TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591194.2.1
(591 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG588598.1|BG588598 EST490407 MHRP- Medicago truncatula ... 160 2e-038
gb|CB893477.1|CB893477 EST646269 HOGA Medicago truncatula c... 159 4e-038
gb|AJ498106.1|AJ498106 AJ498106 MTPOSE Medicago truncatula ... 158 8e-038
gb|BI269644.1|BI269644 NF012D03IR1F1029 Irradiated Medicago... 157 2e-037
gb|BE239974.1|BE239974 EST404023 MHRP- Medicago truncatula ... 154 1e-036
gb|BQ148300.1|BQ148300 NF065H06FL1F1060 Developing flower M... 154 1e-036
gb|AC134967.20| Medicago truncatula clone mth2-26b8, comple... 154 1e-036
gb|AC169788.4| Medicago truncatula clone mth2-28c18, comple... 154 1e-036
gb|AC151708.6| Medicago truncatula clone mth2-15h5, complet... 154 1e-036
gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone m... 152 5e-036
gb|CG925890.1|CG925890 MBEJS57TRB mth2 Medicago truncatula ... 151 7e-036
gb|BE124256.1|BE124256 EST394381 DSIL Medicago truncatula c... 150 1e-035
gb|BF638251.1|BF638251 NF053F01PL1F1013 Phosphate starved l... 149 5e-035
gb|AW560522.1|AW560522 EST315570 DSIR Medicago truncatula c... 148 7e-035
gb|AJ497188.1|AJ497188 AJ497188 MTFLOW Medicago truncatula ... 146 2e-034
gb|AJ497191.1|AJ497191 AJ497191 MTFLOW Medicago truncatula ... 146 2e-034
gb|AJ497314.1|AJ497314 AJ497314 MTFLOW Medicago truncatula ... 146 2e-034
gb|CX541857.1|CX541857 s13dNF71F05GS047_467022 Germinating ... 146 2e-034
gb|AJ496988.1|AJ496988 AJ496988 MTFLOW Medicago truncatula ... 145 4e-034
emb|CR305502.1| mte1-25O5RM1 BAC end, cultivar Jemalong A17... 144 2e-033
gb|BE320334.2|BE320334 NF026F12RT1F1095 Developing root Med... 142 6e-033
gb|AL374609.1|AL374609 MtBB07F01R2 MtBB Medicago truncatula... 111 1e-032
gb|AL367397.1|AL367397 MtBA14G01F1 MtBA Medicago truncatula... 141 1e-032
gb|AC119416.15| Medicago truncatula clone mth2-31m16, compl... 139 3e-032
gb|BQ149050.1|BQ149050 NF087B07FL1F1060 Developing flower M... 134 1e-030
gb|CX539127.1|CX539127 s13dNF60D08GS062_461514 Germinating ... 119 3e-026
gb|AL375864.1|AL375864 MtBB19F01R1 MtBB Medicago truncatula... 118 8e-026
gb|CA922495.1|CA922495 EST640213 MTUS Medicago truncatula c... 112 4e-024
gb|AL377149.1|AL377149 MtBB29F10R1 MtBB Medicago truncatula... 112 5e-024
gb|AL375894.1|AL375894 MtBB19G08R1 MtBB Medicago truncatula... 100 6e-024
gb|BE239899.1|BE239899 EST403948 MHRP- Medicago truncatula ... 110 3e-023
gb|AW256707.1|AW256707 EST304844 KV2 Medicago truncatula cD... 109 4e-023
emb|CR505991.1| mth4-40C8RM1 BAC end, cultivar Jemalong A17... 105 6e-022
gb|CX541899.1|CX541899 s13dNF0BC06GS050_467106 Germinating ... 105 8e-022
>gb|BG588598.1|BG588598 EST490407 MHRP- Medicago truncatula cDNA clone pMHRP-53P2, mRNA
sequence
Length = 820
Score = 160 bits (343), Expect = 2e-038
Identities = 62/80 (77%), Positives = 70/80 (87%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ +AR T QVYP+SWTAIYM LDNVGMWN+RSE+W RQYLGQQFYLRVY+P+ S RDE P
