TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521865.2.1
(638 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA922301.1|CA922301 EST640019 MTUS Medicago truncatula c... 264 1e-069
gb|CG940943.1|CG940943 MBELN63TF mth2 Medicago truncatula g... 258 8e-068
emb|CR485906.1| mth2-155E9FM2 BAC end, cultivar Jemalong A1... 258 8e-068
gb|CG948326.1|CG948326 MBEIJ89TR mth2 Medicago truncatula g... 216 2e-058
gb|CG967052.1|CG967052 MBELD67TR mth2 Medicago truncatula g... 210 2e-057
gb|CG947524.1|CG947524 MBEIW04TR mth2 Medicago truncatula g... 222 3e-057
gb|BM779156.1|BM779156 EST589731 KV2 Medicago truncatula cD... 216 2e-055
gb|BM779448.1|BM779448 EST590024 KV2 Medicago truncatula cD... 215 5e-055
gb|CX529380.1|CX529380 s13dNF90B12MJ093_244814 Methyl Jasmo... 211 7e-054
gb|AW693031.1|AW693031 NF058H11ST1F1000 Developing stem Med... 203 2e-051
gb|AL384546.1|AL384546 MtBC22H06R1 MtBC Medicago truncatula... 188 1e-046
gb|AJ621869.1|AJ621869 AJ621869 Medicago truncatula J5 root... 185 5e-046
gb|AL381926.1|AL381926 MtBC03H02R1 MtBC Medicago truncatula... 133 3e-030
gb|AL384491.1|AL384491 MtBC22E01R1 MtBC Medicago truncatula... 114 2e-024
gb|AL376292.1|AL376292 MtBB22F04R1 MtBB Medicago truncatula... 109 4e-023
gb|AL376276.1|AL376276 MtBB22E04R1 MtBB Medicago truncatula... 107 1e-022
>gb|CA922301.1|CA922301 EST640019 MTUS Medicago truncatula cDNA clone MTUS-52A7, mRNA
sequence
Length = 824
Score = 264 bits (570), Expect = 1e-069
Identities = 105/120 (87%), Positives = 116/120 (96%)
Frame = +2 / -1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA G+++VGNV+V E+AKIGEGCLIGPDVAIGPGC+VE GVRLSRCTVMRGVRIKKHACI
Sbjct: 695 LAGGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHACI 516
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*AL 361
S+SIIGWHSTVGQWAR+ENMTILGEDVHVCDE+YSNGGVVLPHKEIK++ILKPEIVM* L
Sbjct: 515 SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM*GL 336
Score = 147 bits (315), Expect(2) = 2e-038
Identities = 62/83 (74%), Positives = 68/83 (81%)
Frame = -3 / +1
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS RAH PTVEC PI+L EMQACFLIRTPR+TVQRESLTP ST PGP+ATSGP+R
Sbjct: 448 RIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDSTMQPGPIATSGPMR 627
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
PSPILA+S T T PT P A+
Sbjct: 628 HPSPILAVSSTITFPTMLDPPAN 696
Score = 120 bits (257), Expect = 2e-026
Identities = 52/117 (44%), Positives = 82/117 (70%)
Frame = -2 / +3
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
+SHD+L LQN L+L + N+T IAV+LIT+MNI +DSHIL+ PL +S +P +N +
Sbjct: 339 TSHDNLWLQNICLNLLVG*NHTTIAVNLITNMNIFSKDSHILHSSPLPDSGMPPNNTAGN 518
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNMCSS 8
ASM LD ++H AA KP+ L+N R++ +IR+N+T+ +N G +H ++ +N+ S+
Sbjct: 519 ASMFLDPDSSHYCAARKPNTRLNNAARTDSNIRSNETSLTNFGCFVHNNVPHNVRST 689
Score = 33.6 bits (67), Expect(2) = 2e-038
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -3 / +1
Query: 360 RAHMTISGFRMLDLISLCGR 301
R HMTISGFR+ LISL G+
Sbjct: 337 RPHMTISGFRIFVLISLWGK 396
>gb|CG940943.1|CG940943 MBELN63TF mth2 Medicago truncatula genomic clone 81K6, DNA sequence
Length = 925
