.1|DW018020 EST1226981 MTY Medicago truncatula c... 142 5e-033
gb|CA990105.1|CA990105 EST643613 GESD Medicago truncatula c... 141 1e-032
emb|CR931742.1| Medicago truncatula chromosome 5 clone mth2... 138 1e-031
emb|CR962136.2| Medicago truncatula chromosome 5 clone mth2... 138 1e-031
gb|AC130798.15| Medicago truncatula clone mth2-27f17, compl... 137 2e-031
gb|AC174306.3| Medicago truncatula clone mth2-116f22, WORKI... 137 2e-031
gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone m... 136 3e-031
gb|AC125479.16| Medicago truncatula clone mth2-7f11, comple... 135 6e-031
gb|AC166744.9| Medicago truncatula clone mth2-69h7, WORKING... 133 3e-030
emb|CT571260.1| Medicago truncatula chromosome 5 clone mth2... 127 1e-028
emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1... 118 7e-026
emb|CR332392.1| mte1-61J16RM1 BAC end, cultivar Jemalong A1... 114 2e-024
emb|CR340036.1| mte1-71D8RM1 BAC end, cultivar Jemalong A17... 114 2e-024
emb|CR340473.1| mte1-72K24FM1 BAC end, cultivar Jemalong A1... 114 2e-024
gb|BQ153045.1|BQ153045 NF027H08IR1F1076 Irradiated Medicago... 112 4e-024
>gb|BE124533.1|BE124533 EST393568 GVN Medicago truncatula cDNA clone pGVN-59N20, mRNA
sequence
Length = 521
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +3
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 150 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 329
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 330 GGPKCP* 350
>gb|BE316896.2|BE316896 NF065A11LF1F1081 Developing leaf Medicago truncatula cDNA clone
NF065A11LF 5', mRNA sequence
Length = 515
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 127 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 306
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 307 GGPKCP* 327
>gb|BG580694.1|BG580694 EST482421 GVN Medicago truncatula cDNA clone pGVN-61E10 5' end,
mRNA sequence
Length = 542
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +3
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 150 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 329
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 330 GGPKCP* 350
>gb|CF069359.1|CF069359 EST670080 MTUS Medicago truncatula cDNA clone MTUS-19D9, mRNA
sequence
Length = 555
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 163 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 342
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 343 GGPKCP* 363
>gb|CX516559.1|CX516559 s13dNF02E11VI083_337939 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 579
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +3
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 207 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 386
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 387 GGPKCP* 407
>gb|CX520631.1|CX520631 s13dNF61A11VI083_449048 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 557
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +3
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 186 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 365
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 366 GGPKCP* 386
>gb|CX521132.1|CX521132 s13dNF66B10VI079_450050 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 585
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 214 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 393
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 394 GGPKCP* 414
>gb|CX522448.1|CX522448 s13dNF86A05VI034_470700 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 559
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +2
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 215 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 394
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 395 GGPKCP* 415
>gb|CX539318.1|CX539318 s13dNF64F01GS011_461896 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 573
Score = 159 bits (342), Expect = 4e-038
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = +2 / +1
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
GSLQP ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKR
Sbjct: 202 GSLQPQECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKR 381