Sbjct: 354 DTVARCTTQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPSKSLRDEYP 533
Query: 402 IPKNALLCGRASGRRTRPL* 343
+PKNALLCGRASGR TRP *
Sbjct: 534 VPKNALLCGRASGRVTRPF* 593
>gb|CB893477.1|CB893477 EST646269 HOGA Medicago truncatula cDNA clone HOGA-28A19, mRNA
sequence
Length = 961
Score = 159 bits (341), Expect = 4e-038
Identities = 64/80 (80%), Positives = 70/80 (87%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T QVYP+SWTAIYM LDNVGMWNVRSE WARQYLGQQFY+RVYS A S RDE P
Sbjct: 635 DAVSRSTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAGSIRDEYP 814
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKNALLCG+A GR TRPL*
Sbjct: 815 IPKNALLCGKAVGRETRPL* 874
Score = 103 bits (220), Expect = 2e-021
Identities = 49/72 (68%), Positives = 52/72 (72%)
Frame = +2 / -2
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLV P A PQ AF GIG+SS + A E TR *NC PRYC AQ S LTFHIPTLSS +*
Sbjct: 867 GLVSLPTALPQRRAFFGIGYSSLIDPASEYTRI*NCCPRYCRAQNSLLTFHIPTLSSAI* 688
Query: 530 IAVHD*GYTCNV 565
IAVHD GYTC V
Sbjct: 687 IAVHDLGYTCVV 652
>gb|AJ498106.1|AJ498106 AJ498106 MTPOSE Medicago truncatula cDNA clone mt--acc955201b06,
mRNA sequence
Length = 601
Score = 158 bits (339), Expect = 8e-038
Identities = 61/80 (76%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T QVYP+SWTAIY+PLDNVGMWN+RSE WARQYLGQQFY+RVY+ + S RDE P
Sbjct: 343 DAVSRSTTQVYPKSWTAIYVPLDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYP 522
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKNALLCGR +GR TRPL*
Sbjct: 523 IPKNALLCGRVTGRHTRPL* 582
Score = 105 bits (223), Expect = 8e-022
Identities = 53/85 (62%), Positives = 57/85 (67%)
Frame = +2 / -3
Query: 326 GSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHI 505
GS + QRG V P PQS+AFLGIG+SS + TR *NC PRYC AQ SDL FHI
Sbjct: 599 GS*VSHQRGRVCLPVTLPQSNAFLGIGYSSLSDVDVVYTRI*NCCPRYCRAQNSDLKFHI 420
Query: 506 PTLSSGM*IAVHD*GYTCNVYRAMA 580
PTLSSG *IAVHD GYT V R A
Sbjct: 419 PTLSSGT*IAVHDFGYT*VVERETA 345
>gb|BI269644.1|BI269644 NF012D03IR1F1029 Irradiated Medicago truncatula cDNA clone
NF012D03IR 5', mRNA sequence
Length = 495
Score = 157 bits (337), Expect = 2e-037
Identities = 61/80 (76%), Positives = 71/80 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T QVYP+SWTAIY+PLDNVGMWN+RSE WARQYLGQQFY+RVY+ + S RDE P
Sbjct: 28 DAVSRSTTQVYPKSWTAIYVPLDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYP 207
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKNALLCGRA+G TRPL*
Sbjct: 208 IPKNALLCGRATGXHTRPL* 267
Score = 108 bits (230), Expect = 9e-023
Identities = 55/91 (60%), Positives = 61/91 (67%)
Frame = +2 / -2
Query: 308 TNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLS 487
+N+ GS + QRG V P A PQS+AFLGIG+SS + TR *NC PRYC AQ S
Sbjct: 302 SNIDSCGS*VSHQRGRVCXPVALPQSNAFLGIGYSSLSDVDVVYTRI*NCCPRYCRAQNS 123
Query: 488 DLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
DL FHIPTLSSG *IAVHD GYT V R A
Sbjct: 122 DLKFHIPTLSSGT*IAVHDFGYT*VVERETA 30
>gb|BE239974.1|BE239974 EST404023 MHRP- Medicago truncatula cDNA clone pMHRP-41I6, mRNA
