TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ158962.1|BQ158962 NF096D02PL1F1016 Phosphate starved l... 127 7e-032
gb|BQ138926.1|BQ138926 NF009B09PH1F1074 Phoma-infected Medi... 127 7e-032
gb|BF650599.1|BF650599 NF098H07EC1F1062 Elicited cell cultu... 127 7e-032
gb|BQ156987.1|BQ156987 NF099D11IR1F1094 Irradiated Medicago... 127 7e-032
gb|BQ147288.1|BQ147288 NF038G08FL1F1068 Developing flower M... 127 7e-032
gb|BG455467.1|BG455467 NF059A09PL1F1067 Phosphate starved l... 127 7e-032
gb|BF650684.1|BF650684 NF095H12EC1F1102 Elicited cell cultu... 127 7e-032
gb|BI269926.1|BI269926 NF016D03IR1F1029 Irradiated Medicago... 132 6e-030
gb|AL377280.1|AL377280 MtBB30E04F1 MtBB Medicago truncatula... 131 9e-030
gb|AL378150.1|AL378150 MtBB36D03F1 MtBB Medicago truncatula... 131 9e-030
gb|AL386182.1|AL386182 MtBC33A08R1 MtBC Medicago truncatula... 131 9e-030
gb|AL389572.1|AL389572 MtBC55G10F1 MtBC Medicago truncatula... 131 9e-030
gb|BF635782.1|BF635782 NF039E11DT1F1084 Drought Medicago tr... 131 9e-030
gb|BI311023.1|BI311023 EST5312773 GESD Medicago truncatula ... 131 9e-030
gb|BQ135944.1|BQ135944 NF026A07EC1F1053 Elicited cell cultu... 131 9e-030
gb|AJ501900.1|AJ501900 AJ501900 MTAMP Medicago truncatula c... 131 9e-030
gb|AJ502907.1|AJ502907 AJ502907 MTAMP Medicago truncatula c... 131 9e-030
gb|CX524879.1|CX524879 s13dNF13A11AT085_478392 Aphid-Infect... 131 9e-030
gb|CX532293.1|CX532293 s13dNF67G06MJ040_270882 Methyl Jasmo... 131 9e-030
gb|CX532300.1|CX532300 s13dNF67H03MJ028_270895 Methyl Jasmo... 131 9e-030
gb|CX533946.1|CX533946 s13dNF0NA09MJ065_321656 Methyl Jasmo... 131 9e-030
gb|CX541058.1|CX541058 s13dNF58D03GS030_465404 Germinating ... 131 9e-030
gb|BI312231.1|BI312231 EST5313981 GESD Medicago truncatula ... 130 2e-029
gb|BI308544.1|BI308544 EST529954 GPOD Medicago truncatula c... 129 3e-029
gb|BI311382.1|BI311382 EST5313132 GESD Medicago truncatula ... 127 1e-028
gb|BQ154271.1|BQ154271 NF063D03IR1F1030 Irradiated Medicago... 127 1e-028
gb|AL381871.1|AL381871 MtBC03E07F1 MtBC Medicago truncatula... 127 2e-028
gb|AL382854.1|AL382854 MtBC10D02F1 MtBC Medicago truncatula... 122 5e-027
gb|AL378151.1|AL378151 MtBB36D03R1 MtBB Medicago truncatula... 121 1e-026
gb|AC137703.41| Medicago truncatula clone mth2-11d24, compl... 98 5e-026
gb|AC144765.19| Medicago truncatula clone mth2-35o11, compl... 98 5e-026
gb|BE942447.1|BE942447 EST422026 MGHG Medicago truncatula c... 118 6e-026
gb|DW015828.1|DW015828 EST1224789 MTY Medicago truncatula c... 116 4e-025
gb|AL382855.1|AL382855 MtBC10D02R1 MtBC Medicago truncatula... 108 1e-022
gb|BE239639.1|BE239639 EST403688 MHRP- Medicago truncatula ... 103 2e-021
gb|BE240754.1|BE240754 EST404803 MHRP- Medicago truncatula ... 103 2e-021
gb|BQ750469.1|BQ750469 EST633205 KVKC Medicago truncatula c... 103 2e-021
gb|BQ255131.1|BQ255131 MTNAD87TKM KVKC Medicago truncatula ... 101 8e-021
>gb|BQ158962.1|BQ158962 NF096D02PL1F1016 Phosphate starved leaf Medicago truncatula cDNA
clone NF096D02PL 5', mRNA sequence
Length = 785
Score = 127 bits (273), Expect(2) = 7e-032
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +3
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 228 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 404
Score = 30.4 bits (60), Expect(2) = 7e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 142 QKSKMARERNAEKNK 186
QK+KMARERN EK K
Sbjct: 192 QKAKMARERNLEKQK 236
>gb|BQ138926.1|BQ138926 NF009B09PH1F1074 Phoma-infected Medicago truncatula cDNA clone
NF009B09PH 5', mRNA sequence
Length = 595
Score = 127 bits (273), Expect(2) = 7e-032
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +1
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 133 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 309
Score = 30.4 bits (60), Expect(2) = 7e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 142 QKSKMARERNAEKNK 186
QK+KMARERN EK K
Sbjct: 97 QKAKMARERNLEKQK 141