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 382 GGPKCP* 402
>gb|AW981160.1|AW981160 EST392354 DSIL Medicago truncatula cDNA clone pDSIL-12K9, mRNA
sequence
Length = 746
Score = 154 bits (331), Expect = 1e-036
Identities = 52/75 (69%), Positives = 58/75 (77%)
Frame = +2 / +1
Query: 305 YGGVTPGTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPC 484
YG G GSLQ ++C +C RC T Y KPC+FFC+KCCA CLCVPPG YGNK+ CPC
Sbjct: 121 YGSGNYGPGSLQSYQCPSQCTRRCGQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPC 300
Query: 485 YNNWKTKRGGPKCP* 529
YNNWKTKRGGPKCP*
Sbjct: 301 YNNWKTKRGGPKCP* 345
>gb|BF520741.1|BF520741 EST458214 DSIL Medicago truncatula cDNA clone pDSIL-39C10, mRNA
sequence
Length = 585
Score = 154 bits (331), Expect = 1e-036
Identities = 52/75 (69%), Positives = 58/75 (77%)
Frame = +2 / +2
Query: 305 YGGVTPGTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPC 484
YG G GSLQ ++C +C RC T Y KPC+FFC+KCCA CLCVPPG YGNK+ CPC
Sbjct: 128 YGSGNYGPGSLQSYQCPSQCTRRCGQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPC 307
Query: 485 YNNWKTKRGGPKCP* 529
YNNWKTKRGGPKCP*
Sbjct: 308 YNNWKTKRGGPKCP* 352
>gb|CF068069.1|CF068069 EST668790 MTUS Medicago truncatula cDNA clone MTUS-3D2, mRNA
sequence
Length = 753
Score = 154 bits (331), Expect = 1e-036
Identities = 52/75 (69%), Positives = 58/75 (77%)
Frame = +2 / +1
Query: 305 YGGVTPGTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPC 484
YG G GSLQ ++C +C RC T Y KPC+FFC+KCCA CLCVPPG YGNK+ CPC
Sbjct: 127 YGSGNYGPGSLQSYQCPSQCTRRCGQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPC 306
Query: 485 YNNWKTKRGGPKCP* 529
YNNWKTKRGGPKCP*
Sbjct: 307 YNNWKTKRGGPKCP* 351
>gb|CX517700.1|CX517700 s13dNF23B02VI025_420069 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 622
Score = 154 bits (331), Expect = 1e-036
Identities = 52/75 (69%), Positives = 58/75 (77%)
Frame = +2 / +1
Query: 305 YGGVTPGTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPC 484
YG G GSLQ ++C +C RC T Y KPC+FFC+KCCA CLCVPPG YGNK+ CPC
Sbjct: 160 YGSGNYGPGSLQSYQCPSQCTRRCGQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPC 339
Query: 485 YNNWKTKRGGPKCP* 529
YNNWKTKRGGPKCP*
Sbjct: 340 YNNWKTKRGGPKCP* 384
>gb|CX518995.1|CX518995 s13dNF48G07VI056_439210 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 526
Score = 154 bits (331), Expect = 1e-036
Identities = 52/75 (69%), Positives = 58/75 (77%)
Frame = +2 / +1
Query: 305 YGGVTPGTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPC 484
YG G GSLQ ++C +C RC T Y KPC+FFC+KCCA CLCVPPG YGNK+ CPC
Sbjct: 157 YGSGNYGPGSLQSYQCPSQCTRRCGQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPC 336
Query: 485 YNNWKTKRGGPKCP* 529
YNNWKTKRGGPKCP*
Sbjct: 337 YNNWKTKRGGPKCP* 381
>gb|DW015908.1|DW015908 EST1224869 MTY Medicago truncatula cDNA clone MTYAB09, mRNA
sequence
Length = 742
Score = 154 bits (331), Expect = 1e-036
Identities = 52/75 (69%), Positives = 58/75 (77%)
Frame = +2 / +3
Query: 305 YGGVTPGTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPC 484
YG G GSLQ ++C +C RC T Y KPC+FFC+KCCA CLCVPPG YGNK+ CPC
Sbjct: 174 YGSGNYGPGSLQSYQCPSQCTRRCGQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPC 353
Query: 485 YNNWKTKRGGPKCP* 529
YNNWKTKRGGPKCP*
Sbjct: 354 YNNWKTKRGGPKCP* 398
>gb|BQ154115.1|BQ154115 NF054A09IR1F1068 Irradiated Medicago truncatula cDNA clone
NF054A09IR 5', mRNA sequence
Length = 534
Score = 151 bits (324), Expect = 1e-035
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSLQ ++C +C RC T Y KPC+FFC+KCCA CLCVPPG YGNK+ CPCYNNWKT
Sbjct: 17 GPGSLQSYQCPSQCTRRCGQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPCYNNWKT 196
Query: 503 KRGGPKCP* 529
KRGGPKCP*
Sbjct: 197 KRGGPKCP* 223
>gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-73i16, complete
sequence
Length = 124955
Score = 147 bits (316), Expect = 1e-034
Identities = 50/61 (81%), Positives = 51/61 (83%)
Frame = +2 / -2
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECG RC RCS T Y+KPCLFFC KCCA CLCVPPG YGNK CPCYNNWKTKRGGPKCP
Sbjct: 26536 ECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVCPCYNNWKTKRGGPKCP 26357
Query: 527 * 529
*
Sbjct: 26356 * 26354
>gb|AJ501604.1|AJ501604 AJ501604 MTAMP Medicago truncatula cDNA clone mtgmadc120009c11,
