TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2921718.2.1
(649 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA922301.1|CA922301 EST640019 MTUS Medicago truncatula c... 253 2e-066
gb|CG940943.1|CG940943 MBELN63TF mth2 Medicago truncatula g... 251 7e-066
emb|CR485906.1| mth2-155E9FM2 BAC end, cultivar Jemalong A1... 251 7e-066
gb|CG948326.1|CG948326 MBEIJ89TR mth2 Medicago truncatula g... 210 2e-056
gb|CG967052.1|CG967052 MBELD67TR mth2 Medicago truncatula g... 204 2e-055
gb|CG947524.1|CG947524 MBEIW04TR mth2 Medicago truncatula g... 216 3e-055
gb|BM779156.1|BM779156 EST589731 KV2 Medicago truncatula cD... 208 6e-053
gb|BM779448.1|BM779448 EST590024 KV2 Medicago truncatula cD... 207 2e-052
gb|CX529380.1|CX529380 s13dNF90B12MJ093_244814 Methyl Jasmo... 203 3e-051
gb|AW693031.1|AW693031 NF058H11ST1F1000 Developing stem Med... 195 6e-049
gb|AL384546.1|AL384546 MtBC22H06R1 MtBC Medicago truncatula... 179 3e-044
gb|AJ621869.1|AJ621869 AJ621869 Medicago truncatula J5 root... 178 6e-044
gb|AL381926.1|AL381926 MtBC03H02R1 MtBC Medicago truncatula... 130 2e-029
gb|AL384491.1|AL384491 MtBC22E01R1 MtBC Medicago truncatula... 111 1e-023
gb|AL376292.1|AL376292 MtBB22F04R1 MtBB Medicago truncatula... 106 3e-022
gb|AL376276.1|AL376276 MtBB22E04R1 MtBB Medicago truncatula... 105 9e-022
>gb|CA922301.1|CA922301 EST640019 MTUS Medicago truncatula cDNA clone MTUS-52A7, mRNA
sequence
Length = 824
Score = 253 bits (547), Expect = 2e-066
Identities = 98/120 (81%), Positives = 115/120 (95%)
Frame = +2 / -1
Query: 14 ARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVKQHA 193
++LA G++++GNV+V ETA IG+GCLIGPDVA+GPGC+VE+GVRLSRCTVMR R+K+HA
Sbjct: 701 SKLAGGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHA 522
Query: 194 CVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
C+SSSIIGWHSTVG+WARVENMTILGEDVHVCDEIYSNGGVVLPHKEIK++ILKPEIVM*
Sbjct: 521 CISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM* 342
Score = 185 bits (398), Expect = 7e-046
Identities = 82/119 (68%), Positives = 91/119 (76%)
Frame = -2 / +1
Query: 372 HMTISGLRMLDLISLCGSTTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQ 193
HMTISG R+ LISL G TTPPLL*ISSQT TSSPR+V+FSTRAH PTVEC P++LLE Q
Sbjct: 343 HMTISGFRIFVLISLWGKTTPPLL*ISSQT*TSSPRIVIFSTRAHCPTVECHPIILLEMQ 522
Query: 192 ACCLTRAARMTVQRDRRTPASTTQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
AC L R R+TVQR+ TP ST QPGP ATSGPMR PSP+ AVS T T P P A+L
Sbjct: 523 ACFLIRTPRITVQRESLTPDSTMQPGPIATSGPMRHPSPILAVSSTITFPTMLDPPANL 699
>gb|CG940943.1|CG940943 MBELN63TF mth2 Medicago truncatula genomic clone 81K6, DNA sequence
Length = 925
Score = 251 bits (543), Expect = 7e-066
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +2 / +2
Query: 14 ARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVKQHA 193
++LASG H+LGNV+VHETA IG+GCLIGPDVA+GPGC +E+GVRLS CTVMR R+K+HA
Sbjct: 413 SKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHA 592
Query: 194 CVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
C+SSSIIGWHSTVG+WARVENMTILGEDVHV DE+YSNGGVVLPHKEIK+SIL PEIVM*
Sbjct: 593 CISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM* 772
Score = 191 bits (412), Expect = 8e-048
Identities = 83/119 (69%), Positives = 91/119 (76%)
Frame = -2 / -2
Query: 372 HMTISGLRMLDLISLCGSTTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQ 193
HMTISG RML LISL G TTPPLL* SS TWTSSPR+V+FSTRAH PTVEC PMMLL+ Q
Sbjct: 771 HMTISGFRMLVLISLWGKTTPPLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQ 592