Score = 258 bits (557), Expect = 8e-068
Identities = 103/118 (87%), Positives = 112/118 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G H++GNV+VHE+AKIGEGCLIGPDVAIGPGC +E GVRLS CTVMRGVRIKKHACI
Sbjct: 419 LASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHACI 598
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S+SIIGWHSTVGQWAR+ENMTILGEDVHV DEVYSNGGVVLPHKEIK+SIL PEIVM*
Sbjct: 599 SSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM* 772
Score = 172 bits (370), Expect = 5e-042
Identities = 76/118 (64%), Positives = 85/118 (72%)
Frame = -3 / -2
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISGFRML LISL G+ PRIVIFS RAH*PTVEC P+ML +MQ
Sbjct: 771 HMTISGFRMLVLISLWGKTTPPLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQ 592
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAPVAS 1
ACFLIRTPR+TVQ ESLTP S PGP+ATSGP+R PSPILA+SCT T P P+A+
Sbjct: 591 ACFLIRTPRITVQHESLTPDSIVQPGPIATSGPMRHPSPILAVSCTITFPKM*GPLAN 418
Score = 136 bits (291), Expect = 4e-031
Identities = 58/114 (50%), Positives = 84/114 (73%)
Frame = -2 / -1
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
+SHD LR+QNA D + +N+T IAV+ I +M+I +DSHIL+ CPLTNS*+P+D+A
Sbjct: 775 ASHDYLRIQNACFDFLVGQNHTTIAVNFIRYMDIFSKDSHILHTCPLTNS*MPSDDAAGY 596
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
ASMLL+ +++H SAA KP L++T R+N +IR+N+T+ +N LMH HI N+
Sbjct: 595 ASMLLNPNSSHYSAA*KPDT*LNSTARTNCNIRSNETSLANFSCLMHNHIPQNV 434
Score = 109 bits (233), Expect(2) = 2e-025
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +1 / +1
Query: 10 WSTCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQ 189
W + +C A*+ +WR +S W+*C +W+W+ R +AF LHC+AR + EACLH++Q
Sbjct: 427 WPSHFGECDCA*DS*NWRGMSHWT*CCNWSWLYY*VRCQAFMLHCNARSSD*EACLHIQQ 606
Query: 190 HYRLALNCWSMGTDREYDYP 249
H+R+A NCWSMGT EYDYP
Sbjct: 607 HHRMAFNCWSMGTCGEYDYP 666
Score = 27.2 bits (53), Expect(2) = 2e-025
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 283 QQWRCCSPT*RDQVKHSEA*DRHV 354
QQW C +Q KHSE+ D HV
Sbjct: 700 QQWWCGFAPQGNQNKHSESGDSHV 771
>emb|CR485906.1| mth2-155E9FM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 777
Score = 258 bits (557), Expect = 8e-068
Identities = 103/118 (87%), Positives = 112/118 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G H++GNV+VHE+AKIGEGCLIGPDVAIGPGC +E GVRLS CTVMRGVRIKKHACI
Sbjct: 419 LASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHACI 598
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S+SIIGWHSTVGQWAR+ENMTILGEDVHV DEVYSNGGVVLPHKEIK+SIL PEIVM*
Sbjct: 599 SSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM* 772
Score = 172 bits (370), Expect = 5e-042
Identities = 76/118 (64%), Positives = 85/118 (72%)
Frame = -3 / -1
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISGFRML LISL G+ PRIVIFS RAH*PTVEC P+ML +MQ
Sbjct: 771 HMTISGFRMLVLISLWGKTTPPLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQ 592
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAPVAS 1
ACFLIRTPR+TVQ ESLTP S PGP+ATSGP+R PSPILA+SCT T P P+A+
Sbjct: 591 ACFLIRTPRITVQHESLTPDSIVQPGPIATSGPMRHPSPILAVSCTITFPKM*GPLAN 418
Score = 136 bits (291), Expect = 4e-031
Identities = 58/114 (50%), Positives = 84/114 (73%)