sequence
Length = 543
Score = 154 bits (331), Expect = 1e-036
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T QVYP SWTAIY+ LDNVGMWN+R+E WARQYLGQQFYLRVY+ + S RDE P
Sbjct: 139 DAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFP 318
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNA LCGRASGR TRPL*+
Sbjct: 319 IPKNARLCGRASGRHTRPL*A 381
Score = 104 bits (222), Expect = 1e-021
Identities = 52/79 (65%), Positives = 54/79 (68%)
Frame = +2 / -2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
QRG V P A PQ AF GIG SS E *TR+*NCWPRYC AQ S L FHIPTLSS
Sbjct: 377 QRGRVCLPLALPQRRAFFGIGNSSLIEVDAV*TRK*NCWPRYCRAQNSVLKFHIPTLSSA 198
Query: 524 M*IAVHD*GYTCNVYRAMA 580
*IAVH+*GYT V RA A
Sbjct: 197 T*IAVHE*GYT*VVQRATA 141
>gb|BQ148300.1|BQ148300 NF065H06FL1F1060 Developing flower Medicago truncatula cDNA clone
NF065H06FL 5', mRNA sequence
Length = 629
Score = 154 bits (331), Expect = 1e-036
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T QVYP SWTAIY+ LDNVGMWN+R+E WARQYLGQQFYLRVY+ + S RDE P
Sbjct: 199 DAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFP 378
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNA LCGRASGR TRPL*+
Sbjct: 379 IPKNARLCGRASGRHTRPL*A 441
Score = 104 bits (222), Expect = 1e-021
Identities = 52/79 (65%), Positives = 54/79 (68%)
Frame = +2 / -1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
QRG V P A PQ AF GIG SS E *TR+*NCWPRYC AQ S L FHIPTLSS
Sbjct: 437 QRGRVCLPLALPQRRAFFGIGNSSLIEVDAV*TRK*NCWPRYCRAQNSVLKFHIPTLSSA 258
Query: 524 M*IAVHD*GYTCNVYRAMA 580
*IAVH+*GYT V RA A
Sbjct: 257 T*IAVHE*GYT*VVQRATA 201
>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence
Length = 133030
Score = 154 bits (330), Expect = 1e-036
Identities = 59/73 (80%), Positives = 66/73 (90%)
Frame = -1 / -2
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP+SWTAIYM LDNVGMWN+RSE+W RQYLGQQFYLRVY+P+ S RDE P+PKNALL
Sbjct: 58494 MQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPSKSLRDEYPVPKNALL 58315
Query: 381 CGRASGRRTRPL* 343
CGRASGR TRP *
Sbjct: 58314 CGRASGRVTRPF* 58276
>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence
Length = 122876
Score = 154 bits (330), Expect = 1e-036
Identities = 59/73 (80%), Positives = 66/73 (90%)
Frame = -1 / +1
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP+SWTAIYM LDNVGMWN+RSE+W RQYLGQQFYLRVY+P+ S RDE P+PKNALL
Sbjct: 63211 MQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPSKSLRDEYPVPKNALL 63390
Query: 381 CGRASGRRTRPL* 343
CGRASGR TRP *
Sbjct: 63391 CGRASGRVTRPF* 63429
>gb|AC151708.6| Medicago truncatula clone mth2-15h5, complete sequence
Length = 86100
Score = 154 bits (330), Expect = 1e-036
Identities = 59/73 (80%), Positives = 66/73 (90%)
Frame = -1 / +1
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP+SWTAIYM LDNVGMWN+RSE+W RQYLGQQFYLRVY+P+ S RDE P+PKNALL
Sbjct: 74530 MQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPSKSLRDEYPVPKNALL 74709
Query: 381 CGRASGRRTRPL* 343
CGRASGR TRP *
Sbjct: 74710 CGRASGRVTRPF* 74748
>gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone mte1-33n12, complete
sequence
Length = 93219
Score = 152 bits (326), Expect = 5e-036
Identities = 59/72 (81%), Positives = 64/72 (88%)
Frame = -1 / -1
Query: 555 VYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCG 376
VYP+SW+A+YMPLDNVGMWNVRSE+WARQYLGQQFYLRVYSPANSWRDE PIP NAL CG
Sbjct: 38259 VYPKSWSAVYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPSNALRCG 38080
Query: 375 RASGRRTRPL*S 340
RA G R L*+
Sbjct: 38079 RAVGH*IRSL*A 38044
Score = 104 bits (222), Expect = 1e-021
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +2 / +2
Query: 365 PEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM*IAVHD 544
P ARP A LGIG+SS HE AGE TRR*NC P+Y AQ SDLTFHIPTLS GM A+HD
Sbjct: 38069 PTARPHRKALLGIGYSSLHELAGEYTRR*NCCPKY*RAQFSDLTFHIPTLSKGMYTALHD 38248
Query: 545 *GYT 556
GYT
Sbjct: 38249 LGYT 38260
>gb|CG925890.1|CG925890 MBEJS57TRB mth2 Medicago truncatula genomic clone 70J17, DNA
sequence
Length = 953
Score = 151 bits (325), Expect = 7e-036
Identities = 61/72 (84%), Positives = 64/72 (88%)
Frame = -1 / +1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP+SWTAIYM LDNVGMWNVRSE WARQYLGQQFY+RVYS A S RDE PIPKNALLC
Sbjct: 655 QVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAGSIRDEYPIPKNALLC 834
Query: 378 GRASGRRTRPL* 343
G+A GR TRPL*
Sbjct: 835 GKAVGRETRPL* 870
>gb|BE124256.1|BE124256 EST394381 DSIL Medicago truncatula cDNA clone pDSIL-13D11, mRNA
sequence
Length = 658
Score = 150 bits (323), Expect = 1e-035
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T QVYP SWT IY+ +DNVGMWN+R+E WARQYLGQQFYLRVY+ + S RDE P
Sbjct: 36 DAVARCTTQVYPYSWTGIYVGVDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFP 215
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IPKNA LCGRASGR TRPL*+
Sbjct: 216 IPKNARLCGRASGRHTRPL*A 278
>gb|BF638251.1|BF638251 NF053F01PL1F1013 Phosphate starved leaf Medicago truncatula cDNA
clone NF053F01PL 5', mRNA sequence
Length = 454
Score = 149 bits (319), Expect = 5e-035
Identities = 60/81 (74%), Positives = 68/81 (83%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+AR T QVYP SWTAIY+ LDNVGMWN+R+E WARQYLGQQFYLRVY+ + S RDE P
Sbjct: 181 DAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFP 360
Query: 402 IPKNALLCGRASGRRTRPL*S 340
IP NA LCG ASGR TRPL*+
Sbjct: 361 IPXNARLCGXASGRHTRPL*A 423
>gb|AW560522.1|AW560522 EST315570 DSIR Medicago truncatula cDNA clone pDSIR-27K4, mRNA
sequence
Length = 428
Score = 148 bits (318), Expect = 7e-035
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = -1 / -2
Query: 555 VYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCG 376
VYP+SW+AIY+PLDNVGMWN+RSE WARQYLGQQFY+RVY+ + S RDE PIPKNALLCG
Sbjct: 427 VYPKSWSAIYVPLDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPIPKNALLCG 248
Query: 375 RASGRRTRPL* 343
RA+GR TRPL*
Sbjct: 247 RATGRHTRPL* 215
Score = 103 bits (220), Expect = 2e-021
Identities = 51/83 (61%), Positives = 57/83 (68%)
Frame = +2 / +3
