TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2835489.2.1
(885 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4... 215 1e-091
gb|BM779905.1|BM779905 EST590481 KV2 Medicago truncatula cD... 311 9e-084
gb|BM779899.1|BM779899 EST590475 KV2 Medicago truncatula cD... 266 4e-070
gb|AW687058.1|AW687058 NF005E09RT1F1070 Developing root Med... 159 2e-059
gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone m... 111 4e-054
gb|BQ146788.1|BQ146788 NF028C08FL1F1065 Developing flower M... 153 9e-052
gb|BQ143777.1|BQ143777 NF058A09DT1F1069 Drought Medicago tr... 113 8e-035
gb|CG953701.1|CG953701 MBELK15TF mth2 Medicago truncatula g... 102 5e-028
gb|AJ547914.1|AJ547914 AJ547914 MTAPHEU Medicago truncatula... 121 2e-026
gb|AJ548213.1|AJ548213 AJ548213 MTAPHEU Medicago truncatula... 121 2e-026
gb|CX523067.1|CX523067 s13dNF88C10VI082_471938 Virus-Infect... 112 6e-024
gb|BG452923.1|BG452923 NF086F12LF1F1096 Developing leaf Med... 112 9e-024
gb|CX539956.1|CX539956 s13dNF43B05GS041_463184 Germinating ... 112 9e-024
gb|AJ548018.1|AJ548018 AJ548018 MTAPHEU Medicago truncatula... 109 8e-023
gb|AW774529.1|AW774529 EST333680 KV3 Medicago truncatula cD... 108 1e-022
emb|CR315610.1| mte1-4K11RM1 BAC end, cultivar Jemalong A17... 107 2e-022
>emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4-42c9, WORKING DRAFT SEQUENCE
Length = 235225
Score = 215 bits (463), Expect(4) = 1e-091
Identities = 85/138 (61%), Positives = 108/138 (78%)
Frame = -3 / +3
Query: 589 TLGTSILEAIQELVGVQTEVVYEKCPTEAMIETGGFSYAVVVVGEVPYAEWTGDRTDLSI 410
T GT+IL+A++E VG TEV+YEKCP+ IE FS+A+V +GE PYAE GD +L I
Sbjct: 149298 TSGTTILDAVKEAVGHDTEVIYEKCPSTEFIECNEFSFAIVAIGEAPYAECGGDNKELVI 149477
Query: 409 PFNGSDLIIRVASKIPTLVIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGD 230
PFNG+ ++ V+ KIPTLVI+ISGRPL++E +LEK EALVAAWLPGSEG GITD +FGD
Sbjct: 149478 PFNGAGIVDIVSDKIPTLVILISGRPLVLEQSLLEKTEALVAAWLPGSEGKGITDVIFGD 149657
Query: 229 HDFVGTLPVTWCKSVDQL 176
HDF G LP+TW + ++QL
Sbjct: 149658 HDFKGKLPMTWFRRIEQL 149711
Score = 215 bits (463), Expect(4) = 5e-091
Identities = 85/138 (61%), Positives = 108/138 (78%)
Frame = -3 / -1
Query: 589 TLGTSILEAIQELVGVQTEVVYEKCPTEAMIETGGFSYAVVVVGEVPYAEWTGDRTDLSI 410
T GT+IL+A++E VG TEV+YEKCP+ IE FS+A+V +GE PYAE GD +L I
Sbjct: 116848 TSGTTILDAVKEAVGHDTEVIYEKCPSTEFIECNEFSFAIVAIGEAPYAECGGDNKELVI 116669
Query: 409 PFNGSDLIIRVASKIPTLVIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGD 230
PFNG+ ++ +A KIPTLVI+ISGRPL++E +LEK EALVAAWLPGSEG GITD +FGD
Sbjct: 116668 PFNGAGIVDIIADKIPTLVILISGRPLVLEQGLLEKTEALVAAWLPGSEGKGITDVIFGD 116489
Query: 229 HDFVGTLPVTWCKSVDQL 176
HDF G LP+TW + ++QL
Sbjct: 116488 HDFKGKLPMTWFRRIEQL 116435
Score = 154 bits (330), Expect(3) = 2e-057
Identities = 76/134 (56%), Positives = 87/134 (64%)
Frame = +3 / -1
Query: 192 LHHVTGNVPTKS*SPKRQSVIPMPSLPGSQAATRASIFSKTCDSIINGLPDITITRVGIL 371
L+ V G++P KS*SPK SVIP PSLPG+ AATRAS+FS S GLPDI IT VGIL
Sbjct: 149695 LNQVIGSLPLKS*SPKITSVIPFPSLPGNHAATRASVFSNKLCSKTKGLPDIRITSVGIL 149516
Query: 372 LATRMIRSEPLNGILRSVLSPVHSAYGTSPTTTTA*ENPPVSIIASVGHFSYTTSVCTPT 551
T PLNGI S+LSP HSA G SP T A EN S+ + GHFSY TSV PT