mRNA sequence
Length = 594
Score = 144 bits (309), Expect = 1e-033
Identities = 47/77 (61%), Positives = 59/77 (76%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G L+P +C RC RCSAT+++KPC+FFC+KCCA CLCVPPG YGNK CPCYN+WKT
Sbjct: 184 GRAKLRPQDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPPGVYGNKQVCPCYNSWKT 363
Query: 503 KRGGPKCP**PSLSVYL 553
+ G PKCP* P+ + +
Sbjct: 364 QEGKPKCP*EPNFFIQI 414
>gb|BF519489.1|BF519489 EST456952 DSIL Medicago truncatula cDNA clone pDSIL-20H20, mRNA
sequence
Length = 486
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 182 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 361
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 362 QQGGPKCP* 388
>gb|BF519569.1|BF519569 EST457033 DSIL Medicago truncatula cDNA clone pDSIL-21I5, mRNA
sequence
Length = 582
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 144 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 323
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 324 QQGGPKCP* 350
>gb|AW687492.2|AW687492 NF010B10RT1F1080 Developing root Medicago truncatula cDNA clone
NF010B10RT 5', mRNA sequence
Length = 538
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 129 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 308
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 309 QQGGPKCP* 335
>gb|BE249778.2|BE249778 NF022D06LF1F1057 Developing leaf Medicago truncatula cDNA clone
NF022D06LF 5', mRNA sequence
Length = 380
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 106 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 285
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 286 QQGGPKCP* 312
>gb|BG448571.1|BG448571 NF037G11RT1F1085 Developing root Medicago truncatula cDNA clone
NF037G11RT 5', mRNA sequence
Length = 620
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 178 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 357
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 358 QQGGPKCP* 384
>gb|BG454020.1|BG454020 NF104G01LF1F1004 Developing leaf Medicago truncatula cDNA clone
NF104G01LF 5', mRNA sequence
Length = 623
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 181 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 360
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 361 QQGGPKCP* 387
>gb|BG458234.1|BG458234 NF052G10PL1F1081 Phosphate starved leaf Medicago truncatula cDNA
clone NF052G10PL 5', mRNA sequence
Length = 669
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 167 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 346
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 347 QQGGPKCP* 373
>gb|BQ156214.1|BQ156214 NF090E06IR1F1051 Irradiated Medicago truncatula cDNA clone
NF090E06IR 5', mRNA sequence
Length = 395
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 14 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 193
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 194 QQGGPKCP* 220
>gb|BQ157327.1|BQ157327 NF103F11IR1F1095 Irradiated Medicago truncatula cDNA clone
NF103F11IR 5', mRNA sequence
Length = 409
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 22 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 201
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 202 QQGGPKCP* 228
>gb|AJ499041.1|AJ499041 AJ499041 MTPOSE Medicago truncatula cDNA clone mt--acc955211e02,
mRNA sequence
Length = 584
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 212 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 391
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 392 QQGGPKCP* 418
>gb|CA990012.1|CA990012 EST643520 GESD Medicago truncatula cDNA clone GESD-27C16, mRNA
sequence
Length = 661
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 144 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 323
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 324 QQGGPKCP* 350
>gb|CA918853.1|CA918853 EST636571 MTUS Medicago truncatula cDNA clone MTUS-5B7, mRNA
sequence
Length = 618
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / -3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 463 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 284
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 283 QQGGPKCP* 257