>gb|BF650599.1|BF650599 NF098H07EC1F1062 Elicited cell culture Medicago truncatula cDNA
clone NF098H07EC 5', mRNA sequence
Length = 560
Score = 127 bits (273), Expect(2) = 7e-032
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +1
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 115 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 291
Score = 30.4 bits (60), Expect(2) = 7e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 142 QKSKMARERNAEKNK 186
QK+KMARERN EK K
Sbjct: 79 QKAKMARERNLEKQK 123
>gb|BQ156987.1|BQ156987 NF099D11IR1F1094 Irradiated Medicago truncatula cDNA clone
NF099D11IR 5', mRNA sequence
Length = 549
Score = 127 bits (273), Expect(2) = 7e-032
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +3
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 117 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 293
Score = 30.4 bits (60), Expect(2) = 7e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 142 QKSKMARERNAEKNK 186
QK+KMARERN EK K
Sbjct: 81 QKAKMARERNLEKQK 125
>gb|BQ147288.1|BQ147288 NF038G08FL1F1068 Developing flower Medicago truncatula cDNA clone
NF038G08FL 5', mRNA sequence
Length = 538
Score = 127 bits (273), Expect(2) = 7e-032
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +2
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 113 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 289
Score = 30.4 bits (60), Expect(2) = 7e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 142 QKSKMARERNAEKNK 186
QK+KMARERN EK K
Sbjct: 77 QKAKMARERNLEKQK 121
>gb|BG455467.1|BG455467 NF059A09PL1F1067 Phosphate starved leaf Medicago truncatula cDNA
clone NF059A09PL 5', mRNA sequence
Length = 528
Score = 127 bits (273), Expect(2) = 7e-032
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +3
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 120 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 296
Score = 30.4 bits (60), Expect(2) = 7e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 142 QKSKMARERNAEKNK 186
QK+KMARERN EK K
Sbjct: 84 QKAKMARERNLEKQK 128
>gb|BF650684.1|BF650684 NF095H12EC1F1102 Elicited cell culture Medicago truncatula cDNA
clone NF095H12EC 5', mRNA sequence
Length = 521
Score = 127 bits (273), Expect(2) = 7e-032
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +2
Query: 175 EKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 113 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 289
Score = 30.4 bits (60), Expect(2) = 7e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 142 QKSKMARERNAEKNK 186
QK+KMARERN EK K
Sbjct: 77 QKAKMARERNLEKQK 121
>gb|BI269926.1|BI269926 NF016D03IR1F1029 Irradiated Medicago truncatula cDNA clone
NF016D03IR 5', mRNA sequence
Length = 413
Score = 132 bits (282), Expect = 6e-030
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = +1 / +2
Query: 154 MARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQ 333
+AR + +++ GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+
Sbjct: 86 LARGTSRSRSRXGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFT 265
Query: 334 CFPHLK 351
CFPHLK
Sbjct: 266 CFPHLK 283
>gb|AL377280.1|AL377280 MtBB30E04F1 MtBB Medicago truncatula cDNA clone MtBB30E04 T3, mRNA
sequence
Length = 336
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 26 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 205
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 206 HAEARHPKSDLFTCFPHLK 262
>gb|AL378150.1|AL378150 MtBB36D03F1 MtBB Medicago truncatula cDNA clone MtBB36D03 T3, mRNA
sequence
Length = 481
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 43 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 222
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 223 HAEARHPKSDLFTCFPHLK 279
>gb|AL386182.1|AL386182 MtBC33A08R1 MtBC Medicago truncatula cDNA clone MtBC33A08 T7, mRNA
sequence
Length = 526
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 44 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 223