Frame = -2 / -3
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
+SHD LR+QNA D + +N+T IAV+ I +M+I +DSHIL+ CPLTNS*+P+D+A
Sbjct: 775 ASHDYLRIQNACFDFLVGQNHTTIAVNFIRYMDIFSKDSHILHTCPLTNS*MPSDDAAGY 596
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
ASMLL+ +++H SAA KP L++T R+N +IR+N+T+ +N LMH HI N+
Sbjct: 595 ASMLLNPNSSHYSAA*KPDT*LNSTARTNCNIRSNETSLANFSCLMHNHIPQNV 434
Score = 109 bits (233), Expect(2) = 2e-025
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +1 / +1
Query: 10 WSTCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQ 189
W + +C A*+ +WR +S W+*C +W+W+ R +AF LHC+AR + EACLH++Q
Sbjct: 427 WPSHFGECDCA*DS*NWRGMSHWT*CCNWSWLYY*VRCQAFMLHCNARSSD*EACLHIQQ 606
Query: 190 HYRLALNCWSMGTDREYDYP 249
H+R+A NCWSMGT EYDYP
Sbjct: 607 HHRMAFNCWSMGTCGEYDYP 666
Score = 27.2 bits (53), Expect(2) = 2e-025
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 283 QQWRCCSPT*RDQVKHSEA*DRHV 354
QQW C +Q KHSE+ D HV
Sbjct: 700 QQWWCGFAPQGNQNKHSESGDSHV 771
>gb|CG948326.1|CG948326 MBEIJ89TR mth2 Medicago truncatula genomic clone 62O10, DNA
sequence
Length = 929
Score = 216 bits (466), Expect(2) = 2e-058
Identities = 84/97 (86%), Positives = 92/97 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G H++GNV+VHE+AKIGEGCLIGPDVAIGPGC +E GVRLS CTVMRGVRIKKHACI
Sbjct: 599 LASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHACI 778
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNG 292
S+SIIGWHSTVGQWAR+ENMTILGEDVHV DEVYSNG
Sbjct: 779 SSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNG 889
Score = 146 bits (314), Expect = 3e-034
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = -3 / -3
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS RAH*PTVEC P+ML +MQACFLIRTPR+TVQ ESLTP S PGP+ATSGP+R
Sbjct: 846 RIVIFSTRAH*PTVECHPMMLLDMQACFLIRTPRITVQHESLTPDSIVQPGPIATSGPMR 667
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
PSPILA+SCT T P P+A+
Sbjct: 666 HPSPILAVSCTITFPKM*GPLAN 598
Score = 110 bits (234), Expect = 3e-023
Identities = 47/91 (51%), Positives = 68/91 (74%)
Frame = -2 / -2
Query: 289 IAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DASMLLDTHAAHDSAAGKPHAVLH 110
IAV+ I +M+I +DSHIL+ CPLTNS*+P+D+A ASMLL+ +++H SAA KP L+
Sbjct: 886 IAVNFIRYMDIFSKDSHILHTCPLTNS*MPSDDAAGYASMLLNPNSSHYSAA*KPDT*LN 707
Query: 109 NTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
+T R+N +IR+N+T+ +N LMH HI N+
Sbjct: 706 STARTNCNIRSNETSLANFSCLMHNHIPQNV 614
Score = 109 bits (233), Expect = 4e-023
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +1 / +1
Query: 10 WSTCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQ 189
W + +C A*+ +WR +S W+*C +W+W+ R +AF LHC+AR + EACLH++Q
Sbjct: 607 WPSHFGECDCA*DS*NWRGMSHWT*CCNWSWLYY*VRCQAFMLHCNARSSD*EACLHIQQ 786
Query: 190 HYRLALNCWSMGTDREYDYP 249
H+R+A NCWSMGT EYDYP
Sbjct: 787 HHRMAFNCWSMGTCGEYDYP 846
Score = 30.9 bits (61), Expect(2) = 2e-058
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2 / +3
Query: 293 GVVLPHKEIKSSI 331
GVVLPHKEIK+SI
Sbjct: 891 GVVLPHKEIKTSI 929
>gb|CG967052.1|CG967052 MBELD67TR mth2 Medicago truncatula genomic clone 78L14, DNA
sequence
Length = 947
Score = 210 bits (454), Expect(2) = 2e-057