Sbjct: 149515 SETMSTIPAPLNGITSSLLSPPHSA*GASPIATMAKENSLHSMNSVDGHFSYITSVSCPT 149336
Query: 552 NSCMASNMLVPRVI 593
S AS ++VP V+
Sbjct: 149335 ASLTASKIVVPEVV 149294
Score = 152 bits (327), Expect(2) = 4e-052
Identities = 76/134 (56%), Positives = 87/134 (64%)
Frame = +3 / +3
Query: 192 LHHVTGNVPTKS*SPKRQSVIPMPSLPGSQAATRASIFSKTCDSIINGLPDITITRVGIL 371
L+ V G++P KS*SPK SVIP PSLPG+ AATRAS+FS S GLPDI IT VGIL
Sbjct: 116451 LNQVIGSLPLKS*SPKITSVIPFPSLPGNHAATRASVFSNKPCSKTKGLPDIRITSVGIL 116630
Query: 372 LATRMIRSEPLNGILRSVLSPVHSAYGTSPTTTTA*ENPPVSIIASVGHFSYTTSVCTPT 551
A PLNGI S+LSP HSA G SP T A EN S+ + GHFSY TSV PT
Sbjct: 116631 SAIMSTIPAPLNGITSSLLSPPHSA*GASPIATMAKENSLHSMNSVDGHFSYITSVSCPT 116810
Query: 552 NSCMASNMLVPRVI 593
S AS ++VP V+
Sbjct: 116811 ASLTASKIVVPEVV 116852
Score = 129 bits (276), Expect(4) = 1e-091
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = -3 / +1
Query: 781 HRLLAREAVRKSLVLLKNGKDQNKPFLPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGD 602
HR LAREAVRKSLVLLKNGK+ +KPF+PL K+AKRILVAGTHA+DIGYQCGGWT +G
Sbjct: 149032 HRDLAREAVRKSLVLLKNGKEPSKPFIPLNKNAKRILVAGTHANDIGYQCGGWTFTKYGS 149211
Query: 601 SGKITLG 581
SG+IT+G
Sbjct: 149212 SGQITIG 149232
Score = 129 bits (276), Expect(4) = 5e-091
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = -3 / -2
Query: 781 HRLLAREAVRKSLVLLKNGKDQNKPFLPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGD 602
HR LAREAVRKSLVLLKNGK+ +KPF+PL K+AKRILVAGTHA+DIGYQCGGWT +G
Sbjct: 117255 HRDLAREAVRKSLVLLKNGKEPSKPFIPLNKNAKRILVAGTHANDIGYQCGGWTFTKYGS 117076
Query: 601 SGKITLG 581
SG+IT+G
Sbjct: 117075 SGQITIG 117055
Score = 88.6 bits (187), Expect(3) = 3e-023
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = -3 / -1
Query: 328 IIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQL 176
++E + EK EALVAAWLPGSEG GITD FGDHDF G LP+TW + ++QL
Sbjct: 110611 MLEQSLFEKTEALVAAWLPGSEGKGITDVFFGDHDFKGKLPMTWFRRIEQL 110459
Score = 86.3 bits (182), Expect(3) = 2e-057
Identities = 42/70 (60%), Positives = 44/70 (62%)
Frame = +3 / -3
Query: 582 PRVIFPLSPCHAIVQPPH*YPISSACVPATSILFASLANGRNGLF*SLPFFRSTKDLRTA 761
P VI+PL P V PPH* PIS A VPAT IL A L NG GL S PFF TKD RTA
Sbjct: 149231 PIVIWPLDPYLVNVHPPH**PISLA*VPATRILLAFLFNGMKGLLGSFPFFNKTKDFRTA 149052
Query: 762 SRASNRCSLQ 791
SRA + C Q
Sbjct: 149051 SRARSLCICQ 149022
Score = 84.9 bits (179), Expect(2) = 4e-052
Identities = 41/70 (58%), Positives = 43/70 (61%)
Frame = +3 / +2
Query: 582 PRVIFPLSPCHAIVQPPH*YPISSACVPATSILFASLANGRNGLF*SLPFFRSTKDLRTA 761
P VI+PL P V PPH* PIS A VPAT IL A L NG GL S PFF T D RTA
Sbjct: 117056 PIVIWPLDPYFVNVHPPH**PISLA*VPATRILLAFLFNGMKGLLGSFPFFNKTNDFRTA 117235
Query: 762 SRASNRCSLQ 791
SRA + C Q
Sbjct: 117236 SRARSLCICQ 117265
Score = 52.8 bits (109), Expect(4) = 1e-091
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -3 / +2
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVGCK 785
+ RILRVKFI+ +FE P +D+SLLDIVGCK
Sbjct: 147830 DDAVERILRVKFIAELFEFPLTDRSLLDIVGCK 147928
Score = 51.9 bits (107), Expect(3) = 3e-023
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = -2 / -1
Query: 755 SQVFGTSEKWQGSE*AIPSIGQRCKKNTGCRNTC**YWISMWWLDDSMAWRQWKNNSW 582
S+V G EKW+G+ * +I ++N C N+C**Y +SMW +D W W + +W
