TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2647895.2.1
         (709 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BQ164948.1|BQ164948  EST610817 KVKC Medicago truncatula c...   127   2e-028
gb|BI271829.1|BI271829  NF012D11FL1F1093 Developing flower M...   124   1e-027

>gb|BQ164948.1|BQ164948 EST610817 KVKC Medicago truncatula cDNA clone pKVKC-3H9, mRNA
           sequence
          Length = 778

 Score =  127 bits (272), Expect = 2e-028
 Identities = 53/126 (42%), Positives = 77/126 (61%)
 Frame = -1 / -1

                                                                       
Query: 634 EXELGDXXXDIXXXRQCVQAXKXXGFEVVFAKDLAQVFPCPWYRVMDPXXFSWAHFQCPR 455
           E E+GD   DI    +C++A K  GFEV++ KDLA   P PWY  +D   FS + F+   
Sbjct: 595 EIEIGDGLPDIRLTTKCLEALKQAGFEVIWEKDLASDSPLPWYLPLDKSHFSLSSFRLTA 416

                                                                       
Query: 454 PGRIVTRAIVNTLEFLRIAPAGSMGAYNVLMSASDGLLKGGREGIFTATFFVLGRKPLKE 275
            GR+ TR +V  LEF+ +AP GS    + L  A++GL++GG+  IFT  +F L RKP  E
Sbjct: 415 VGRLFTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVEGGKREIFTPMYFFLARKPASE 236

                 
Query: 274 ADIVNG 257
           ++ ++G
Sbjct: 235 SN*ISG 218



>gb|BI271829.1|BI271829 NF012D11FL1F1093 Developing flower Medicago truncatula cDNA clone
           NF012D11FL 5', mRNA sequence
          Length = 675

 Score =  124 bits (266), Expect = 1e-027
 Identities = 52/126 (41%), Positives = 76/126 (60%)
 Frame = -1 / +2

                                                                       
Query: 634 EXELGDXXXDIXXXRQCVQAXKXXGFEVVFAKDLAQVFPCPWYRVMDPXXFSWAHFQCPR 455
           E E+GD   DI    +C++A K  GFEV++ KDLA   P PWY  +D   FS + F+   
Sbjct: 188 EIEIGDGLPDIRLTTKCLEALKQAGFEVIWEKDLASDSPLPWYLPLDKSHFSLSSFRLTA 367

                                                                       
Query: 454 PGRIVTRAIVNTLEFLRIAPAGSMGAYNVLMSASDGLLKGGREGIFTATFFVLGRKPLKE 275
            GR+ TR +V  LEF+ +AP GS    + L  A++GL++GG+  IFT  +F L RKP   
Sbjct: 368 VGRLFTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVEGGKREIFTPMYFFLARKPASX 547

                 
Query: 274 ADIVNG 257
           ++ ++G
Sbjct: 548 SN*ISG 565



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 605,000,273
Number of Sequences: 392609
Number of extensions: 8916396
Number of successful extensions: 61072
Number of sequences better than 1.0e-020: 3
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 22813863545
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)