Identities = 82/95 (86%), Positives = 90/95 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G H++GNV+VHE+AKIGEGCLIGPDVAIGPGC +E GVRLS CTVMRGVRIKKHACI
Sbjct: 599 LASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHACI 778
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYS 286
S+SIIGWHSTVGQWAR+ENMTILGEDVHV DEVYS
Sbjct: 779 SSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYS 883
Score = 146 bits (314), Expect(2) = 4e-036
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = -3 / -3
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS RAH*PTVEC P+ML +MQACFLIRTPR+TVQ ESLTP S PGP+ATSGP+R
Sbjct: 846 RIVIFSTRAH*PTVECHPMMLLDMQACFLIRTPRITVQHESLTPDSIVQPGPIATSGPMR 667
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
PSPILA+SCT T P P+A+
Sbjct: 666 HPSPILAVSCTITFPKM*GPLAN 598
Score = 109 bits (233), Expect = 4e-023
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +1 / +1
Query: 10 WSTCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQ 189
W + +C A*+ +WR +S W+*C +W+W+ R +AF LHC+AR + EACLH++Q
Sbjct: 607 WPSHFGECDCA*DS*NWRGMSHWT*CCNWSWLYY*VRCQAFMLHCNARSSD*EACLHIQQ 786
Query: 190 HYRLALNCWSMGTDREYDYP 249
H+R+A NCWSMGT EYDYP
Sbjct: 787 HHRMAFNCWSMGTCGEYDYP 846
Score = 108 bits (230), Expect = 1e-022
Identities = 46/90 (51%), Positives = 67/90 (74%)
Frame = -2 / -2
Query: 286 AVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DASMLLDTHAAHDSAAGKPHAVLHN 107
AV+ I +M+I +DSHIL+ CPLTNS*+P+D+A ASMLL+ +++H SAA KP L++
Sbjct: 883 AVNFIRYMDIFSKDSHILHTCPLTNS*MPSDDAAGYASMLLNPNSSHYSAA*KPDT*LNS 704
Query: 106 TPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
T R+N +IR+N+T+ +N LMH HI N+
Sbjct: 703 TARTNCNIRSNETSLANFSCLMHNHIPQNV 614
Score = 33.1 bits (66), Expect(2) = 2e-057
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 296 VVLPHKEIKSSILKPEI 346
VVLPHKEIK+SIL EI
Sbjct: 895 VVLPHKEIKTSILNREI 945
Score = 25.8 bits (50), Expect(2) = 4e-036
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 348 TISGFRMLDLISLCGR 301
TIS FRML LISL G+
Sbjct: 947 TISRFRMLVLISLWGK 900
>gb|CG947524.1|CG947524 MBEIW04TR mth2 Medicago truncatula genomic clone 65B7, DNA sequence
Length = 899
Score = 222 bits (480), Expect = 3e-057
Identities = 87/100 (87%), Positives = 95/100 (95%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+G H++GNV+VHE+AKIGEGCLIGPDVAIGPGC +E GVRLS CTVMRGVRIKKHACI
Sbjct: 599 LASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKKHACI 778
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVV 301
S+SIIGWHSTVGQWAR+ENMTILGEDVHV DEVYSNGGVV
Sbjct: 779 SSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVV 898
Score = 146 bits (314), Expect = 3e-034
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = -3 / -3
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS RAH*PTVEC P+ML +MQACFLIRTPR+TVQ ESLTP S PGP+ATSGP+R
Sbjct: 846 RIVIFSTRAH*PTVECHPMMLLDMQACFLIRTPRITVQHESLTPDSIVQPGPIATSGPMR 667
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
PSPILA+SCT T P P+A+
Sbjct: 666 HPSPILAVSCTITFPKM*GPLAN 598
Score = 115 bits (246), Expect = 6e-025
Identities = 49/95 (51%), Positives = 71/95 (74%)
Frame = -2 / -2