Sbjct: 117229 SKVVGFVEKWKGA**TFHTIE*ERQENPCCWNSC**YRLSMWRMDIYEVWI*WPDYNW 117056
Score = 50.6 bits (104), Expect(4) = 5e-091
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3 / -3
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVGCK 785
+ RILRVKFI+ +FE P +D+SLLD VGCK
Sbjct: 118211 DDAVERILRVKFIAELFEFPLTDRSLLDTVGCK 118113
Score = 29.0 bits (57), Expect(4) = 1e-091
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / +3
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P + +S DPLFP+GYGL
Sbjct: 149718 PSEGVNSCDDPLFPLGYGL 149774
Score = 29.0 bits (57), Expect(4) = 5e-091
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P + +S DPLFP+GYGL
Sbjct: 116428 PSEGVNSCDDPLFPLGYGL 116372
Score = 27.6 bits (54), Expect(3) = 3e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 148 DPLFPVGYGL 119
DPLFP+GYGL
Sbjct: 110422 DPLFPLGYGL 110393
Score = 22.6 bits (43), Expect(3) = 2e-057
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 118 LAHIQQGIAGH 150
LAH Q+GI GH
Sbjct: 149775 LAHNQEGIRGH 149743
>gb|BM779905.1|BM779905 EST590481 KV2 Medicago truncatula cDNA clone pKV2-53K12, mRNA
sequence
Length = 754
Score = 311 bits (674), Expect = 9e-084
Identities = 128/203 (63%), Positives = 164/203 (80%)
Frame = -3 / +1
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVGCKEHRLLAREAVRKSLVLLKNGKDQNKPF 704
+ RILRVKF +G+FE P SD+SLLDIVGCK HR LAREAVRKSLVLLKNGKD ++PF
Sbjct: 145 DDAVERILRVKFAAGLFEFPLSDRSLLDIVGCKPHRDLAREAVRKSLVLLKNGKDISEPF 324
Query: 703 LPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGDSGKITLGTSILEAIQELVGVQTEVVY 524
LPL K+AKRILV GTHAD++G+QCGGWT W+G SG+IT+G++IL+A++ VG +T+V+Y
Sbjct: 325 LPLNKNAKRILVTGTHADNLGFQCGGWTKTWYGASGRITVGSTILDAVKAAVGAETQVIY 504
Query: 523 EKCPTEAMIETGGFSYAVVVVGEVPYAEWTGDRTDLSIPFNGSDLIIRVASKIPTLVIVI 344
EK P++ IE FS+A+V VGE PYAE GD ++L+IPF G+D+I VA K PTLVI+I
Sbjct: 505 EKYPSQDTIERNEFSFAIVAVGEAPYAESLGDNSELTIPFRGTDIISLVADKFPTLVILI 684
Query: 343 SGRPLIIESQVLEKIEALVAAWL 275
SG L++E ++L KI+AL AAWL
Sbjct: 685 SG*ALVLEPRLLVKIDALGAAWL 753
Score = 216 bits (466), Expect = 4e-055
Identities = 108/203 (53%), Positives = 127/203 (62%)
Frame = +3 / -3
Query: 276 SQAATRASIFSKTCDSIINGLPDITITRVGILLATRMIRSEPLNGILRSVLSPVHSAYGT 455
+QAA RASIF+K+ S N PDI IT VG L AT++I S P GI+ S LSP SA G
Sbjct: 752 NQAAPRASIFTKSRGSKTNAYPDIKITNVGNLSATKLIISVPRKGIVSSELSPNDSA*GA 573
Query: 456 SPTTTTA*ENPPVSIIASVGHFSYTTSVCTPTNSCMASNMLVPRVIFPLSPCHAIVQPPH 635
SPT T A EN S+++ G+FS T V PT + AS ++ P VI PL+P +VQPPH
Sbjct: 572 SPTATIANENSLRSMVSCDGYFS*ITCVSAPTAALTASKIVEPTVILPLAPYQVLVQPPH 393
Query: 636 *YPISSACVPATSILFASLANGRNGLF*SLPFFRSTKDLRTASRASNRCSLQPTMSSRDW 815
* P SA VP T IL A L NGR G S PFF T D RTASRA + C LQPT+SS+D
Sbjct: 392 *NPRLSA*VPVTRILLAFLFNGRKGSLISFPFFNKTNDFRTASRARSLCGLQPTISSKDL 213
Query: 816 SENGCSNTPEINLTLRIRLVRDS 884
S NG SN P N TL+IR S
Sbjct: 212 SLNGNSNRPAANFTLKIRSTASS 144
>gb|BM779899.1|BM779899 EST590475 KV2 Medicago truncatula cDNA clone pKV2-53I24, mRNA
sequence
Length = 685
Score = 266 bits (575), Expect = 4e-070
Identities = 106/166 (63%), Positives = 136/166 (81%)
Frame = -3 / +2
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVGCKEHRLLAREAVRKSLVLLKNGKDQNKPF 704