>gb|CF068207.1|CF068207 EST668928 MTUS Medicago truncatula cDNA clone MTUS-5B7, mRNA
sequence
Length = 673
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +2
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 131 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 310
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 311 QQGGPKCP* 337
>gb|CX541901.1|CX541901 s13dNF0BC08GS066_467110 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 514
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 31 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 210
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 211 QQGGPKCP* 237
>gb|DW018020.1|DW018020 EST1226981 MTY Medicago truncatula cDNA clone MTYB123, mRNA
sequence
Length = 667
Score = 142 bits (305), Expect = 5e-033
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2 / +3
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 210 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKT 389
Query: 503 KRGGPKCP* 529
++GGPKCP*
Sbjct: 390 QQGGPKCP* 416
>gb|CA990105.1|CA990105 EST643613 GESD Medicago truncatula cDNA clone GESD-27H1, mRNA
sequence
Length = 597
Score = 141 bits (302), Expect = 1e-032
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = +2 / +1
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
G GSL+ ++C +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT
Sbjct: 343 GPGSLKSYQCPSQCSRRCKNTQYHKPCMFFCQKCCNKCLCVPPGYYGNKAVCPCYNNWKT 522
Query: 503 KRGGPKCP 526
++GGPKCP
Sbjct: 523 QQGGPKCP 546
>emb|CR931742.1| Medicago truncatula chromosome 5 clone mth2-28i20, COMPLETE SEQUENCE
Length = 115743
Score = 138 bits (295), Expect = 1e-031
Identities = 45/61 (73%), Positives = 51/61 (83%)
Frame = +2 / +3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC RC +RCS T ++KPCLF+C+ CCA CLCVPPGTYGNK CPCYN+WKTK GGPKCP
Sbjct: 40590 ECAPRCEDRCSKTHHKKPCLFYCKYCCAKCLCVPPGTYGNKEVCPCYNDWKTKEGGPKCP 40769
Query: 527 * 529
*
Sbjct: 40770 * 40772
>emb|CR962136.2| Medicago truncatula chromosome 5 clone mth2-52n22, COMPLETE SEQUENCE
Length = 87738
Score = 138 bits (295), Expect = 1e-031
Identities = 45/61 (73%), Positives = 51/61 (83%)
Frame = +2 / +2
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC RC +RCS T ++KPCLF+C+ CCA CLCVPPGTYGNK CPCYN+WKTK GGPKCP
Sbjct: 76061 ECAPRCEDRCSKTHHKKPCLFYCKYCCAKCLCVPPGTYGNKEVCPCYNDWKTKEGGPKCP 76240
Query: 527 * 529
*
Sbjct: 76241 * 76243
>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence
Length = 92189
Score = 137 bits (293), Expect = 2e-031
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = +2 / +1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECG C RCS T+++KPCLFFC+KCCA CLCVP GTYGNK CPCYNNWKTK G PKCP
Sbjct: 84694 ECGHACDHRCSKTSHKKPCLFFCKKCCAKCLCVPSGTYGNKQECPCYNNWKTKEGKPKCP 84873
Query: 527 * 529
*
Sbjct: 84874 * 84876
>gb|AC174306.3| Medicago truncatula clone mth2-116f22, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 63355
Score = 137 bits (293), Expect = 2e-031
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = +2 / +1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
ECG C RCS T+++KPCLFFC+KCCA CLCVP GTYGNK CPCYNNWKTK G PKCP
Sbjct: 55861 ECGHACDHRCSKTSHKKPCLFFCKKCCAKCLCVPSGTYGNKQECPCYNNWKTKEGKPKCP 56040
Query: 527 * 529
*
Sbjct: 56041 * 56043
>gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-63e12, complete
sequence
Length = 251117
Score = 136 bits (292), Expect = 3e-031
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +2 / -1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
+C RC RCSAT+++KPC+FFC+KCCA CLCVPPG YGNK CPCYN+WKT+ G PKCP
Sbjct: 29936 DCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPPGVYGNKQVCPCYNSWKTQEGKPKCP 29757
Query: 527 **PSLSVYL 553
* P+ + +
Sbjct: 29756 *EPNFFIQI 29730
>gb|AC125479.16| Medicago truncatula clone mth2-7f11, complete sequence
Length = 114214
Score = 135 bits (290), Expect = 6e-031
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +2 / +2
Query: 329 GSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKR 508
G+++ EC +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT++
Sbjct: 38114 GNVK*PECPSQCSRRCGQTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTQQ 38293