Query: 301 NNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DASMLLDTHAAHDSAAGKPH 122
N+T IAV+ I +M+I +DSHIL+ CPLTNS*+P+D+A ASMLL+ +++H SAA KP
Sbjct: 898 NHTTIAVNFIRYMDIFSKDSHILHTCPLTNS*MPSDDAAGYASMLLNPNSSHYSAA*KPD 719
Query: 121 AVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
L++T R+N +IR+N+T+ +N LMH HI N+
Sbjct: 718 T*LNSTARTNCNIRSNETSLANFSCLMHNHIPQNV 614
Score = 109 bits (233), Expect = 4e-023
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +1 / +1
Query: 10 WSTCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQ 189
W + +C A*+ +WR +S W+*C +W+W+ R +AF LHC+AR + EACLH++Q
Sbjct: 607 WPSHFGECDCA*DS*NWRGMSHWT*CCNWSWLYY*VRCQAFMLHCNARSSD*EACLHIQQ 786
Query: 190 HYRLALNCWSMGTDREYDYP 249
H+R+A NCWSMGT EYDYP
Sbjct: 787 HHRMAFNCWSMGTCGEYDYP 846
>gb|BM779156.1|BM779156 EST589731 KV2 Medicago truncatula cDNA clone pKV2-51K19, mRNA
sequence
Length = 618
Score = 216 bits (467), Expect = 2e-055
Identities = 84/96 (87%), Positives = 93/96 (96%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA G+++VGNV+V E+AKIGEGCLIGPDVAIGPGC+VE GVRLSRCTVMRGVRIKKHACI
Sbjct: 329 LAGGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHACI 508
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSN 289
S+SIIGWHSTVGQWAR+ENMTILGEDVHVCDE+YSN
Sbjct: 509 SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN 616
Score = 147 bits (315), Expect = 2e-034
Identities = 62/83 (74%), Positives = 68/83 (81%)
Frame = -3 / -1
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS RAH PTVEC PI+L EMQACFLIRTPR+TVQRESLTP ST PGP+ATSGP+R
Sbjct: 576 RIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDSTMQPGPIATSGPMR 397
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
PSPILA+S T T PT P A+
Sbjct: 396 HPSPILAVSSTITFPTMLDPPAN 328
>gb|BM779448.1|BM779448 EST590024 KV2 Medicago truncatula cDNA clone pKV2-52A17, mRNA
sequence
Length = 623
Score = 215 bits (464), Expect = 5e-055
Identities = 83/96 (86%), Positives = 93/96 (96%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA G+++VGNV+V E+AKIGEGCLIGPDVAIGPGC+VE GV+LSRCTVMRGVRIKKHACI
Sbjct: 334 LAGGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVKLSRCTVMRGVRIKKHACI 513
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSN 289
S+SIIGWHSTVGQWAR+ENMTILGEDVHVCDE+YSN
Sbjct: 514 SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN 621
Score = 147 bits (315), Expect = 2e-034
Identities = 62/83 (74%), Positives = 68/83 (81%)
Frame = -3 / -1
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS RAH PTVEC PI+L EMQACFLIRTPR+TVQRESLTP ST PGP+ATSGP+R
Sbjct: 581 RIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDSTMQPGPIATSGPMR 402
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
PSPILA+S T T PT P A+
Sbjct: 401 HPSPILAVSSTITFPTMLDPPAN 333
>gb|CX529380.1|CX529380 s13dNF90B12MJ093_244814 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 629
Score = 211 bits (456), Expect = 7e-054
Identities = 84/92 (91%), Positives = 90/92 (97%)
Frame = +2 / -3
Query: 86 VAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVH 265
VAIGPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWAR+ENMTILGEDVH
Sbjct: 627 VAIGPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVH 448