Query: 308 TNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLS 487
+N+ GS + QRG V P A PQS+AFLGIG+SS + TR *NC PRYC AQ S
Sbjct: 180 SNIDSCGS*VSHQRGRVCLPVALPQSNAFLGIGYSSLSDVDVVYTRI*NCCPRYCRAQNS 359
Query: 488 DLTFHIPTLSSGM*IAVHD*GYT 556
DL FHIPTLSSG *IA HD GYT
Sbjct: 360 DLKFHIPTLSSGT*IADHDFGYT 428
>gb|AJ497188.1|AJ497188 AJ497188 MTFLOW Medicago truncatula cDNA clone mt--abc955106a01,
mRNA sequence
Length = 470
Score = 146 bits (314), Expect = 2e-034
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ IAR T+QVYP+SWTA+YMPLDNVGMWNVRSE+WARQYLG QFYLRVYS NS RDE P
Sbjct: 230 DTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSSTNSLRDEYP 409
Query: 402 IPKNALLCGRASG 364
IP NAL CG+A G
Sbjct: 410 IPSNALQCGKAVG 448
Score = 108 bits (230), Expect = 9e-023
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = +2 / -3
Query: 365 PEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM*IAVHD 544
P A P SA LGIG+SS +EF E T R*N WP+YCLAQ SDLTFHIPTLS+GM AVHD
Sbjct: 447 PTALPH*SALLGIGYSSLNEFVDEYTLR*NWWPKYCLAQFSDLTFHIPTLSNGMYSAVHD 268
Query: 545 *GYTCNVYRAM 577
GYT V RA+
Sbjct: 267 FGYT*TVLRAI 235
>gb|AJ497191.1|AJ497191 AJ497191 MTFLOW Medicago truncatula cDNA clone mt--abc955106a04,
mRNA sequence
Length = 470
Score = 146 bits (314), Expect = 2e-034
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ IAR T+QVYP+SWTA+YMPLDNVGMWNVRSE+WARQYLG QFYLRVYS NS RDE P
Sbjct: 230 DTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSSTNSLRDEYP 409
Query: 402 IPKNALLCGRASG 364
IP NAL CG+A G
Sbjct: 410 IPSNALQCGKAVG 448
Score = 108 bits (230), Expect = 9e-023
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = +2 / -3
Query: 365 PEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM*IAVHD 544
P A P SA LGIG+SS +EF E T R*N WP+YCLAQ SDLTFHIPTLS+GM AVHD
Sbjct: 447 PTALPH*SALLGIGYSSLNEFVDEYTLR*NWWPKYCLAQFSDLTFHIPTLSNGMYSAVHD 268
Query: 545 *GYTCNVYRAM 577
GYT V RA+
Sbjct: 267 FGYT*TVLRAI 235
>gb|AJ497314.1|AJ497314 AJ497314 MTFLOW Medicago truncatula cDNA clone mt--abc955107g01,
mRNA sequence
Length = 470
Score = 146 bits (314), Expect = 2e-034
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ IAR T+QVYP+SWTA+YMPLDNVGMWNVRSE+WARQYLG QFYLRVYS NS RDE P
Sbjct: 230 DTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSSTNSLRDEYP 409
Query: 402 IPKNALLCGRASG 364
IP NAL CG+A G
Sbjct: 410 IPSNALQCGKAVG 448
Score = 108 bits (230), Expect = 9e-023
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = +2 / -3
Query: 365 PEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM*IAVHD 544
P A P SA LGIG+SS +EF E T R*N WP+YCLAQ SDLTFHIPTLS+GM AVHD
Sbjct: 447 PTALPH*SALLGIGYSSLNEFVDEYTLR*NWWPKYCLAQFSDLTFHIPTLSNGMYSAVHD 268
Query: 545 *GYTCNVYRAM 577
GYT V RA+
Sbjct: 267 FGYT*TVLRAI 235
>gb|CX541857.1|CX541857 s13dNF71F05GS047_467022 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 521
Score = 146 bits (314), Expect = 2e-034
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ IAR T+QVYP+SWTA+YMPLDNVGMWNVRSE+WARQYLG QFYLRVYS NS RDE P