+ RILRVKF +G+FE P SD+SLLDIVGCK HR LAREAVRKSLVLLKNGKD ++PF
Sbjct: 179 DDAVERILRVKFAAGLFEFPLSDRSLLDIVGCKPHRDLAREAVRKSLVLLKNGKDISEPF 358
Query: 703 LPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGDSGKITLGTSILEAIQELVGVQTEVVY 524
LPL K+AKRILV GTHAD++G+QCGGWT W+G SG+IT+G++IL+A++ VG +T+V+Y
Sbjct: 359 LPLNKNAKRILVTGTHADNLGFQCGGWTKTWYGASGRITVGSTILDAVKAAVGAETQVIY 538
Query: 523 EKCPTEAMIETGGFSYAVVVVGEVPYAEWTGDRTDLSIPFNGSDLI 386
EK P++ IE FS+A+V VGE PYAE GD ++L+IPF G+D+I
Sbjct: 539 EKYPSQDTIERNEFSFAIVAVGEAPYAESLGDNSELTIPFRGTDII 676
Score = 178 bits (384), Expect = 9e-044
Identities = 88/169 (52%), Positives = 104/169 (61%)
Frame = +3 / -2
Query: 378 TRMIRSEPLNGILRSVLSPVHSAYGTSPTTTTA*ENPPVSIIASVGHFSYTTSVCTPTNS 557
T++I S P GI+ S LSP SA G SPT T A EN S+++ G+FS T V PT +
Sbjct: 684 TKLIISVPRKGIVSSELSPNDSA*GASPTATIANENSLRSMVSCDGYFS*ITCVSAPTAA 505
Query: 558 CMASNMLVPRVIFPLSPCHAIVQPPH*YPISSACVPATSILFASLANGRNGLF*SLPFFR 737
AS ++ P VI PL+P +VQPPH* P SA VP T IL A L NGR G S PFF
Sbjct: 504 LTASKIVEPTVILPLAPYQVLVQPPH*NPRLSA*VPVTRILLAFLFNGRKGSLISFPFFN 325
Query: 738 STKDLRTASRASNRCSLQPTMSSRDWSENGCSNTPEINLTLRIRLVRDS 884
T D RTASRA + C LQPT+SS+D S NG SN P N TL+IR S
Sbjct: 324 KTNDFRTASRARSLCGLQPTISSKDLSLNGNSNRPAANFTLKIRSTASS 178
>gb|AW687058.1|AW687058 NF005E09RT1F1070 Developing root Medicago truncatula cDNA clone
NF005E09RT 5', mRNA sequence
Length = 653
Score = 159 bits (341), Expect(2) = 2e-059
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = -3 / +2
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVGCKEHRLLAREAVRKSLVLLKNGKDQNKPF 704
+ +RILRVKF+ G+FE+P +D SL D +G +EHR LAREAVRKSLVLLKNG++ +KP
Sbjct: 83 DDAVKRILRVKFVMGLFENPLADYSLADQLGSQEHRELAREAVRKSLVLLKNGENVDKPI 262
Query: 703 LPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGDSG 596
LPL K A +ILVAG+HAD++GYQCGGWTI W G SG
Sbjct: 263 LPLPKKASKILVAGSHADNLGYQCGGWTIQWQGQSG 370
Score = 104 bits (221), Expect(2) = 3e-027
Identities = 52/99 (52%), Positives = 61/99 (61%)
Frame = +3 / -3
Query: 588 VIFPLSPCHAIVQPPH*YPISSACVPATSILFASLANGRNGLF*SLPFFRSTKDLRTASR 767
++ PL PCH +V PPH*YP SA +PATSIL A L G GL PFF ST D TAS
Sbjct: 378 MLLPLCPCH*MVHPPH*YPRLSA*LPATSILEAFLGRGSIGLSTFSPFFNSTNDFLTASL 199
Query: 768 ASNRCSLQPTMSSRDWSENGCSNTPEINLTLRIRLVRDS 884
A++ CS P+ S+R S NG SN P NLTL+I S
Sbjct: 198 ANSLCSWLPS*SARL*SANGFSNRPITNLTLKILFTASS 82
Score = 92.3 bits (195), Expect(2) = 2e-059
Identities = 39/90 (43%), Positives = 59/90 (65%)
Frame = -3 / +2
Query: 592 ITLGTSILEAIQELVGVQTEVVYEKCPTEAMIETGGFSYAVVVVGEVPYAEWTGDRTDLS 413
IT GT IL AI+ V +T+V YE+ P+ +++ FSYA+V+VGE PYAE GD +L+
Sbjct: 377 ITTGTPILSAIKNAVDKETKVFYEENPSLDYVKSNDFSYAIVIVGETPYAETNGDSLNLT 556
Query: 412 IPFNGSDLIIRVASKIPTLVIVISGRPLII 323
I G + I V + +V++I+GRP++I
Sbjct: 557 ISGQGYETINNVCGVVKCVVVLITGRPIVI 646
Score = 39.6 bits (80), Expect(2) = 3e-027
Identities = 32/87 (36%), Positives = 39/87 (44%)
Frame = +3 / -3
Query: 333 GLPDITITRVGILLATRMIRSEPLNGILRSVLSPVHSAYGTSPTTTTA*ENPPVSIIASV 512
GLP I T T I S P I++ LSP SAYG SPT T A E ++
Sbjct: 636 GLPVINTTTHFTTPHTLFIVSYPCPEIVKFKLSPFVSAYGVSPTITIAYEKSLDFT*SNE 457
Query: 513 GHFSYTTSVCTPTNSCMASNMLVPRVI 593
G S T V T +A + VP V+
Sbjct: 456 GFSS*NTLVSLSTAFFIALRIGVPVVM 376