Query: 266 VCDEVYSNGGVVLPHKEIKSSILKPEIVM*AL 361
VCDE+YSNGGVVLPHKEIK++ILKPEIVM* L
Sbjct: 447 VCDEIYSNGGVVLPHKEIKTNILKPEIVM*GL 352
Score = 109 bits (232), Expect(2) = 3e-027
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = -3 / +2
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMAT 85
RIVIFS RAH PTVEC PI+L EMQACFLIRTPR+TVQRESLTP ST PGP+AT
Sbjct: 464 RIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDSTMQPGPIAT 628
Score = 33.6 bits (67), Expect(2) = 3e-027
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -3 / +2
Query: 360 RAHMTISGFRMLDLISLCGR 301
R HMTISGFR+ LISL G+
Sbjct: 353 RPHMTISGFRIFVLISLWGK 412
>gb|AW693031.1|AW693031 NF058H11ST1F1000 Developing stem Medicago truncatula cDNA clone
NF058H11ST 5', mRNA sequence
Length = 657
Score = 203 bits (438), Expect = 2e-051
Identities = 80/88 (90%), Positives = 86/88 (97%)
Frame = +2 / -1
Query: 98 PGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVCDE 277
PGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWAR+ENMTILGEDVHVCDE
Sbjct: 657 PGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDE 478
Query: 278 VYSNGGVVLPHKEIKSSILKPEIVM*AL 361
+YSNGGVVLPHKEIK++ILKPEIVM* L
Sbjct: 477 IYSNGGVVLPHKEIKTNILKPEIVM*GL 394
Score = 98.7 bits (209), Expect(2) = 4e-024
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -3 / +2
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHP 100
RIVIFS RAH PTVEC PI+L EMQACFLIRTPR+TVQRESLTP ST P
Sbjct: 506 RIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDSTMQP 655
Score = 33.6 bits (67), Expect(2) = 4e-024
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -3 / +2
Query: 360 RAHMTISGFRMLDLISLCGR 301
R HMTISGFR+ LISL G+
Sbjct: 395 RPHMTISGFRIFVLISLWGK 454
>gb|AL384546.1|AL384546 MtBC22H06R1 MtBC Medicago truncatula cDNA clone MtBC22H06 T7, mRNA
sequence
Length = 550
Score = 188 bits (404), Expect = 1e-046
Identities = 75/81 (92%), Positives = 80/81 (98%)
Frame = +2 / +1
Query: 119 GVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGV 298
GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWAR+ENMTILGEDVHVCDE+YSNGGV
Sbjct: 4 GVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGV 183
Query: 299 VLPHKEIKSSILKPEIVM*AL 361
VLPHKEIK++ILKPEIVM* L
Sbjct: 184 VLPHKEIKTNILKPEIVM*GL 246
Score = 91.8 bits (194), Expect(3) = 6e-023
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -3 / -3
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTP 118
RIVIFS RAH PTVEC PI+L EMQACFLIRTPR+TVQRESLTP
Sbjct: 134 RIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTP 3
Score = 33.6 bits (67), Expect(3) = 6e-023
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -3 / -3
Query: 360 RAHMTISGFRMLDLISLCGR 301
R HMTISGFR+ LISL G+
Sbjct: 245 RPHMTISGFRIFVLISLWGK 186
Score = 22.1 bits (42), Expect(3) = 6e-023
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 637 FFFFFLIDT 611
FFFFFL++T
Sbjct: 524 FFFFFLMET 498
>gb|AJ621869.1|AJ621869 AJ621869 Medicago truncatula J5 roots Medicago truncatula cDNA
clone MtGmEs773, mRNA sequence
Length = 424
Score = 185 bits (399), Expect = 5e-046
Identities = 76/89 (85%), Positives = 80/89 (89%)
Frame = +2 / +2
