TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521459.2.4
(760 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM780235.1|BM780235 EST590811 KV2 Medicago truncatula cD... 125 2e-071
gb|BI309356.1|BI309356 EST530766 GPOD Medicago truncatula c... 237 2e-061
gb|BG645286.1|BG645286 EST506905 KV3 Medicago truncatula cD... 227 2e-058
gb|CA919619.1|CA919619 EST637337 MTUS Medicago truncatula c... 215 9e-055
gb|AW774625.1|AW774625 EST333776 KV3 Medicago truncatula cD... 195 6e-049
gb|BI273174.1|BI273174 NF091B12FL1F1096 Developing flower M... 195 6e-049
gb|CX532800.1|CX532800 s13dNF71G05MJ036_271883 Methyl Jasmo... 192 7e-048
gb|BE204353.1|BE204353 EST397029 KV0 Medicago truncatula cD... 187 2e-046
gb|AW775842.1|AW775842 EST334907 DSIL Medicago truncatula c... 179 4e-044
gb|BF649665.1|BF649665 NF081H11EC1F1094 Elicited cell cultu... 171 8e-042
gb|AC128660.31| Medicago truncatula clone mth2-14p23, compl... 66 1e-033
gb|CA923174.1|CA923174 EST640892 MTUS Medicago truncatula c... 144 2e-033
gb|CA923195.1|CA923195 EST640913 MTUS Medicago truncatula c... 144 2e-033
gb|CX535226.1|CX535226 s13dNF95H11MJ096_388629 Methyl Jasmo... 133 4e-030
gb|BE204680.1|BE204680 EST397356 KV0 Medicago truncatula cD... 120 2e-026
gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone m... 113 3e-024
>gb|BM780235.1|BM780235 EST590811 KV2 Medicago truncatula cDNA clone pKV2-54M6, mRNA
sequence
Length = 818
Score = 125 bits (267), Expect(4) = 2e-071
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = -3 / -2
Query: 521 LCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHR 342
+CD CLQALS+RIHYGKFVAEAKFQ +P++Y AIIAQD+D+LM LLTY VE +I+ R
Sbjct: 553 VCDVMCLQALSKRIHYGKFVAEAKFQAAPDSYKAAIIAQDKDRLMELLTYPEVEESIKRR 374
Query: 341 VEAKAKIFGQEVNIGVED 288
V KAK +GQEV + ++D
Sbjct: 373 VAVKAKTYGQEVAVNLKD 320
Score = 100 bits (214), Expect(4) = 2e-071
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = -3 / -1
Query: 695 FFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSA 522
FF LPE LPP+QYP+VLHPIA+SININ +W +YF L+P+LVKEG DGN GSSA
Sbjct: 728 FFPTGLPEQLLPPLQYPQVLHPIAESININDNVWSVYFRVLIPQLVKEGDDGNYGSSA 555
Score = 77.1 bits (162), Expect(4) = 1e-044
Identities = 39/71 (54%), Positives = 47/71 (66%)
Frame = +1 / +3
Query: 307 TSCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WIL 486
TSCP +LA +TL I ST V ++ S S AI+A +* SG +*NLASATN P*WIL
Sbjct: 339 TSCP*VLAFTATLLLIDSSTSG*VSNSINLSLS*AIIAAL*ESGAA*NLASATNLP*WIL 518
Query: 487 LESACKQVVSQ 519
E ACK + SQ
Sbjct: 519 FERACKHITSQ 551
Score = 68.4 bits (143), Expect(4) = 1e-044
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = +1 / +1
Query: 523 ALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKK 696
A DP LPS PS TN G + KY I I+SA+GC T GYC GGN SGR + KK
Sbjct: 556 AEDP*LPSSPSLTNCGIRTLKYTLHTLSFIFIDSAIGCST*GYCKGGNNCSGRPVGKK 729
Score = 56.1 bits (116), Expect(4) = 2e-071
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = -3 / -3
Query: 275 PVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
PVYKI PSLVA+LYS IMPLTKEVQ+AY
Sbjct: 306 PVYKINPSLVADLYSDWIMPLTKEVQVAY 220