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 224 HAEARHPKSDLFTCFPHLK 280
>gb|AL389572.1|AL389572 MtBC55G10F1 MtBC Medicago truncatula cDNA clone MtBC55G10 T3, mRNA
sequence
Length = 499
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 49 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 228
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 229 HAEARHPKSDLFTCFPHLK 285
>gb|BF635782.1|BF635782 NF039E11DT1F1084 Drought Medicago truncatula cDNA clone NF039E11DT
5', mRNA sequence
Length = 552
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 52 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 231
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 232 HAEARHPKSDLFTCFPHLK 288
>gb|BI311023.1|BI311023 EST5312773 GESD Medicago truncatula cDNA clone pGESD9P15 5' end,
mRNA sequence
Length = 535
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 54 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 233
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 234 HAEARHPKSDLFTCFPHLK 290
>gb|BQ135944.1|BQ135944 NF026A07EC1F1053 Elicited cell culture Medicago truncatula cDNA
clone NF026A07EC 5', mRNA sequence
Length = 875
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 166 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 345
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 346 HAEARHPKSDLFTCFPHLK 402
>gb|AJ501900.1|AJ501900 AJ501900 MTAMP Medicago truncatula cDNA clone mtgmadc120013b05,
mRNA sequence
Length = 568
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 83 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 262
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 263 HAEARHPKSDLFTCFPHLK 319
>gb|AJ502907.1|AJ502907 AJ502907 MTAMP Medicago truncatula cDNA clone mtgmadc120027b10,
mRNA sequence
Length = 349
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 72 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 251
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 252 HAEARHPKSDLFTCFPHLK 308
>gb|CX524879.1|CX524879 s13dNF13A11AT085_478392 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 542
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 61 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 240
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 241 HAEARHPKSDLFTCFPHLK 297
>gb|CX532293.1|CX532293 s13dNF67G06MJ040_270882 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 526
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 45 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 224
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 225 HAEARHPKSDLFTCFPHLK 281
>gb|CX532300.1|CX532300 s13dNF67H03MJ028_270895 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 486
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 34 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 213
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 214 HAEARHPKSDLFTCFPHLK 270
>gb|CX533946.1|CX533946 s13dNF0NA09MJ065_321656 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 510
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 61 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 240
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 241 HAEARHPKSDLFTCFPHLK 297
>gb|CX541058.1|CX541058 s13dNF58D03GS030_465404 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 536
Score = 131 bits (281), Expect = 9e-030
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 55 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 234
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 235 HAEARHPKSDLFTCFPHLK 291
>gb|BI312231.1|BI312231 EST5313981 GESD Medicago truncatula cDNA clone pGESD17M22 5' end,
mRNA sequence
Length = 493
Score = 130 bits (278), Expect = 2e-029
Identities = 50/79 (63%), Positives = 59/79 (74%)
Frame = +1 / +3
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
S+ GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKE
Sbjct: 12 SSLGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKE 191
Query: 295 HAEARHPKNDLYQCFPHLK 351
HAEARHPK+DL+ CFPHLK
Sbjct: 192 HAEARHPKSDLFTCFPHLK 248
>gb|BI308544.1|BI308544 EST529954 GPOD Medicago truncatula cDNA clone pGPOD-7M19 5' end,
mRNA sequence
Length = 533
Score = 129 bits (277), Expect = 3e-029
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +1 / +1
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEA
Sbjct: 64 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 243
Query: 307 RHPKNDLYQCFPHLK 351
RHPK+DL+ CFPHLK
Sbjct: 244 RHPKSDLFTCFPHLK 288
>gb|BI311382.1|BI311382 EST5313132 GESD Medicago truncatula cDNA clone pGESD10P17 5' end,
mRNA sequence
Length = 508
Score = 127 bits (273), Expect = 1e-028
Identities = 48/75 (64%), Positives = 56/75 (74%)
Frame = +1 / +2
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEA
Sbjct: 59 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 238
Query: 307 RHPKNDLYQCFPHLK 351
RHPK+DL+ CFPH K
Sbjct: 239 RHPKSDLFTCFPHFK 283
>gb|BQ154271.1|BQ154271 NF063D03IR1F1030 Irradiated Medicago truncatula cDNA clone
NF063D03IR 5', mRNA sequence
Length = 524
Score = 127 bits (273), Expect = 1e-028
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +1 / +2
Query: 157 ARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQC 336
A ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ C
Sbjct: 98 AERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTC 277
Query: 337 FPHLK 351
FPHLK
Sbjct: 278 FPHLK 292
>gb|AL381871.1|AL381871 MtBC03E07F1 MtBC Medicago truncatula cDNA clone MtBC03E07 T3, mRNA
sequence
Length = 412
Score = 127 bits (271), Expect = 2e-028
Identities = 49/79 (62%), Positives = 58/79 (73%)
Frame = +1 / +2
Query: 115 SAAMGGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKE 294
SA GG + ++ + GKGSQLE NKKAM+IQCK+CMQTFICTTS+ KCKE
Sbjct: 47 SAMGGGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSKVKCKE 226
Query: 295 HAEARHPKNDLYQCFPHLK 351
HA ARHPK+DL+ CFPHLK
Sbjct: 227 HAXARHPKSDLFTCFPHLK 283
>gb|AL382854.1|AL382854 MtBC10D02F1 MtBC Medicago truncatula cDNA clone MtBC10D02 T3, mRNA
sequence
Length = 338
Score = 122 bits (261), Expect = 5e-027
Identities = 46/75 (61%), Positives = 55/75 (73%)
Frame = +1 / +3
Query: 127 GGGNAQKSKMARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEA 306
GG + + + GKGSQLE NKKA++IQCK+CMQTFICTTS+ KCKEHA A
Sbjct: 39 GGNGQKAKMARERNLEKXKQAGKGSQLEKNKKAISIQCKVCMQTFICTTSKVKCKEHAXA 218
Query: 307 RHPKNDLYQCFPHLK 351
RHPK+DL+ CFPHLK
Sbjct: 219 RHPKSDLFTCFPHLK 263
>gb|AL378151.1|AL378151 MtBB36D03R1 MtBB Medicago truncatula cDNA clone MtBB36D03 T7, mRNA
sequence
Length = 432
Score = 121 bits (259), Expect = 1e-026
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +1 / +2
Query: 196 GSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
GSQLE NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 2 GSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 157
>gb|AC137703.41| Medicago truncatula clone mth2-11d24, complete sequence
Length = 127446
Score = 98.2 bits (208), Expect(3) = 5e-026
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1 / -2
Query: 232 IQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
+QCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 124352 LQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 124233
Score = 46.0 bits (94), Expect(3) = 5e-026
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / -2
Query: 118 AAMGGGNAQKSKMARERNAEKNK 186
+AMGGGN QK+KMARERN EK K
Sbjct: 125987 SAMGGGNGQKAKMARERNLEKQK 125919
Score = 29.5 bits (58), Expect(3) = 5e-026
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1 / -3
Query: 196 GSQLEANKKAMNIQ 237
GSQLE NKKAM+IQ
Sbjct: 125755 GSQLEKNKKAMSIQ 125714
>gb|AC144765.19| Medicago truncatula clone mth2-35o11, complete sequence
Length = 130836
Score = 98.2 bits (208), Expect(3) = 5e-026
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1 / +1