>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
sequence
Length = 123655
Score = 111 bits (237), Expect(4) = 4e-054
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = -3 / -3
Query: 787 KEHRLLAREAVRKSLVLLKNGKDQNKPFLPLAKDAKRILVAGTHADDIGYQCGGWTIAWH 608
+EH+ LAREAVRKS+VLLKNGK KP LPL K +ILVAG+HA+++GYQCGGWTI W
Sbjct: 77819 QEHKELAREAVRKSMVLLKNGKSAEKPLLPLPKKVPKILVAGSHANNLGYQCGGWTIEWQ 77640
Query: 607 GDSG 596
G +G
Sbjct: 77639 GVNG 77628
Score = 110 bits (235), Expect(2) = 2e-025
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = -3 / -2
Query: 355 VIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQL 176
V++I ++ + I+A+VA WLPGSEG G+ D LFGD+ F G LP TW KSVDQL
Sbjct: 77016 VVIIISGRPLVIEPYVGLIDAVVAGWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQL 76837
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P++ GD +YDP+FP G+GL
Sbjct: 76836 PMNVGDPHYDPVFPFGFGL 76780
Score = 107 bits (229), Expect(2) = 1e-030
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = -3 / -2
Query: 781 HRLLAREAVRKSLVLLKNGKDQNKPFLPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGD 602
HR LAR+AVRKS+VLLKNGK KP LPL K +ILVAG+HA+++G+QCGGWTI W G
Sbjct: 70773 HRELARDAVRKSMVLLKNGKSPEKPLLPLPKKVPKILVAGSHANNLGHQCGGWTIEWQGV 70594
Query: 601 SG 596
SG
Sbjct: 70593 SG 70588
Score = 99.6 bits (211), Expect(4) = 4e-054
Identities = 42/91 (46%), Positives = 61/91 (67%)
Frame = -3 / -2
Query: 583 GTSILEAIQELVGVQTEVVYEKCPTEAMIETGGFSYAVVVVGEVPYAEWTGDRTDLSIPF 404
GT+IL A++ V +T V+Y++ P + +E+ F YA+VVVGE PYAE GD +L+IP
Sbjct: 77241 GTTILNAVKNTVDPETTVIYKENPDKEFLESNEFCYAIVVVGEHPYAEMHGDNMNLTIPN 77062
Query: 403 NGSDLIIRVASKIPTLVIVISGRPLIIESQV 311
G ++I V + +VI+ISGRPL+IE V
Sbjct: 77061 PGPEIITNVCGAMKCVVIIISGRPLVIEPYV 76969
Score = 83.1 bits (175), Expect(4) = 1e-037
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +3 / +1
Query: 597 PLSPCHAIVQPPH*YPISSACVPATSILFASLANGRNGLF*SLPFFRSTKDLRTASRASN 776
PL+PCH++VQPPH*YP A +PATSI L G G LPFFR T D TAS AS+
Sbjct: 77629 PLTPCHSMVQPPH*YPRLFAWLPATSIFGTFLGRGNKGFSADLPFFRRTMDFLTASLASS 77808
Query: 777 RCS 785
CS
Sbjct: 77809 LCS 77817
Score = 77.1 bits (162), Expect(4) = 1e-037
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +3 / +2
Query: 114 IFSPYPTGNSGS*LESPASIGN*STDLHHVTGNVPTKS*SPKRQSVIPMPSLPGSQAATR 293
+ P P G +GS* SP IG+*ST L+HV G+ P K *SP + S P PSLPGSQ AT
Sbjct: 76775 VVRPNPNGKTGS**GSPTFIGS*STLLNHVLGSFPVKP*SPNKTSATPCPSLPGSQPATT 76954
Query: 294 ASI 302
ASI
Sbjct: 76955 ASI 76963
Score = 49.2 bits (101), Expect(4) = 1e-037
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +3 / +2
Query: 312 TCDSIINGLPDITITRVGILLATRMIRSEPLNGILRSVLSPVHSAYGTSPTTTTA*EN 485
T SI G P+I IT I T ++ S P GI++ +LSP SA G SPTTT A*+N
Sbjct: 76970 TYGSITKGRPEIMITTHFIAPQTFVMISGPGFGIVKFILSPCISA*GCSPTTTIA*QN 77143
Score = 47.3 bits (97), Expect(2) = 1e-030
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -3 / -2
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVGCK 785
+ RRILRVKF+ G+FE+PF+D SL+ +G K
Sbjct: 70974 DDAVRRILRVKFMMGIFENPFADYSLVKYLGIK 70876
Score = 47.3 bits (97), Expect(4) = 4e-054
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -3 / -2
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVGCK 785