Score = 54.2 bits (112), Expect(4) = 1e-044
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +1 / +2
Query: 163 HTQSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGL 282
+ QSS L+KYA *TS V GMI LY SATKLG IL TG +
Sbjct: 194 YVQSSFLNKYAT*TSFVKGMIQSLYKSATKLGLIL*TGSV 313
Score = 46.4 bits (95), Expect(4) = 2e-071
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / -3
Query: 752 ETEKLHAQVGRYKGPDEHPFFS 687
ETEKL A+VGRYK DEHPFFS
Sbjct: 786 ETEKLQAKVGRYKSLDEHPFFS 721
Score = 37.7 bits (76), Expect(4) = 1e-044
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1 / +2
Query: 688 EKKGCSSGPLYLPTCAWSFSVS 753
EK GCSS LYLPT A SFSVS
Sbjct: 722 EKNGCSSRLLYLPTLA*SFSVS 787
>gb|BI309356.1|BI309356 EST530766 GPOD Medicago truncatula cDNA clone pGPOD-11O18 5' end,
mRNA sequence
Length = 567
Score = 237 bits (512), Expect = 2e-061
Identities = 93/127 (73%), Positives = 108/127 (85%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+VGRYK PDEHPFF LPE LPP+QYP+VLHPIA+SININ +W +YF L
Sbjct: 183 ETEKLHAKVGRYKSPDEHPFFPTGLPEQLLPPLQYPQVLHPIAESININDNVWSVYFRVL 362
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
+P+LVKEG DGN GSSA+CD CLQALS+RIHYGKFVAEAKFQ +P++Y AIIAQD+D+
Sbjct: 363 IPQLVKEGDDGNYGSSAVCDVMCLQALSKRIHYGKFVAEAKFQAAPDSYKAAIIAQDKDR 542
Query: 392 LMNLLTY 372
LM LLTY
Sbjct: 543 LMELLTY 563
Score = 154 bits (331), Expect = 1e-036
Identities = 73/119 (61%), Positives = 81/119 (68%)
Frame = +1 / -3
Query: 397 SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRS 576
S S AI+A +* SG +*NLASATN P*WIL E ACK + SQ A DP LPS PS TN G
Sbjct: 538 SLS*AIIAAL*ESGAA*NLASATNLP*WILFERACKHITSQTAEDP*LPSSPSLTNCGIR 359
Query: 577 SSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+ KY I I+SA+GC T GYC GGN SGR + K GCSSG LYLPT A SFSVS
Sbjct: 358 TLKYTLHTLSFIFIDSAIGCST*GYCKGGNNCSGRPVGKNGCSSGLLYLPTLA*SFSVS 182
>gb|BG645286.1|BG645286 EST506905 KV3 Medicago truncatula cDNA clone pKV3-39D20 5' end,
mRNA sequence
Length = 749
Score = 227 bits (490), Expect = 2e-058
Identities = 89/126 (70%), Positives = 105/126 (83%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+VGRYK PDEHPFF LPE LPP+QYP+VLHPIA+SININ +W +YF L
Sbjct: 372 ETEKLHAKVGRYKSPDEHPFFPTGLPEQLLPPLQYPQVLHPIAESININDNVWSVYFRVL 551
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQ 393
+P+LVKEG DGN GS A+CD CLQALS+RIHYGKF AEAKFQ +P++Y AIIAQD+D+
Sbjct: 552 IPQLVKEGDDGNYGSFAVCDVMCLQALSKRIHYGKFGAEAKFQAAPDSYKAAIIAQDKDR 731
Query: 392 LMNLLT 375
LM +LT
Sbjct: 732 LMEMLT 749
Score = 152 bits (326), Expect = 7e-036
Identities = 72/119 (60%), Positives = 80/119 (67%)
Frame = +1 / -2
Query: 397 SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRS 576
S S AI+A +* SG +*NLASA N P*WIL E ACK + SQ A DP LPS PS TN G
Sbjct: 727 SLS*AIIAAL*ESGAA*NLASAPNLP*WILFERACKHITSQTAKDP*LPSSPSLTNCGIR 548
Query: 577 SSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
+ KY I I+SA+GC T GYC GGN SGR + K GCSSG LYLPT A SFSVS
Sbjct: 547 TLKYTLHTLSFIFIDSAIGCST*GYCKGGNNCSGRPVGKNGCSSGLLYLPTLA*SFSVS 371
>gb|CA919619.1|CA919619 EST637337 MTUS Medicago truncatula cDNA clone MTUS-15H1, mRNA
sequence
Length = 606