Query: 89 AIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHV 268
A C +E GVRLS CTVMRGVRIKKHACIS+SIIGWHSTVGQWAR+ENMTILGEDVHV
Sbjct: 14 AAARACTIESGVRLSCCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHV 193
Query: 269 CDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
DEVYSNGGVVLPHKEIK+SIL PEIVM*
Sbjct: 194 SDEVYSNGGVVLPHKEIKTSILNPEIVM* 280
Score = 121 bits (259), Expect = 1e-026
Identities = 55/84 (65%), Positives = 59/84 (70%)
Frame = -3 / -2
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISGFRML LISL G+ PRIVIFS RAH*PTVEC P+ML +MQ
Sbjct: 279 HMTISGFRMLVLISLWGKTTPPLL*TSSDTWTSSPRIVIFSTRAH*PTVECHPMMLLDMQ 100
Query: 174 ACFLIRTPRMTVQRESLTPSSTTH 103
ACFLIRTPR+TVQ ESLTP S H
Sbjct: 99 ACFLIRTPRITVQHESLTPDSIVH 28
Score = 101 bits (216), Expect = 9e-021
Identities = 45/85 (52%), Positives = 64/85 (75%)
Frame = -2 / -1
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
+SHD LR+QNA D + +N+T IAV+ I +M+I +DSHIL+ CPLTNS*+P+D+A
Sbjct: 283 ASHDYLRIQNACFDFLVGQNHTTIAVNFIRYMDIFSKDSHILHTCPLTNS*MPSDDAAGY 104
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNT 104
ASMLL+ +++H SAA KP L++T
Sbjct: 103 ASMLLNPNSSHYSAA*KPDT*LNST 29
>gb|AL381926.1|AL381926 MtBC03H02R1 MtBC Medicago truncatula cDNA clone MtBC03H02 T7, mRNA
sequence
Length = 465
Score = 133 bits (285), Expect = 3e-030
Identities = 52/57 (91%), Positives = 56/57 (98%)
Frame = +2 / +2
Query: 191 IIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*AL 361
IIGWHSTVGQWAR+ENMTILGEDVHVCDE+YSNGGVVLPHKEIK++ILKPEIVM* L
Sbjct: 2 IIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM*GL 172
>gb|AL384491.1|AL384491 MtBC22E01R1 MtBC Medicago truncatula cDNA clone MtBC22E01 T7, mRNA
sequence
Length = 498
Score = 114 bits (243), Expect = 2e-024
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +2 / +1
Query: 212 VGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*AL 361
VGQWAR+ENMTILGEDVHVCDE+YSNGGVVLPHKEIK++ILKPEIVM* L
Sbjct: 1 VGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM*GL 150
>gb|AL376292.1|AL376292 MtBB22F04R1 MtBB Medicago truncatula cDNA clone MtBB22F04 T7, mRNA
sequence
Length = 520
Score = 109 bits (233), Expect = 4e-023
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +2 / +3
Query: 218 QWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*AL 361
QWAR+ENMTILGEDVHVCDE+YSNGGVVLPHKEIK++ILKPEIVM* L
Sbjct: 3 QWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNILKPEIVM*GL 146
>gb|AL376276.1|AL376276 MtBB22E04R1 MtBB Medicago truncatula cDNA clone MtBB22E04 T7, mRNA
sequence
Length = 521
Score = 107 bits (229), Expect = 1e-022
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +2 / +1
Query: 215 GQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*AL 361
GQWAR+ENMTILGEDVHVCDE+YSNGGVVLP KEIK++ILKPEIVM* L
Sbjct: 1 GQWARVENMTILGEDVHVCDEIYSNGGVVLPPKEIKTNILKPEIVM*GL 147
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 639,771,163
Number of Sequences: 392609
Number of extensions: 8737183
Number of successful extensions: 64259
Number of sequences better than 1.0e-020: 16
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19914864310
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)