Sbjct: 254 DTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSSTNSLRDEYP 433
Query: 402 IPKNALLCGRASG 364
IP NAL CG+A G
Sbjct: 434 IPSNALQCGKAVG 472
Score = 108 bits (230), Expect = 9e-023
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = +2 / -3
Query: 365 PEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM*IAVHD 544
P A P SA LGIG+SS +EF E T R*N WP+YCLAQ SDLTFHIPTLS+GM AVHD
Sbjct: 471 PTALPH*SALLGIGYSSLNEFVDEYTLR*NWWPKYCLAQFSDLTFHIPTLSNGMYSAVHD 292
Query: 545 *GYTCNVYRAM 577
GYT V RA+
Sbjct: 291 FGYT*TVLRAI 259
>gb|AJ496988.1|AJ496988 AJ496988 MTFLOW Medicago truncatula cDNA clone mt--abc955102g09,
mRNA sequence
Length = 512
Score = 145 bits (312), Expect = 4e-034
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = -1 / +3
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
L+VYP SWTAIY+ LDNVGMWN+R+E WARQYLGQQFYLRVY+ + S RDE PIPKNA L
Sbjct: 57 LKVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFPIPKNARL 236
Query: 381 CGRASGRRTRPL*S 340
CGRASGR TRPL*+
Sbjct: 237 CGRASGRHTRPL*A 278
Score = 102 bits (218), Expect = 4e-021
Identities = 49/73 (67%), Positives = 51/73 (69%)
Frame = +2 / -2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
QRG V P A PQ AF GIG SS E *TR+*NCWPRYC AQ S L FHIPTLSS
Sbjct: 274 QRGRVCLPLALPQRRAFFGIGNSSLIEVDAV*TRK*NCWPRYCRAQNSVLKFHIPTLSSA 95
Query: 524 M*IAVHD*GYTCN 562
*IAVH+*GYT N
Sbjct: 94 T*IAVHE*GYTFN 56
>emb|CR305502.1| mte1-25O5RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 575
Score = 144 bits (308), Expect = 2e-033
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / +3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP+SWTAIYM LDNVGMWNVRSE WARQYLGQQFY+RVYS A S RDE PIPKNALLC
Sbjct: 372 QVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAGSIRDEYPIPKNALLC 551
Query: 378 GRASGRRT 355
G+A GR T
Sbjct: 552 GKAVGRET 575
>gb|BE320334.2|BE320334 NF026F12RT1F1095 Developing root Medicago truncatula cDNA clone
NF026F12RT 5', mRNA sequence
Length = 429
Score = 142 bits (304), Expect = 6e-033
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ +AR T QVYP+SWTAIYM LDNVGMWN+RSE+W RQYLGQQFYLRVY+P+ S RDE P
Sbjct: 182 DTVARCTTQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPSKSLRDEYP 361
Query: 402 IPKNALLCG 376
+PKNALLCG
Sbjct: 362 VPKNALLCG 388
>gb|AL374609.1|AL374609 MtBB07F01R2 MtBB Medicago truncatula cDNA clone MtBB07F01 T7, mRNA
sequence
Length = 535
Score = 111 bits (237), Expect(2) = 1e-032
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANS 421
+A++R T QVYP+SWTAIYM LDNVGMWNVRSE WARQYLGQQFY+RVYS A S
Sbjct: 25 DAVSRSTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAGS 186
Score = 49.6 bits (102), Expect(2) = 1e-032
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / +2
Query: 414 DENPIPKNALLCGRASGRRTRPL* 343
DE PIPKNALLCG+A GR TRPL*
Sbjct: 194 DEYPIPKNALLCGKAVGRETRPL* 265
>gb|AL367397.1|AL367397 MtBA14G01F1 MtBA Medicago truncatula cDNA clone MtBA14G01 T3, mRNA
sequence
Length = 495
Score = 141 bits (302), Expect = 1e-032