Score = 215 bits (463), Expect = 9e-055
Identities = 90/134 (67%), Positives = 109/134 (81%)
Frame = -3 / -2
Query: 590 MYFDELLPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAII 411
+YF L+P+LVKEG DGN GSSA+CD CLQALS+RIHYGKFVAEAKFQ +P++Y AII
Sbjct: 602 VYFRVLIPQLVKEGDDGNYGSSAVCDVMCLQALSKRIHYGKFVAEAKFQAAPDSYKAAII 423
Query: 410 AQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPVYKIVPSLVAELYS 231
AQD+D+LM LLTY VE +I+ RV KAK +GQEV + ++D + PVYKI PSLVA+LYS
Sbjct: 422 AQDKDRLMELLTYPEVEESIKRRVAVKAKTYGQEVAVNLKDQKTEPVYKINPSLVADLYS 243
Query: 230 YRIMPLTKEVQIAY 189
IMPLTKEVQ+AY
Sbjct: 242 DWIMPLTKEVQVAY 201
Score = 147 bits (316), Expect = 2e-034
Identities = 79/142 (55%), Positives = 91/142 (64%)
Frame = +1 / +1
Query: 163 HTQSSLLSKYAI*TSLVSGMIL*LYSSATKLGTILYTGGLPLSSTPMFTSCPKILALAST 342
+ QSS L+KYA *TS V GMI LY SATKLG IL TG + S TSCP +LA +T
Sbjct: 175 YVQSSFLNKYAT*TSFVKGMIQSLYKSATKLGLIL*TGSVF*SFRFTATSCP*VLAFTAT 354
Query: 343 LCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQR 522
L I ST V ++ S S AI+A +* SG +*NLASATN P*WIL E ACK + SQ
Sbjct: 355 LLLIDSSTSG*VSNSINLSLS*AIIAAL*ESGAA*NLASATNLP*WILFERACKHITSQT 534
Query: 523 ALDPALPSLPSFTNLGRSSSKY 588
A DP LPS PS TN G + KY
Sbjct: 535 AEDP*LPSSPSLTNCGIRTLKY 600
>gb|AW774625.1|AW774625 EST333776 KV3 Medicago truncatula cDNA clone pKV3-23M13, mRNA
sequence
Length = 648
Score = 195 bits (421), Expect = 6e-049
Identities = 77/155 (49%), Positives = 110/155 (70%)
Frame = -3 / +1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TE + A+ GRYK P+E+PFF ++L +P + + LHP A SININK +WKMYF +LL
Sbjct: 109 TEIVQAKAGRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYFHDLL 288
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
P V G DGN +A D + LQA+S+R+HYGKFVAE KF+ESP+ Y P I ++D++ L
Sbjct: 289 PLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRSKDKEGL 468
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDN 285
M LLT+++VE ++ RVE KA +FGQ++++ D+
Sbjct: 469 MKLLTFKSVEEMVKKRVEKKATLFGQDISLNSSDD 573
Score = 111 bits (236), Expect = 2e-023
Identities = 67/147 (45%), Positives = 79/147 (53%)
Frame = +1 / -2
Query: 310 SCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILL 489
SCP +A STL ST+ V F++ S S + G *+ GDS N SATNFP* LL
Sbjct: 548 SCPNNVAFFSTLFFTISSTLLNVNNFINPSLSLDRIKGS*S*GDSLNFTSATNFP**TLL 369
Query: 490 ESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNR 669
E AC S A+ LPS P TN G S KYIF L +LIE+A GCK G
Sbjct: 368 EMACNNERSLAAVCA*LPSSPEATNNGSRS*KYIFHKDLFMLIEAAPGCKNFVKG*DGTS 189
Query: 670 GSGRSLEKKGCSSGPLYLPTCAWSFSV 750
+ + KKG SSG LYLP A + SV
Sbjct: 188 DNDKFSGKKGFSSGFLYLPALA*TISV 108
>gb|BI273174.1|BI273174 NF091B12FL1F1096 Developing flower Medicago truncatula cDNA clone
NF091B12FL 5', mRNA sequence
Length = 696
Score = 195 bits (421), Expect = 6e-049
Identities = 77/155 (49%), Positives = 110/155 (70%)
Frame = -3 / +2
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TE + A+ GRYK P+E+PFF ++L +P + + LHP A SININK +WKMYF +LL
Sbjct: 59 TEIVQAKAGRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYFHDLL 238
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