Query: 192 ACCLTRAARMTVQRDRRTPASTTQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
AC L R R+TVQ + TP S QPGP ATSGPMR PSP+ AVSCT T P+ P A+L
Sbjct: 591 ACFLIRTPRITVQHESLTPDSIVQPGPIATSGPMRHPSPILAVSCTITFPKM*GPLANL 415
>emb|CR485906.1| mth2-155E9FM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 777
Score = 251 bits (543), Expect = 7e-066
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +2 / +2
Query: 14 ARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVKQHA 193
++LASG H+LGNV+VHETA IG+GCLIGPDVA+GPGC +E+GVRLS CTVMR R+K+HA
Sbjct: 413 SKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHA 592
Query: 194 CVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
C+SSSIIGWHSTVG+WARVENMTILGEDVHV DE+YSNGGVVLPHKEIK+SIL PEIVM*
Sbjct: 593 CISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM* 772
Score = 191 bits (412), Expect = 8e-048
Identities = 83/119 (69%), Positives = 91/119 (76%)
Frame = -2 / -1
Query: 372 HMTISGLRMLDLISLCGSTTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQ 193
HMTISG RML LISL G TTPPLL* SS TWTSSPR+V+FSTRAH PTVEC PMMLL+ Q
Sbjct: 771 HMTISGFRMLVLISLWGKTTPPLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQ 592
Query: 192 ACCLTRAARMTVQRDRRTPASTTQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
AC L R R+TVQ + TP S QPGP ATSGPMR PSP+ AVSCT T P+ P A+L
Sbjct: 591 ACFLIRTPRITVQHESLTPDSIVQPGPIATSGPMRHPSPILAVSCTITFPKM*GPLANL 415
>gb|CG948326.1|CG948326 MBEIJ89TR mth2 Medicago truncatula genomic clone 62O10, DNA
sequence
Length = 929
Score = 210 bits (452), Expect(2) = 2e-056
Identities = 79/99 (79%), Positives = 92/99 (92%)
Frame = +2 / +2
Query: 14 ARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVKQHA 193
++LASG H+LGNV+VHETA IG+GCLIGPDVA+GPGC +E+GVRLS CTVMR R+K+HA
Sbjct: 593 SKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHA 772
Query: 194 CVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSNG 310
C+SSSIIGWHSTVG+WARVENMTILGEDVHV DE+YSNG
Sbjct: 773 CISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNG 889
Score = 155 bits (332), Expect(2) = 1e-037
Identities = 66/98 (67%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 309 PLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQACCLTRAARMTVQRDRRTPAS 130
PLL* SS TWTSSPR+V+FSTRAH PTVEC PMMLL+ QAC L R R+TVQ + TP S
Sbjct: 888 PLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQACFLIRTPRITVQHESLTPDS 709
Query: 129 TTQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
QPGP ATSGPMR PSP+ AVSCT T P+ P A+L
Sbjct: 708 IVQPGPIATSGPMRHPSPILAVSCTITFPKM*GPLANL 595
Score = 30.9 bits (61), Expect(2) = 2e-056
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +3
Query: 311 GVVLPHKEIKSSI 349
GVVLPHKEIK+SI
Sbjct: 891 GVVLPHKEIKTSI 929
Score = 23.1 bits (44), Expect(2) = 1e-037
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 348 MLDLISLCGSTTPPL 304
ML LISL G TTP +
Sbjct: 928 MLVLISLWGKTTPTI 884
>gb|CG967052.1|CG967052 MBELD67TR mth2 Medicago truncatula genomic clone 78L14, DNA
sequence
Length = 947
Score = 204 bits (440), Expect(2) = 2e-055
Identities = 77/97 (79%), Positives = 90/97 (92%)
Frame = +2 / +2
Query: 14 ARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVKQHA 193
++LASG H+LGNV+VHETA IG+GCLIGPDVA+GPGC +E+GVRLS CTVMR R+K+HA
Sbjct: 593 SKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHA 772
Query: 194 CVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYS 304
C+SSSIIGWHSTVG+WARVENMTILGEDVHV DE+YS