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 546 QSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRAS 367
+SWTAIYM LDNVGMWNVRSE WARQYLGQQFY+RVYS A S RDE PIPKNALLCG+A
Sbjct: 479 KSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAGSIRDEYPIPKNALLCGKAV 300
Query: 366 GRRTRPL* 343
GR TRPL*
Sbjct: 299 GRETRPL* 276
>gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete sequence
Length = 120889
Score = 139 bits (299), Expect = 3e-032
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = -1 / +1
Query: 576 IARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIP 397
++ + QVYP+SWTA+YMPLDNVGMWNVRSE+WARQYLG QFYLRVYS NS RDE PIP
Sbjct: 45073 LSMFITQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSSTNSLRDEYPIP 45252
Query: 396 KNALLCGRASG 364
NAL CG+A G
Sbjct: 45253 SNALQCGKAVG 45285
Score = 108 bits (230), Expect = 9e-023
Identities = 46/65 (70%), Positives = 50/65 (76%)
Frame = +2 / -3
Query: 365 PEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM*IAVHD 544
P A P SA LGIG+SS +EF E T R*N WP+YCLAQ SDLTFHIPTLS+GM AVHD
Sbjct: 45284 PTALPH*SALLGIGYSSLNEFVDEYTLR*NWWPKYCLAQFSDLTFHIPTLSNGMYSAVHD 45105
Query: 545 *GYTC 559
GYTC
Sbjct: 45104 FGYTC 45090
>gb|BQ149050.1|BQ149050 NF087B07FL1F1060 Developing flower Medicago truncatula cDNA clone
NF087B07FL 5', mRNA sequence
Length = 595
Score = 134 bits (287), Expect = 1e-030
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = -1 / +1
Query: 540 WTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGR 361
WTAIY+ LDNVGMWN+R+E WARQYLGQQFYLRVY+ + S RDE PIPKNA LCGRASGR
Sbjct: 16 WTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSXRDEFPIPKNARLCGRASGR 195
Query: 360 RTRPL*S 340
TRPL*+
Sbjct: 196 HTRPL*A 216
>gb|CX539127.1|CX539127 s13dNF60D08GS062_461514 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 569
Score = 119 bits (255), Expect = 3e-026
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -1 / +2
Query: 519 LDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S 340
LDNVGMWN+R+E WARQYLGQQFYLRVY+ + S RDE PIPKNA LCGRASGR TRPL*+
Sbjct: 2 LDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFPIPKNARLCGRASGRHTRPL*A 181
>gb|AL375864.1|AL375864 MtBB19F01R1 MtBB Medicago truncatula cDNA clone MtBB19F01 T7, mRNA
sequence
Length = 525
Score = 118 bits (252), Expect = 8e-026
Identities = 48/57 (84%), Positives = 50/57 (87%)
Frame = -1 / +2
Query: 513 NVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL* 343
NVGMWNVRSE WARQYLGQQFY+RVYS A S RDE PIPKNALLCG+A GR TRPL*
Sbjct: 2 NVGMWNVRSEFWARQYLGQQFYMRVYSDAGSIRDEYPIPKNALLCGKAVGRETRPL* 172
>gb|CA922495.1|CA922495 EST640213 MTUS Medicago truncatula cDNA clone MTUS-54D10, mRNA
sequence
Length = 781
Score = 112 bits (240), Expect = 4e-024
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A R+T QVYP SWT I + LDN GMWN+RS W RQYLGQQ YLRV++ S R+E
Sbjct: 378 DAPTRHTAQVYPNSWTTILVSLDNQGMWNLRSAIWERQYLGQQLYLRVWTDQRSLRNEYN 199
Query: 402 IPKNALLCGRASG 364
IP N LLCG+ASG
Sbjct: 198 IPTNVLLCGKASG 160