P V G DGN +A D + LQA+S+R+HYGKFVAE KF+ESP+ Y P I ++D++ L
Sbjct: 239 PLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRSKDKEGL 418
Query: 389 MNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDN 285
M LLT+++VE ++ RVE KA +FGQ++++ D+
Sbjct: 419 MKLLTFKSVEEMVKKRVEKKATLFGQDISLNSSDD 523
Score = 111 bits (236), Expect = 2e-023
Identities = 67/147 (45%), Positives = 79/147 (53%)
Frame = +1 / -1
Query: 310 SCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILL 489
SCP +A STL ST+ V F++ S S + G *+ GDS N SATNFP* LL
Sbjct: 498 SCPNNVAFFSTLFFTISSTLLNVNNFINPSLSLDRIKGS*S*GDSLNFTSATNFP**TLL 319
Query: 490 ESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNR 669
E AC S A+ LPS P TN G S KYIF L +LIE+A GCK G
Sbjct: 318 EMACNNERSLAAVCA*LPSSPEATNNGSRS*KYIFHKDLFMLIEAAPGCKNFVKG*DGTS 139
Query: 670 GSGRSLEKKGCSSGPLYLPTCAWSFSV 750
+ + KKG SSG LYLP A + SV
Sbjct: 138 DNDKFSGKKGFSSGFLYLPALA*TISV 58
>gb|CX532800.1|CX532800 s13dNF71G05MJ036_271883 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 666
Score = 192 bits (413), Expect = 7e-048
Identities = 75/149 (50%), Positives = 106/149 (71%)
Frame = -3 / +3
Query: 731 QVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRLVKE 552
Q GRYK P+E+PFF ++L +P + + LHP A SININK +WKMYF +LLP V
Sbjct: 171 QAGRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYFHDLLPLFVAS 350
Query: 551 GSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTY 372
G DGN +A D + LQA+S+R+HYGKFVAE KF+ESP+ Y P I ++D++ LM LLT+
Sbjct: 351 GDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRSKDKEGLMKLLTF 530
Query: 371 ETVERAIEHRVEAKAKIFGQEVNIGVEDN 285
++VE ++ RVE KA +FGQ++++ D+
Sbjct: 531 KSVEEMVKKRVEKKATLFGQDISLNSSDD 617
Score = 107 bits (228), Expect = 2e-022
Identities = 64/139 (46%), Positives = 75/139 (53%)
Frame = +1 / -3
Query: 310 SCPKILALASTLCSIARSTVSYVRRFMS*SRSWAIMAGV*ASGDS*NLASATNFP*WILL 489
SCP +A STL ST+ V F++ S S + G *+ GDS N SATNFP* LL
Sbjct: 592 SCPNNVAFFSTLFFTISSTLLNVNNFINPSLSLDRIKGS*S*GDSLNFTSATNFP**TLL 413
Query: 490 ESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNR 669
E AC S A+ LPS P TN G S KYIF L +LIE+A GCK G
Sbjct: 412 EMACNNERSLAAVCA*LPSSPEATNNGSRS*KYIFHKDLFMLIEAAPGCKNFVKG*DGTS 233
Query: 670 GSGRSLEKKGCSSGPLYLP 726
+ + KKG SSG LYLP
Sbjct: 232 DNDKFSGKKGFSSGFLYLP 176
>gb|BE204353.1|BE204353 EST397029 KV0 Medicago truncatula cDNA clone pKV0-15B16, mRNA
sequence
Length = 657
Score = 187 bits (403), Expect = 2e-046
Identities = 72/97 (74%), Positives = 82/97 (84%)
Frame = -3 / +2
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+VGRYK PDEHPFF LPE LPP+QYP+VLHPIA+SININ +W +YF L
Sbjct: 365 ETEKLHAKVGRYKSPDEHPFFPTGLPEQLLPPLQYPQVLHPIAESININDNVWSVYFRVL 544
Query: 572 LPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFV 462
+P+LVKEG DGN GSSA+CD CLQALS+RIHYGKFV
Sbjct: 545 IPQLVKEGDDGNYGSSAVCDVMCLQALSKRIHYGKFV 655
Score = 134 bits (287), Expect = 2e-030
Identities = 60/98 (61%), Positives = 65/98 (66%)
Frame = +1 / -1
Query: 460 ATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCK 639
ATN P*WIL E ACK + SQ A DP LPS PS TN G + KY I I+SA+GC