+ RRILRVKF+ G+FE+PF+D SL+ +G K
Sbjct: 78015 DDAVRRILRVKFMMGIFENPFADYSLVKYLGIK 77917
Score = 38.2 bits (77), Expect(4) = 4e-054
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 203 DMV*VC*SIAYRCWRL*L*PAIPCWIW 123
+MV C*S + CWR L*P P W+W
Sbjct: 76864 NMVQKC*STSNECWRSSL*PRFPIWVW 76784
Score = 36.3 bits (73), Expect(2) = 2e-025
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -2
Query: 680 KNTGCRNTC**YWISMWWLDDSMAWRQWK 594
KNT R C * IS+WWLD MA QW+
Sbjct: 77712 KNTCGRKPCK*SRISVWWLDH*MARSQWQ 77626
Score = 31.3 bits (62), Expect(4) = 1e-037
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 821 KWMLKHSRNKLNPQNSS 871
KW+LK++ ++ NPQNSS
Sbjct: 77953 KWVLKNTHHEFNPQNSS 78003
>gb|BQ146788.1|BQ146788 NF028C08FL1F1065 Developing flower Medicago truncatula cDNA clone
NF028C08FL 5', mRNA sequence
Length = 604
Score = 153 bits (328), Expect(2) = 9e-052
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = -3 / +3
Query: 868 RILRVKFISGVFEHPFSDQSLLDIVGCKEHRLLAREAVRKSLVLLKNGKDQNKPFLPLAK 689
RILRVKF G+FE+P +D SL++ +G KEHR LAREAVRKSLVLLKNGK NKP LPL K
Sbjct: 102 RILRVKFTMGLFENPLADLSLINQLGSKEHRELAREAVRKSLVLLKNGKYANKPLLPLPK 281
Query: 688 DAKRILVAGTHADDIGYQCGGWTIAWHGDSG 596
A ++LVAG+HAD++G QCGGWTI W G SG
Sbjct: 282 KASKVLVAGSHADNLGNQCGGWTITWQGLSG 374
Score = 100 bits (214), Expect(2) = 7e-024
Identities = 47/90 (52%), Positives = 56/90 (62%)
Frame = +3 / -1
Query: 597 PLSPCHAIVQPPH*YPISSACVPATSILFASLANGRNGLF*SLPFFRSTKDLRTASRASN 776
PLSPC IV PPH* P SA +PAT A L G +GLF LPFF +T+D RTAS A++
Sbjct: 373 PLSPCQVIVHPPH*LPKLSA*LPATKTFEAFLGRGSSGLFAYLPFFSNTRDFRTASLANS 194
Query: 777 RCSLQPTMSSRDWSENGCSNTPEINLTLRI 866
CSL P R S +G S P +N TL+I
Sbjct: 193 LCSLLPNWFMRLRSASGFSKRPMVNFTLKI 104
Score = 72.5 bits (152), Expect(2) = 9e-052
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = -3 / +3
Query: 592 ITLGTSILEAIQELVGVQTEVVYEKCPTEAMIETGGFSYAVVVVGEVPYAEWTGDRTDLS 413
+T GT+IL+ I++ V TEVVY + P I++ FSYA+V+VGE PYAE GD +L+
Sbjct: 381 LTTGTTILDGIKQTVDPATEVVYNENPDANFIKSNKFSYAIVIVGEKPYAETFGDSLNLT 560
Query: 412 IPFNGSDLIIRV 377
I G I V
Sbjct: 561 IAEPGPSTITNV 596
Score = 31.3 bits (62), Expect(2) = 7e-024
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3 / -1
Query: 399 PLNGILRSVLSPVHSAYGTSPTTTTA*EN 485
P + I+R LSP SA G SPT T A*EN
Sbjct: 574 PGSAIVRFKLSPNVSA*GFSPTITMA*EN 488
>gb|BQ143777.1|BQ143777 NF058A09DT1F1069 Drought Medicago truncatula cDNA clone NF058A09DT
5', mRNA sequence
Length = 859
Score = 113 bits (241), Expect(2) = 8e-035
Identities = 43/64 (67%), Positives = 51/64 (79%)
Frame = -3 / +2
Query: 310 LEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQLPIDAGDSNYDPLFPV 131
L KI+ LVAAWLPGSEG G+ D LFGD+ F G L TW K+VDQLP++ GDS+YDPLFP
Sbjct: 272 LNKIDGLVAAWLPGSEGTGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDSHYDPLFPF 451
Query: 130 GYGL 119
G+GL
Sbjct: 452 GFGL 463
Score = 55.6 bits (115), Expect(2) = 8e-035
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -3 / +2
Query: 466 VVGEVPYAEWTGDRTDLSIPFNGSDLIIRVASKIPTLVIVISGRPLIIE 320
VVGE PYAE GD +L+I NG++ I V ++ +V++++GRP+ I+
Sbjct: 119 VVGETPYAETNGDSLNLTISGNGTETINNVCGRVKCVVVLVTGRPVAIQ 265