>gb|AL377149.1|AL377149 MtBB29F10R1 MtBB Medicago truncatula cDNA clone MtBB29F10 T7, mRNA
sequence
Length = 525
Score = 112 bits (239), Expect = 5e-024
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+ R+T QVYP SWTAI + LDN GMWN+RS W RQYLGQQ YLRV++ + +E
Sbjct: 18 DALTRHTAQVYPNSWTAILVSLDNQGMWNLRSAIWERQYLGQQLYLRVWNAQRTAANEYD 197
Query: 402 IPKNALLCGRASG 364
IP NALLCG+A G
Sbjct: 198 IPNNALLCGKALG 236
>gb|AL375894.1|AL375894 MtBB19G08R1 MtBB Medicago truncatula cDNA clone MtBB19G08 T7, mRNA
sequence
Length = 541
Score = 100 bits (213), Expect(2) = 6e-024
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -1 / +1
Query: 498 NVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S 340
N+R+E WARQYLGQQFYLRVY+ + S RDE PIPKNA LCGRASGR TRPL*+
Sbjct: 73 NLRTEFWARQYLGQQFYLRVYTASTSIRDEFPIPKNARLCGRASGRHTRPL*A 231
Score = 31.3 bits (62), Expect(2) = 6e-024
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 564 TLQVYPQSWTAIYM 523
T QVYP SWTAIY+
Sbjct: 2 TTQVYPYSWTAIYV 43
>gb|BE239899.1|BE239899 EST403948 MHRP- Medicago truncatula cDNA clone pMHRP-38B10, mRNA
sequence
Length = 461
Score = 110 bits (234), Expect = 3e-023
Identities = 44/73 (60%), Positives = 52/73 (71%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A R+T QVYP SWT I + LDN GMWN+ S W RQYLGQQ YLRV++ S R+E
Sbjct: 172 DAPTRHTAQVYPNSWTTILVSLDNQGMWNLMSAIWERQYLGQQLYLRVWTDQRSLRNEYN 351
Query: 402 IPKNALLCGRASG 364
IP N LLCG+ASG
Sbjct: 352 IPTNVLLCGKASG 390
>gb|AW256707.1|AW256707 EST304844 KV2 Medicago truncatula cDNA clone KV2-5F13, mRNA
sequence
Length = 434
Score = 109 bits (233), Expect = 4e-023
Identities = 44/73 (60%), Positives = 52/73 (71%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A R+T QVYP SWT I + L N GMWN+RS W RQYLGQQ YLRV++ S R+E
Sbjct: 371 DAPTRHTAQVYPNSWTTILVSLHNQGMWNLRSAIWERQYLGQQLYLRVWTDQRSLRNEYN 192
Query: 402 IPKNALLCGRASG 364
IP N LLCG+ASG
Sbjct: 191 IPTNVLLCGKASG 153
>emb|CR505991.1| mth4-40C8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 529
Score = 105 bits (224), Expect = 6e-022
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = -1 / +1
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDE 409
+Q YP+SWTAIYM LDNVGMWN+RSE+W RQYLGQQFYL+VY+P+ S RD+
Sbjct: 355 VQDYPKSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLKVYTPSKSLRDD 507
>gb|CX541899.1|CX541899 s13dNF0BC06GS050_467106 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 562
Score = 105 bits (223), Expect = 8e-022
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+ R+T QVYP SWTAI + LDN GMWN+RS W RQYLGQQ YLRV++ + +E
Sbjct: 359 DALTRHTAQVYPNSWTAILVSLDNQGMWNLRSAIWERQYLGQQLYLRVWNAQRTAANEYD 538
Query: 402 IPKNALLC 379
IP NALLC
Sbjct: 539 IPNNALLC 562
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 448,084,345
Number of Sequences: 392609
Number of extensions: 4956720
Number of successful extensions: 31907
Number of sequences better than 1.0e-020: 41
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 18080355722
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)