Sbjct: 657 ATNLP*WILFERACKHITSQTAEDP*LPSSPSLTNCGIRTLKYTLHTLSFIFIDSAIGCS 478
Query: 640 TLGYCIGGNRGSGRSLEKKGCSSGPLYLPTCAWSFSVS 753
T GYC GGN SGR + K GCSSG LYLPT A SFSVS
Sbjct: 477 T*GYCKGGNNCSGRPVGKNGCSSGLLYLPTLA*SFSVS 364
>gb|AW775842.1|AW775842 EST334907 DSIL Medicago truncatula cDNA clone pDSIL-3E8, mRNA
sequence
Length = 654
Score = 179 bits (386), Expect = 4e-044
Identities = 72/140 (51%), Positives = 99/140 (70%)
Frame = -3 / +1
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TE + A+ GRYK P+E+PFF ++L +P + + LHP A SININK +WKMYF +LL
Sbjct: 235 TEIVQAKAGRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYFHDLL 414
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
P V G DGN +A D + LQA+S+R+HYGKFVAE KF+ESP+ Y P I ++D++ L
Sbjct: 415 PLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRSKDKEGL 594
Query: 389 MNLLTYETVERAIEHRVEAK 330
M LLT+++VE ++ RVE K
Sbjct: 595 MKLLTFKSVEEMVKKRVEKK 654
>gb|BF649665.1|BF649665 NF081H11EC1F1094 Elicited cell culture Medicago truncatula cDNA
clone NF081H11EC 5', mRNA sequence
Length = 605
Score = 171 bits (369), Expect = 8e-042
Identities = 68/134 (50%), Positives = 95/134 (70%)
Frame = -3 / +2
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TE + A+ GRYK P+E+PFF ++L +P + + LHP A SININK +WKMYF +LL
Sbjct: 200 TEIVQAKAGRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYFHDLL 379
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQL 390
P V G DGN +A D + LQA+S+R+HYGKFVAE KF+ESP+ Y P I ++D++ L
Sbjct: 380 PLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRSKDKEXL 559
Query: 389 MNLLTYETVERAIE 348
M LLT+++VE ++
Sbjct: 560 MKLLTFKSVEXMVK 601
>gb|AC128660.31| Medicago truncatula clone mth2-14p23, complete sequence
Length = 99170
Score = 66.1 bits (138), Expect(5) = 1e-033
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = -3 / +1
Query: 638 LHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQ 498
LHP A SININK +WKMYF +LLP V G DGN +A D + LQ
Sbjct: 59719 LHPGAASININKSLWKMYFHDLLPLFVASGDDGNYAQTAASDLSLLQ 59859
Score = 57.9 bits (120), Expect(5) = 1e-033
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -3 / +1
Query: 512 TTCLQALSRRIHYGKFVAEAKFQESPEAYTPAI 414
T LQA+S+R+HYGKFVAE KF+ESP+ Y P I
Sbjct: 60214 TRYLQAISKRVHYGKFVAEVKFRESPQDYEPLI 60312
Score = 48.3 bits (99), Expect(5) = 1e-033
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = -3 / +1
Query: 404 DRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDN 285
D++ LM LLT+++VE ++ RVE KA +FGQ++++ D+
Sbjct: 61117 DKEGLMKLLTFKSVEEMVKKRVEKKATLFGQDISLNSSDD 61236
Score = 40.9 bits (83), Expect(5) = 1e-033
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3 / +1
Query: 731 QVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLH 633
Q GRYK P+E+PFF ++L +P + +V+H
Sbjct: 59533 QAGRYKNPEENPFFPENLSLSLVPSYPFTKVIH 59631
Score = 35.0 bits (70), Expect(5) = 1e-033
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3 / +1
Query: 266 KIVPSLVAELYSYRIMPLTKEVQIAY 189
K PS+ ++LY ++PLTKEVQ+ Y
Sbjct: 61252 KFDPSVASKLYEKWVIPLTKEVQVEY 61329
>gb|CA923174.1|CA923174 EST640892 MTUS Medicago truncatula cDNA clone MTUS-64A11, mRNA