>gb|CG953701.1|CG953701 MBELK15TF mth2 Medicago truncatula genomic clone 80D5, DNA sequence
Length = 912
Score = 102 bits (217), Expect(2) = 5e-028
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = -3 / +2
Query: 787 KEHRLLAREAVRKSLVLLKNGKDQNKPFLPLAKDAKRILVAGTHADDIGYQCGGW 623
+EHR LAREAVRKSLVLLKNGK +KP LPL K A +ILVAG+HAD+IG QCGGW
Sbjct: 746 QEHRELAREAVRKSLVLLKNGKSSDKPILPLPKKAPKILVAGSHADNIGNQCGGW 910
Score = 43.7 bits (89), Expect(2) = 5e-028
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -3 / +3
Query: 883 ESRTRRILRVKFISGVFEHPFSDQSLLDIVG 791
+ +RILRVKF+ G+FE+P +D SL D +G
Sbjct: 558 DDAVKRILRVKFVMGLFENPLADYSLADQIG 650
>gb|AJ547914.1|AJ547914 AJ547914 MTAPHEU Medicago truncatula cDNA clone mtaehac110004b10,
mRNA sequence
Length = 573
Score = 121 bits (259), Expect = 2e-026
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -3 / -1
Query: 355 VIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQL 176
V+V+ I+ LEKIE LVA WLPGSEG G+ D LFGD+ F G LP TW K+VDQL
Sbjct: 351 VVVLISGRPIVIQPYLEKIEGLVAGWLPGSEGSGVADVLFGDYGFTGKLPRTWFKTVDQL 172
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P++ GDS+YDPLFP G+GL
Sbjct: 171 PMNVGDSHYDPLFPFGFGL 115
Score = 87.2 bits (184), Expect(2) = 9e-021
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = +3 / +2
Query: 111 NIFSPYPTGNSGS*LESPASIGN*STDLHHVTGNVPTKS*SPKRQSVIPMPSLPGSQAAT 290
++ P P GN GS* ESP IGN*ST L+HV G++P *SP + S P PSLPGSQ AT
Sbjct: 107 SVVRPNPNGNKGS**ESPTFIGN*STVLNHVLGSLPVNP*SPNKTSATPEPSLPGSQPAT 286
Query: 291 RASIFSK 311
SIFS+
Sbjct: 287 SPSIFSR 307
Score = 34.5 bits (69), Expect(2) = 9e-021
Identities = 22/50 (44%), Positives = 24/50 (48%)
Frame = +3 / +2
Query: 333 GLPDITITRVGILLATRMIRSEPLNGILRSVLSPVHSAYGTSPTTTTA*E 482
GLP I T T I P I++ LSP SAYG SPT T A E
Sbjct: 326 GLPLINTTTHFTTPHTLFIVPYPCPEIVKFKLSPFVSAYGVSPTITIACE 475
>gb|AJ548213.1|AJ548213 AJ548213 MTAPHEU Medicago truncatula cDNA clone mtaehac110004b12,
mRNA sequence
Length = 545
Score = 121 bits (259), Expect = 2e-026
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -3 / -3
Query: 355 VIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQL 176
V+V+ I+ LEKIE LVA WLPGSEG G+ D LFGD+ F G LP TW K+VDQL
Sbjct: 351 VVVLISGRPIVIQPYLEKIEGLVAGWLPGSEGSGVADVLFGDYGFTGKLPRTWFKTVDQL 172
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P++ GDS+YDPLFP G+GL
Sbjct: 171 PMNVGDSHYDPLFPFGFGL 115
Score = 87.2 bits (184), Expect(2) = 9e-021
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = +3 / +2
Query: 111 NIFSPYPTGNSGS*LESPASIGN*STDLHHVTGNVPTKS*SPKRQSVIPMPSLPGSQAAT 290
++ P P GN GS* ESP IGN*ST L+HV G++P *SP + S P PSLPGSQ AT
Sbjct: 107 SVVRPNPNGNKGS**ESPTFIGN*STVLNHVLGSLPVNP*SPNKTSATPEPSLPGSQPAT 286
Query: 291 RASIFSK 311
SIFS+
Sbjct: 287 SPSIFSR 307
Score = 34.5 bits (69), Expect(2) = 9e-021
Identities = 22/50 (44%), Positives = 24/50 (48%)
Frame = +3 / +2
Query: 333 GLPDITITRVGILLATRMIRSEPLNGILRSVLSPVHSAYGTSPTTTTA*E 482
GLP I T T I P I++ LSP SAYG SPT T A E
Sbjct: 326 GLPLINTTTHFTTPHTLFIVPYPCPEIVKFKLSPFVSAYGVSPTITIACE 475
>gb|CX523067.1|CX523067 s13dNF88C10VI082_471938 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 546
Score = 112 bits (240), Expect = 6e-024