Sbjct: 773 CISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYS 883
Score = 151 bits (325), Expect(2) = 8e-038
Identities = 65/97 (67%), Positives = 73/97 (75%)
Frame = -2 / -3
Query: 306 LL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQACCLTRAARMTVQRDRRTPAST 127
LL* SS TWTSSPR+V+FSTRAH PTVEC PMMLL+ QAC L R R+TVQ + TP S
Sbjct: 885 LL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQACFLIRTPRITVQHESLTPDSI 706
Query: 126 TQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
QPGP ATSGPMR PSP+ AVSCT T P+ P A+L
Sbjct: 705 VQPGPIATSGPMRHPSPILAVSCTITFPKM*GPLANL 595
Score = 33.1 bits (66), Expect(2) = 2e-055
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 314 VVLPHKEIKSSILKPEI 364
VVLPHKEIK+SIL EI
Sbjct: 895 VVLPHKEIKTSILNREI 945
Score = 26.7 bits (52), Expect(2) = 8e-038
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 366 TISGLRMLDLISLCGSTT 313
TIS RML LISL G TT
Sbjct: 947 TISRFRMLVLISLWGKTT 894
>gb|CG947524.1|CG947524 MBEIW04TR mth2 Medicago truncatula genomic clone 65B7, DNA sequence
Length = 899
Score = 216 bits (466), Expect = 3e-055
Identities = 82/102 (80%), Positives = 95/102 (93%)
Frame = +2 / +2
Query: 14 ARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVKQHA 193
++LASG H+LGNV+VHETA IG+GCLIGPDVA+GPGC +E+GVRLS CTVMR R+K+HA
Sbjct: 593 SKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHA 772
Query: 194 CVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSNGGVV 319
C+SSSIIGWHSTVG+WARVENMTILGEDVHV DE+YSNGGVV
Sbjct: 773 CISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVV 898
Score = 162 bits (349), Expect = 4e-039
Identities = 69/101 (68%), Positives = 77/101 (76%)
Frame = -2 / -3
Query: 318 TTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQACCLTRAARMTVQRDRRT 139
TTPPLL* SS TWTSSPR+V+FSTRAH PTVEC PMMLL+ QAC L R R+TVQ + T
Sbjct: 897 TTPPLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQACFLIRTPRITVQHESLT 718
Query: 138 PASTTQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
P S QPGP ATSGPMR PSP+ AVSCT T P+ P A+L
Sbjct: 717 PDSIVQPGPIATSGPMRHPSPILAVSCTITFPKM*GPLANL 595
>gb|BM779156.1|BM779156 EST589731 KV2 Medicago truncatula cDNA clone pKV2-51K19, mRNA
sequence
Length = 618
Score = 208 bits (449), Expect = 6e-053
Identities = 78/101 (77%), Positives = 94/101 (93%)
Frame = +2 / +2
Query: 5 RHEARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVK 184
+ ++LA G++++GNV+V ETA IG+GCLIGPDVA+GPGC+VE+GVRLSRCTVMR R+K
Sbjct: 314 KSSSKLAGGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIK 493
Query: 185 QHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSN 307
+HAC+SSSIIGWHSTVG+WARVENMTILGEDVHVCDEIYSN
Sbjct: 494 KHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN 616
Score = 152 bits (326), Expect = 6e-036
Identities = 67/98 (68%), Positives = 75/98 (76%)
Frame = -2 / -1
Query: 309 PLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQACCLTRAARMTVQRDRRTPAS 130
PLL*ISSQT TSSPR+V+FSTRAH PTVEC P++LLE QAC L R R+TVQR+ TP S
Sbjct: 618 PLL*ISSQT*TSSPRIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDS 439
Query: 129 TTQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
T QPGP ATSGPMR PSP+ AVS T T P P A+L
Sbjct: 438 TMQPGPIATSGPMRHPSPILAVSSTITFPTMLDPPANL 325
>gb|BM779448.1|BM779448 EST590024 KV2 Medicago truncatula cDNA clone pKV2-52A17, mRNA
sequence
Length = 623
Score = 207 bits (446), Expect = 2e-052
Identities = 77/101 (76%), Positives = 94/101 (93%)
Frame = +2 / +1
Query: 5 RHEARLASGAHVLGNVLVHETAVIGDGCLIGPDVAVGPGCVVEAGVRLSRCTVMRAARVK 184