sequence
Length = 704
Score = 144 bits (308), Expect = 2e-033
Identities = 62/105 (59%), Positives = 76/105 (72%)
Frame = -3 / -3
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAK 324
LQALS+RIHYGKFVAEAKFQE P Y AI A+DR +L+ LLTYE+VE +++ RVE KA+
Sbjct: 585 LQALSKRIHYGKFVAEAKFQECPSVYEAAIKAKDRKRLLELLTYESVEESVQKRVEMKAR 406
Query: 323 IFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
F QEV I + + PVY+I L+ LY IMPLTKEVQ+ Y
Sbjct: 405 TFSQEVKINEAGDVADPVYRIKSGLIGNLYGKWIMPLTKEVQVEY 271
>gb|CA923195.1|CA923195 EST640913 MTUS Medicago truncatula cDNA clone MTUS-64D12, mRNA
sequence
Length = 803
Score = 144 bits (308), Expect = 2e-033
Identities = 62/105 (59%), Positives = 76/105 (72%)
Frame = -3 / -2
Query: 503 LQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAK 324
LQALS+RIHYGKFVAEAKFQE P Y AI A+DR +L+ LLTYE+VE +++ RVE KA+
Sbjct: 586 LQALSKRIHYGKFVAEAKFQECPSVYEAAIKAKDRKRLLELLTYESVEESVQKRVEMKAR 407
Query: 323 IFGQEVNIGVEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAY 189
F QEV I + + PVY+I L+ LY IMPLTKEVQ+ Y
Sbjct: 406 TFSQEVKINEAGDVADPVYRIKSGLIGNLYGKWIMPLTKEVQVEY 272
>gb|CX535226.1|CX535226 s13dNF95H11MJ096_388629 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 561
Score = 133 bits (284), Expect = 4e-030
Identities = 53/100 (53%), Positives = 69/100 (69%)
Frame = -3 / +3
Query: 749 TEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELL 570
TE + A+ GRYK P+E+PFF ++L +P + + LHP A SININK +WKMYF +LL
Sbjct: 261 TEIVQAKAGRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYFHDLL 440
Query: 569 PRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAK 450
P V G DGN +A D + LQA+S+R+HYGKFVAE K
Sbjct: 441 PLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVK 560
>gb|BE204680.1|BE204680 EST397356 KV0 Medicago truncatula cDNA clone pKV0-17G21, mRNA
sequence
Length = 565
Score = 120 bits (257), Expect = 2e-026
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = -3 / +3
Query: 752 ETEKLHAQVGRYKGPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDEL 573
ETEKLHA+VGRYK PDEHPFF LPE LPP+QYP+VLHPIA+SININ +W +YF L
Sbjct: 372 ETEKLHAKVGRYKSPDEHPFFPTGLPEQLLPPLQYPQVLHPIAESININDNVWSVYFRVL 551
Query: 572 LPRL 561
+P+L
Sbjct: 552 IPQL 563
>gb|AC147482.2| Medicago truncatula chromosome 7 BAC clone mth2-93e11, complete sequence
Length = 119127
Score = 113 bits (242), Expect = 3e-024
Identities = 50/87 (57%), Positives = 64/87 (73%)
Frame = -3 / -3
Query: 449 FQESPEAYTPAIIAQDRDQLMNLLTYETVERAIEHRVEAKAKIFGQEVNIGVEDNGSPPV 270
F +S + A+I QD+D+LM LLTY VE +I+ RV KAK +GQEV + ++D + PV
Sbjct: 117496 FAKSTQLSFTAMILQDKDRLMELLTYPEVEESIKRRVAVKAKTYGQEVAVNLKDQKTEPV 117317
Query: 269 YKIVPSLVAELYSYRIMPLTKEVQIAY 189
YKI PSLVA+LYS IMPLTKEVQ+AY
Sbjct: 117316 YKINPSLVADLYSDWIMPLTKEVQVAY 117236
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 879,895,933
Number of Sequences: 392609
Number of extensions: 13834257
Number of successful extensions: 67641
Number of sequences better than 1.0e-020: 19
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 24956602110
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)