TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478113.2.1
(796 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW559437.1|AW559437 EST314485 DSIR Medicago truncatula c... 193 3e-048
gb|BF632934.1|BF632934 NF046E11DT1F1087 Drought Medicago tr... 193 3e-048
gb|BF635025.1|BF635025 NF078F08DT1F1074 Drought Medicago tr... 193 3e-048
gb|BG451908.1|BG451908 NF101D03DT1F1027 Drought Medicago tr... 193 3e-048
gb|BG454042.1|BG454042 NF105A01LF1F1001 Developing leaf Med... 193 3e-048
gb|BQ123507.1|BQ123507 EST609083 GLSD Medicago truncatula c... 193 3e-048
gb|BQ123589.1|BQ123589 EST609165 GLSD Medicago truncatula c... 193 3e-048
gb|BQ165245.1|BQ165245 EST611114 KVKC Medicago truncatula c... 193 3e-048
gb|CF068416.1|CF068416 EST669137 MTUS Medicago truncatula c... 193 3e-048
gb|CF068424.1|CF068424 EST669145 MTUS Medicago truncatula c... 193 3e-048
gb|CX541723.1|CX541723 s13dNF91F11GS095_466748 Germinating ... 193 3e-048
gb|BQ122641.1|BQ122641 EST608217 GLSD Medicago truncatula c... 191 1e-047
gb|AJ846398.1|AJ846398 AJ846398 MtSCF Medicago truncatula c... 183 2e-045
gb|CA917721.1|CA917721 EST641868 GPOD Medicago truncatula c... 138 1e-031
gb|CX521899.1|CX521899 s13dNF1FE12VI099_469602 Virus-Infect... 138 1e-031
gb|CX523689.1|CX523689 s13dNF02G07AT054_322762 Aphid-Infect... 138 1e-031
gb|DW017475.1|DW017475 EST1226436 MTY Medicago truncatula c... 138 1e-031
gb|CA919102.1|CA919102 EST636820 MTUS Medicago truncatula c... 137 3e-031
gb|CX539846.1|CX539846 s13dNF0HH01GS012_462964 Germinating ... 136 5e-031
gb|AW687624.2|AW687624 NF011F05RT1F1046 Developing root Med... 133 3e-030
emb|CR485759.1| mth2-154H16FM2 BAC end, cultivar Jemalong A... 79 5e-029
gb|AJ497137.1|AJ497137 AJ497137 MTFLOW Medicago truncatula ... 125 1e-027
gb|BI310113.1|BI310113 EST5311863 GESD Medicago truncatula ... 100 6e-027
>gb|AW559437.1|AW559437 EST314485 DSIR Medicago truncatula cDNA clone pDSIR-19G21, mRNA
sequence
Length = 781
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +2
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 158 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 337
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 338 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 469
>gb|BF632934.1|BF632934 NF046E11DT1F1087 Drought Medicago truncatula cDNA clone NF046E11DT
5', mRNA sequence
Length = 548
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +2
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 155 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 334
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 335 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 466
>gb|BF635025.1|BF635025 NF078F08DT1F1074 Drought Medicago truncatula cDNA clone NF078F08DT
5', mRNA sequence
Length = 683
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +3
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 123 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 302
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 303 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 434
>gb|BG451908.1|BG451908 NF101D03DT1F1027 Drought Medicago truncatula cDNA clone NF101D03DT
5', mRNA sequence
Length = 656
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +1
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 157 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 336
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 337 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 468
>gb|BG454042.1|BG454042 NF105A01LF1F1001 Developing leaf Medicago truncatula cDNA clone
NF105A01LF 5', mRNA sequence
Length = 663
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +2
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 161 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 340
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 341 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 472
>gb|BQ123507.1|BQ123507 EST609083 GLSD Medicago truncatula cDNA clone pGLSD-32D11, mRNA
sequence
Length = 469
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +1
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 103 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 282