Query: 232 IQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
+QCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 77287 LQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 77406
Score = 46.0 bits (94), Expect(3) = 5e-026
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 118 AAMGGGNAQKSKMARERNAEKNK 186
+AMGGGN QK+KMARERN EK K
Sbjct: 75652 SAMGGGNGQKAKMARERNLEKQK 75720
Score = 29.5 bits (58), Expect(3) = 5e-026
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 196 GSQLEANKKAMNIQ 237
GSQLE NKKAM+IQ
Sbjct: 75884 GSQLEKNKKAMSIQ 75925
>gb|BE942447.1|BE942447 EST422026 MGHG Medicago truncatula cDNA clone pMGHG-8F13, mRNA
sequence
Length = 428
Score = 118 bits (253), Expect = 6e-026
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1 / +1
Query: 154 MARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQ 333
+AR + +++ K + L+ NKKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+
Sbjct: 79 LARGTSRSRSRLAKEASLKKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFT 258
Query: 334 CFPHLK 351
CFPHLK
Sbjct: 259 CFPHLK 276
>gb|DW015828.1|DW015828 EST1224789 MTY Medicago truncatula cDNA clone MTYAA18, mRNA
sequence
Length = 529
Score = 116 bits (247), Expect = 4e-025
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +1 / +2
Query: 154 MARERNAEKNKGGKGSQLEANKKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQ 333
+AR + +++ K + L+ KKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+
Sbjct: 119 LARGTSRSRSRLAKEASLKKTKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFT 298
Query: 334 CFPHLK 351
CFPHLK
Sbjct: 299 CFPHLK 316
>gb|AL382855.1|AL382855 MtBC10D02R1 MtBC Medicago truncatula cDNA clone MtBC10D02 T7, mRNA
sequence
Length = 400
Score = 108 bits (230), Expect = 1e-022
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +1 / +1
Query: 217 KKAMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
KKAM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 1 KKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 135
>gb|BE239639.1|BE239639 EST403688 MHRP- Medicago truncatula cDNA clone pMHRP-28H18, mRNA
sequence
Length = 374
Score = 103 bits (220), Expect = 2e-021
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1 / +1
Query: 223 AMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
AM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 1 AMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 129
>gb|BE240754.1|BE240754 EST404803 MHRP- Medicago truncatula cDNA clone pMHRP-47D24, mRNA
sequence
Length = 374
Score = 103 bits (220), Expect = 2e-021
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1 / +1
Query: 223 AMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
AM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 1 AMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 129
>gb|BQ750469.1|BQ750469 EST633205 KVKC Medicago truncatula cDNA clone pKVKC-4H3, mRNA
sequence
Length = 342
Score = 103 bits (220), Expect = 2e-021
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1 / -1
Query: 223 AMNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
AM+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 342 AMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 214
>gb|BQ255131.1|BQ255131 MTNAD87TKM KVKC Medicago truncatula cDNA clone pKVKC-4H3, mRNA
sequence
Length = 341
Score = 101 bits (216), Expect = 8e-021
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +1 / +3
Query: 226 MNIQCKICMQTFICTTSEAKCKEHAEARHPKNDLYQCFPHLK 351
M+IQCK+CMQTFICTTSE KCKEHAEARHPK+DL+ CFPHLK
Sbjct: 3 MSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 128
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 478,315,414
Number of Sequences: 392609
Number of extensions: 6180563
Number of successful extensions: 64172
Number of sequences better than 1.0e-020: 46
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 19091844154
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)