+ ++LA G++++GNV+V ETA IG+GCLIGPDVA+GPGC+VE+GV+LSRCTVMR R+K
Sbjct: 319 KSSSKLAGGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVKLSRCTVMRGVRIK 498
Query: 185 QHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSN 307
+HAC+SSSIIGWHSTVG+WARVENMTILGEDVHVCDEIYSN
Sbjct: 499 KHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN 621
Score = 152 bits (326), Expect = 6e-036
Identities = 67/98 (68%), Positives = 75/98 (76%)
Frame = -2 / -1
Query: 309 PLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQACCLTRAARMTVQRDRRTPAS 130
PLL*ISSQT TSSPR+V+FSTRAH PTVEC P++LLE QAC L R R+TVQR+ TP S
Sbjct: 623 PLL*ISSQT*TSSPRIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDS 444
Query: 129 TTQPGPTATSGPMRQPSPMTAVSCTSTLPRTCAPDASL 16
T QPGP ATSGPMR PSP+ AVS T T P P A+L
Sbjct: 443 TMQPGPIATSGPMRHPSPILAVSSTITFPTMLDPPANL 330
>gb|CX529380.1|CX529380 s13dNF90B12MJ093_244814 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 629
Score = 203 bits (437), Expect = 3e-051
Identities = 79/90 (87%), Positives = 88/90 (97%)
Frame = +2 / -3
Query: 104 VAVGPGCVVEAGVRLSRCTVMRAARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVH 283
VA+GPGC+VE+GVRLSRCTVMR R+K+HAC+SSSIIGWHSTVG+WARVENMTILGEDVH
Sbjct: 627 VAIGPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVH 448
Query: 284 VCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
VCDEIYSNGGVVLPHKEIK++ILKPEIVM*
Sbjct: 447 VCDEIYSNGGVVLPHKEIKTNILKPEIVM* 358
Score = 148 bits (317), Expect = 1e-034
Identities = 65/90 (72%), Positives = 72/90 (80%)
Frame = -2 / +2
Query: 372 HMTISGLRMLDLISLCGSTTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQ 193
HMTISG R+ LISL G TTPPLL*ISSQT TSSPR+V+FSTRAH PTVEC P++LLE Q
Sbjct: 359 HMTISGFRIFVLISLWGKTTPPLL*ISSQT*TSSPRIVIFSTRAHCPTVECHPIILLEMQ 538
Query: 192 ACCLTRAARMTVQRDRRTPASTTQPGPTAT 103
AC L R R+TVQR+ TP ST QPGP AT
Sbjct: 539 ACFLIRTPRITVQRESLTPDSTMQPGPIAT 628
>gb|AW693031.1|AW693031 NF058H11ST1F1000 Developing stem Medicago truncatula cDNA clone
NF058H11ST 5', mRNA sequence
Length = 657
Score = 195 bits (420), Expect = 6e-049
Identities = 76/86 (88%), Positives = 84/86 (97%)
Frame = +2 / -1
Query: 116 PGCVVEAGVRLSRCTVMRAARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCDE 295
PGC+VE+GVRLSRCTVMR R+K+HAC+SSSIIGWHSTVG+WARVENMTILGEDVHVCDE
Sbjct: 657 PGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDE 478
Query: 296 IYSNGGVVLPHKEIKSSILKPEIVM* 373
IYSNGGVVLPHKEIK++ILKPEIVM*
Sbjct: 477 IYSNGGVVLPHKEIKTNILKPEIVM* 400
Score = 138 bits (296), Expect = 8e-032
Identities = 61/85 (71%), Positives = 68/85 (80%)
Frame = -2 / +2
Query: 372 HMTISGLRMLDLISLCGSTTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQ 193
HMTISG R+ LISL G TTPPLL*ISSQT TSSPR+V+FSTRAH PTVEC P++LLE Q
Sbjct: 401 HMTISGFRIFVLISLWGKTTPPLL*ISSQT*TSSPRIVIFSTRAHCPTVECHPIILLEMQ 580
Query: 192 ACCLTRAARMTVQRDRRTPASTTQP 118
AC L R R+TVQR+ TP ST QP
Sbjct: 581 ACFLIRTPRITVQRESLTPDSTMQP 655
>gb|AL384546.1|AL384546 MtBC22H06R1 MtBC Medicago truncatula cDNA clone MtBC22H06 T7, mRNA
sequence
Length = 550
Score = 179 bits (386), Expect = 3e-044
Identities = 71/80 (88%), Positives = 78/80 (97%)
Frame = +2 / +1
Query: 134 AGVRLSRCTVMRAARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCDEIYSNGG 313
+GVRLSRCTVMR R+K+HAC+SSSIIGWHSTVG+WARVENMTILGEDVHVCDEIYSNGG
Sbjct: 1 SGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 180
Query: 314 VVLPHKEIKSSILKPEIVM* 373
VVLPHKEIK++ILKPEIVM*