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 283 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 414
>gb|BQ123589.1|BQ123589 EST609165 GLSD Medicago truncatula cDNA clone pGLSD-32D12, mRNA
sequence
Length = 426
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +3
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 99 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 278
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 279 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 410
>gb|BQ165245.1|BQ165245 EST611114 KVKC Medicago truncatula cDNA clone pKVKC-7C3, mRNA
sequence
Length = 847
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +3
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 156 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 335
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 336 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 467
>gb|CF068416.1|CF068416 EST669137 MTUS Medicago truncatula cDNA clone MTUS-7F9, mRNA
sequence
Length = 476
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +2
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 107 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 286
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 287 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 418
>gb|CF068424.1|CF068424 EST669145 MTUS Medicago truncatula cDNA clone MTUS-7G8, mRNA
sequence
Length = 771
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +1
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 112 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 291
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 292 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 423
>gb|CX541723.1|CX541723 s13dNF91F11GS095_466748 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 590
Score = 193 bits (416), Expect = 3e-048
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = -2 / +3
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 117 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 296
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 297 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 428
>gb|BQ122641.1|BQ122641 EST608217 GLSD Medicago truncatula cDNA clone pGLSD-29J9, mRNA
sequence
Length = 543
Score = 191 bits (412), Expect = 1e-047
Identities = 72/104 (69%), Positives = 90/104 (86%)
Frame = -2 / +1
Query: 615 MGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLL 436
M KLWT++T LHSLAGP V LLYPLYASV A+ESPSKLDDEQWLAYWI+YSF+TL EML+
Sbjct: 100 MTKLWTLITQLHSLAGPVVTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLM 279
Query: 435 ESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
+ + WIPIWY++KLL AWLVLP F GAA++Y++FVR+ +R++
Sbjct: 280 QPALEWIPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIREY 411
>gb|AJ846398.1|AJ846398 AJ846398 MtSCF Medicago truncatula cDNA clone MtCF02F21S6, mRNA
sequence
Length = 778
Score = 183 bits (395), Expect = 2e-045
Identities = 69/105 (65%), Positives = 88/105 (83%)
Frame = -2 / -3
Query: 618 RMGKLWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEML 439
+M KLW +T L+S+AGP +MLLYPLYASV A+ES SK+DDEQWLAYWI+YSF+TL+E++
Sbjct: 653 KMSKLWIFITQLNSIAGPVLMLLYPLYASVVAIESTSKVDDEQWLAYWIIYSFLTLVEIV 474
Query: 438 LESLIYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
L SL+ WIPIWY KL +AWLVLP +GAAF+Y+KFVR +RK+
Sbjct: 473 LASLLEWIPIWYNAKLFLVAWLVLPQSKGAAFLYEKFVRPHVRKY 339
Score = 105 bits (224), Expect = 9e-022
Identities = 51/104 (49%), Positives = 62/104 (59%)
Frame = +2 / +1
Query: 308 FRSCSRTNLS*MKAAPLKLGSTSHAMNSSLSSYQMGIQYMRDSRSISMSVTKE*RIQ*AX 487
FR+C TN S KAAPL G TSHA +S + YQ+GI RD+R+IS V E* IQ*A
Sbjct: 343 FRTCGLTNFSYKKAAPLDCGKTSHATRNSFALYQIGIHSKRDARTISTRVRNE*MIQ*AS 522
Query: 488 XXXXXXXXXXXIARTDAYRGYSSITVGPAREWR*VRIVHSLPIL 619
IA T+AY+GYS+I GPA E V +H+L IL
Sbjct: 523 HCSSSTLDVLSIATTEAYKGYSNINTGPAMELSWVMKIHNLLIL 654
>gb|CA917721.1|CA917721 EST641868 GPOD Medicago truncatula cDNA clone GPOD-37E21, mRNA
sequence
Length = 701
Score = 138 bits (296), Expect = 1e-031
Identities = 51/95 (53%), Positives = 68/95 (71%)
Frame = -2 / +2
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESL 427
L +L + LAGP + L+YPLYASVRA+ES S +DD+QWL YW+LYS +TL E+ +
Sbjct: 107 LMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKI 286