Query: 509 GGPKCP* 529
GGPKCP*
Sbjct: 38294 GGPKCP* 38314
>gb|AC166744.9| Medicago truncatula clone mth2-69h7, WORKING DRAFT SEQUENCE, 2 unordered
pieces
Length = 139796
Score = 133 bits (285), Expect = 3e-030
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +2 / -1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC +C+ RC T Y KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT++GGPKCP
Sbjct: 106289 ECPSQCSRRCKNTQYHKPCMFFCQKCCNKCLCVPPGYYGNKAVCPCYNNWKTQQGGPKCP 106110
Query: 527 * 529
*
Sbjct: 106109 * 106107
>emb|CT571260.1| Medicago truncatula chromosome 5 clone mth2-35p14, COMPLETE SEQUENCE
Length = 120436
Score = 127 bits (273), Expect = 1e-028
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +2 / -1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC +C RCS TAY+K CL +C CCA CLCVP GTYGNK CPCYNNWK K+GGPKCP
Sbjct: 35590 ECAPKCDYRCSKTAYKKACLTYCNLCCAKCLCVPSGTYGNKEECPCYNNWKNKKGGPKCP 35411
Query: 527 * 529
*
Sbjct: 35410 * 35408
Score = 119 bits (255), Expect = 4e-026
Identities = 41/61 (67%), Positives = 46/61 (75%)
Frame = +2 / -1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
+C G C RCSAT Y+K CL +C CCA CLCVP GTYG+K CPCY N +TKRGGPKCP
Sbjct: 83806 DCAGACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEECPCYANMRTKRGGPKCP 83627
Query: 527 * 529
*
Sbjct: 83626 * 83624
Score = 114 bits (243), Expect = 2e-024
Identities = 40/61 (65%), Positives = 43/61 (70%)
Frame = +2 / -1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC C RCSAT Y+K CL +C CCA CLCVP GTYG+K CPCY N KT GGPKCP
Sbjct: 30655 ECSAACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEECPCYANLKTHEGGPKCP 30476
Query: 527 * 529
*
Sbjct: 30475 * 30473
>emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1, COMPLETE SEQUENCE
Length = 139651
Score = 118 bits (253), Expect = 7e-026
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2 / +1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
+C +C RCS T+++K CL +C CCA CLCVP GTYGNK CPCY+NW+ K GGPKCP
Sbjct: 8062 DCAPKCDYRCSKTSHRKACLTYCNLCCAKCLCVPSGTYGNKQECPCYDNWRNKNGGPKCP 8241
Query: 527 **PSLSVYLM 556
* ++ + L+
Sbjct: 8242 *FCTVKLILL 8271
>emb|CR332392.1| mte1-61J16RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 662
Score = 114 bits (243), Expect = 2e-024
Identities = 40/61 (65%), Positives = 43/61 (70%)
Frame = +2 / -2
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC C RCSAT Y+K CL +C CCA CLCVP GTYG+K CPCY N KT GGPKCP
Sbjct: 610 ECSAACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEECPCYANLKTHEGGPKCP 431
Query: 527 * 529
*
Sbjct: 430 * 428
>emb|CR340036.1| mte1-71D8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 637
Score = 114 bits (243), Expect = 2e-024
Identities = 40/61 (65%), Positives = 43/61 (70%)
Frame = +2 / -1
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC C RCSAT Y+K CL +C CCA CLCVP GTYG+K CPCY N KT GGPKCP
Sbjct: 310 ECSAACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEECPCYANLKTHEGGPKCP 131
Query: 527 * 529
*
Sbjct: 130 * 128
>emb|CR340473.1| mte1-72K24FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 750
Score = 114 bits (243), Expect = 2e-024
Identities = 40/61 (65%), Positives = 43/61 (70%)
Frame = +2 / -3
Query: 347 ECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP 526
EC C RCSAT Y+K CL +C CCA CLCVP GTYG+K CPCY N KT GGPKCP
Sbjct: 628 ECSAACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEECPCYANLKTHEGGPKCP 449
Query: 527 * 529
*
Sbjct: 448 * 446
>gb|BQ153045.1|BQ153045 NF027H08IR1F1076 Irradiated Medicago truncatula cDNA clone
NF027H08IR 5', mRNA sequence
Length = 416
Score = 112 bits (240), Expect = 4e-024
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2 / +1
Query: 395 KPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKTKRGGPKCP* 529
KPC+FFC+KCC CLCVPPG YGNK CPCYNNWKT++GGPKCP*
Sbjct: 4 KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTQQGGPKCP* 138
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 452,010,865
Number of Sequences: 392609
Number of extensions: 5139704
Number of successful extensions: 35701
Number of sequences better than 1.0e-020: 56
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 20671124980
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)