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = -3 / +3
Query: 328 IIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQLPIDAGDSNY 149
++ L I+ALVAAWLPGSEG G+ D LFGD+ F G L TW KSVDQLP++ GD +Y
Sbjct: 87 VVIEPYLSSIDALVAAWLPGSEGQGVADVLFGDYGFTGKLARTWFKSVDQLPMNVGDPHY 266
Query: 148 DPLFPVGYGL 119
DPLFP G+GL
Sbjct: 267 DPLFPYGFGL 296
>gb|BG452923.1|BG452923 NF086F12LF1F1096 Developing leaf Medicago truncatula cDNA clone
NF086F12LF 5', mRNA sequence
Length = 655
Score = 112 bits (239), Expect = 9e-024
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = -3 / +2
Query: 355 VIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQL 176
V+V+ ++ L KI+ALVAAWLPG+EG G+ D L+GD +F G L TW K+VDQL
Sbjct: 185 VVVLVTGRPVVIQPYLSKIDALVAAWLPGTEGQGVADVLYGDFEFTGKLARTWFKTVDQL 364
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P++ GD +YDPLFP G+GL
Sbjct: 365 PMNVGDKHYDPLFPFGFGL 421
>gb|CX539956.1|CX539956 s13dNF43B05GS041_463184 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 601
Score = 112 bits (239), Expect = 9e-024
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = -3 / +1
Query: 355 VIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQL 176
V+V+ ++ L KI+ALVAAWLPG+EG G+ D L+GD +F G L TW K+VDQL
Sbjct: 43 VVVLVTGRPVVIQPYLSKIDALVAAWLPGTEGQGVADVLYGDFEFTGKLARTWFKTVDQL 222
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P++ GD +YDPLFP G+GL
Sbjct: 223 PMNVGDKHYDPLFPFGFGL 279
>gb|AJ548018.1|AJ548018 AJ548018 MTAPHEU Medicago truncatula cDNA clone mtaehac110003b06,
mRNA sequence
Length = 352
Score = 109 bits (232), Expect = 8e-023
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = -3 / -1
Query: 304 KIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQLPIDAGDSNYDPLFPVGY 125
KI+ALVAAWLPG+EG G+ D L+GD +F G L TW K+VDQLP++ GD +YDPLFP G+
Sbjct: 352 KIDALVAAWLPGTEGQGVADVLYGDFEFTGKLARTWFKTVDQLPMNVGDKHYDPLFPFGF 173
Query: 124 GL 119
GL
Sbjct: 172 GL 167
>gb|AW774529.1|AW774529 EST333680 KV3 Medicago truncatula cDNA clone pKV3-22J22, mRNA
sequence
Length = 450
Score = 108 bits (231), Expect = 1e-022
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = -3 / -3
Query: 355 VIVISGRPLIIESQVLEKIEALVAAWLPGSEGMGITDCLFGDHDFVGTLPVTWCKSVDQL 176
V++I ++ + I+A+VA WLPGSEG G+ D LFG++ F G LP TW KSVDQL
Sbjct: 397 VVIIISGRPLVIEPYVGLIDAVVAGWLPGSEGQGVADVLFGEYGFTGKLPRTWFKSVDQL 218
Query: 175 PIDAGDSNYDPLFPVGYGL 119
P++ GD +YDP+FP G+GL
Sbjct: 217 PMNVGDPHYDPVFPFGFGL 161
>emb|CR315610.1| mte1-4K11RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 591
Score = 107 bits (229), Expect = 2e-022
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = -3 / +1
Query: 781 HRLLAREAVRKSLVLLKNGKDQNKPFLPLAKDAKRILVAGTHADDIGYQCGGWTIAWHGD 602
HR LAR+AVRKS+VLLKNGK KP LPL K +ILVAG+HA+++G+QCGGWTI W G
Sbjct: 16 HRELARDAVRKSMVLLKNGKSPEKPLLPLPKKVPKILVAGSHANNLGHQCGGWTIEWQGV 195
Query: 601 SG 596
SG
Sbjct: 196 SG 201
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 986,680,001
Number of Sequences: 392609
Number of extensions: 15418860
Number of successful extensions: 69132
Number of sequences better than 1.0e-020: 19
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 30030549804
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)