Sbjct: 181 VVLPHKEIKTNILKPEIVM* 240
Score = 130 bits (278), Expect = 2e-029
Identities = 57/79 (72%), Positives = 64/79 (81%)
Frame = -2 / -3
Query: 372 HMTISGLRMLDLISLCGSTTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQ 193
HMTISG R+ LISL G TTPPLL*ISSQT TSSPR+V+FSTRAH PTVEC P++LLE Q
Sbjct: 239 HMTISGFRIFVLISLWGKTTPPLL*ISSQT*TSSPRIVIFSTRAHCPTVECHPIILLEMQ 60
Query: 192 ACCLTRAARMTVQRDRRTP 136
AC L R R+TVQR+ TP
Sbjct: 59 ACFLIRTPRITVQRESLTP 3
>gb|AJ621869.1|AJ621869 AJ621869 Medicago truncatula J5 roots Medicago truncatula cDNA
clone MtGmEs773, mRNA sequence
Length = 424
Score = 178 bits (384), Expect = 6e-044
Identities = 71/89 (79%), Positives = 79/89 (88%)
Frame = +2 / +2
Query: 107 AVGPGCVVEAGVRLSRCTVMRAARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHV 286
A C +E+GVRLS CTVMR R+K+HAC+SSSIIGWHSTVG+WARVENMTILGEDVHV
Sbjct: 14 AAARACTIESGVRLSCCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHV 193
Query: 287 CDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
DE+YSNGGVVLPHKEIK+SIL PEIVM*
Sbjct: 194 SDEVYSNGGVVLPHKEIKTSILNPEIVM* 280
Score = 135 bits (290), Expect = 5e-031
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = -2 / -2
Query: 372 HMTISGLRMLDLISLCGSTTPPLL*ISSQTWTSSPRMVMFSTRAHLPTVECQPMMLLETQ 193
HMTISG RML LISL G TTPPLL* SS TWTSSPR+V+FSTRAH PTVEC PMMLL+ Q
Sbjct: 279 HMTISGFRMLVLISLWGKTTPPLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQ 100
Query: 192 ACCLTRAARMTVQRDRRTPAS 130
AC L R R+TVQ + TP S
Sbjct: 99 ACFLIRTPRITVQHESLTPDS 37
>gb|AL381926.1|AL381926 MtBC03H02R1 MtBC Medicago truncatula cDNA clone MtBC03H02 T7, mRNA
sequence
Length = 465
Score = 130 bits (279), Expect = 2e-029
Identities = 52/55 (94%), Positives = 55/55 (100%)
Frame = +2 / +2
Query: 209 IIGWHSTVGKWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
IIGWHSTVG+WARVENMTILGEDVHVCDEIYSNGGVVLPHKEIK++ILKPEIVM*
Sbjct: 2 IIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM* 166
>gb|AL384491.1|AL384491 MtBC22E01R1 MtBC Medicago truncatula cDNA clone MtBC22E01 T7, mRNA
sequence
Length = 498
Score = 111 bits (237), Expect = 1e-023
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +2 / +1
Query: 230 VGKWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
VG+WARVENMTILGEDVHVCDEIYSNGGVVLPHKEIK++ILKPEIVM*
Sbjct: 1 VGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM* 144
>gb|AL376292.1|AL376292 MtBB22F04R1 MtBB Medicago truncatula cDNA clone MtBB22F04 T7, mRNA
sequence
Length = 520
Score = 106 bits (227), Expect = 3e-022
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2 / +3
Query: 236 KWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
+WARVENMTILGEDVHVCDEIYSNGGVVLPHKEIK++ILKPEIVM*
Sbjct: 3 QWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM* 140
>gb|AL376276.1|AL376276 MtBB22E04R1 MtBB Medicago truncatula cDNA clone MtBB22E04 T7, mRNA
sequence
Length = 521
Score = 105 bits (223), Expect = 9e-022
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +2 / +1
Query: 233 GKWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 373
G+WARVENMTILGEDVHVCDEIYSNGGVVLP KEIK++ILKPEIVM*
Sbjct: 1 GQWARVENMTILGEDVHVCDEIYSNGGVVLPPKEIKTNILKPEIVM* 141
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 492,057,744
Number of Sequences: 392609
Number of extensions: 6304348
Number of successful extensions: 42075
Number of sequences better than 1.0e-020: 16
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 20292994645
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)