Query: 426 IYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVR 322
+ WIPIW KL+ WLVLP F GAA++Y+ +VR
Sbjct: 287 LEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVR 391
>gb|CX521899.1|CX521899 s13dNF1FE12VI099_469602 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 614
Score = 138 bits (296), Expect = 1e-031
Identities = 51/95 (53%), Positives = 68/95 (71%)
Frame = -2 / +2
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESL 427
L +L + LAGP + L+YPLYASVRA+ES S +DD+QWL YW+LYS +TL E+ +
Sbjct: 140 LMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKI 319
Query: 426 IYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVR 322
+ WIPIW KL+ WLVLP F GAA++Y+ +VR
Sbjct: 320 LEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVR 424
>gb|CX523689.1|CX523689 s13dNF02G07AT054_322762 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 692
Score = 138 bits (296), Expect = 1e-031
Identities = 51/95 (53%), Positives = 68/95 (71%)
Frame = -2 / +2
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESL 427
L +L + LAGP + L+YPLYASVRA+ES S +DD+QWL YW+LYS +TL E+ +
Sbjct: 215 LMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKI 394
Query: 426 IYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVR 322
+ WIPIW KL+ WLVLP F GAA++Y+ +VR
Sbjct: 395 LEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVR 499
>gb|DW017475.1|DW017475 EST1226436 MTY Medicago truncatula cDNA clone MTYAU11, mRNA
sequence
Length = 795
Score = 138 bits (296), Expect = 1e-031
Identities = 51/95 (53%), Positives = 68/95 (71%)
Frame = -2 / +1
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESL 427
L +L + LAGP + L+YPLYASVRA+ES S +DD+QWL YW+LYS +TL E+ +
Sbjct: 151 LMVLLKNFDVLAGPVISLVYPLYASVRAVESKSPVDDQQWLTYWVLYSLITLFELTFAKI 330
Query: 426 IYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFVR 322
+ WIPIW KL+ WLVLP F GAA++Y+ +VR
Sbjct: 331 LEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVR 435
>gb|CA919102.1|CA919102 EST636820 MTUS Medicago truncatula cDNA clone MTUS-7G8, mRNA
sequence
Length = 636
Score = 137 bits (293), Expect = 3e-031
Identities = 49/73 (67%), Positives = 64/73 (87%)
Frame = -2 / -2
Query: 522 MESPSKLDDEQWLAYWILYSFVTLMEMLLESLIYWIPIWYELKLLFIAWLVLPNFRGAAF 343
+ESPSKLDDEQWLAYWI+YSF+TL EML++ + WIPIWY++KLL AWLVLP F GAA+
Sbjct: 635 IESPSKLDDEQWLAYWIIYSFLTLGEMLMQPALEWIPIWYDVKLLVAAWLVLPQFMGAAY 456
Query: 342 IYDKFVREQLRKH 304
+Y++FVR+ +RK+
Sbjct: 455 LYERFVRDHIRKY 417
>gb|CX539846.1|CX539846 s13dNF0HH01GS012_462964 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 392
Score = 136 bits (291), Expect = 5e-031
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = -2 / +3
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESL 427
L +L + LAGP + L+YPLYASVRA+ES S +DD+QWL YW+LYS +TL E+ +
Sbjct: 111 LMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKI 290
Query: 426 IYWIPIWYELKLLFIAWLVLPNFRGAAFIYDKFV 325
+ WIPIW KL+ WLVLP F GAA++Y+ +V
Sbjct: 291 LEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYV 392
>gb|AW687624.2|AW687624 NF011F05RT1F1046 Developing root Medicago truncatula cDNA clone
NF011F05RT 5', mRNA sequence
Length = 476
Score = 133 bits (285), Expect = 3e-030
Identities = 49/91 (53%), Positives = 65/91 (71%)
Frame = -2 / +2
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESL 427
L +L + LAGP + L+YPLYASVRA+ES S +DD+QWL YW+LYS +TL E+ +
Sbjct: 131 LMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKI 310
Query: 426 IYWIPIWYELKLLFIAWLVLPNFRGAAFIYD 334
+ WIPIW KL+ WLVLP F GAA++Y+
Sbjct: 311 LEWIPIWPYAKLILTCWLVLPYFTGAAYVYE 403
>emb|CR485759.1| mth2-154H16FM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 804
Score = 79.0 bits (166), Expect(2) = 5e-029
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -2 / -2
Query: 540 YASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESLIYW 418
YASV A+ESPSKLDDEQWLAYWI+YSF+TL EML++ + W
Sbjct: 695 YASVVAIESPSKLDDEQWLAYWIIYSFLTLGEMLMQPALEW 573
Score = 70.3 bits (147), Expect(2) = 5e-029
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -2 / -3
Query: 417 IPIWYELKLLFIAWLVLPNFRGAAFIYDKFVREQLRKH 304
IPIWY++KLL AWLVLP F GAA++Y++FVR+ +RK+
Sbjct: 466 IPIWYDVKLLVAAWLVLPQFMGAAYLYERFVRDHIRKY 353
>gb|AJ497137.1|AJ497137 AJ497137 MTFLOW Medicago truncatula cDNA clone mt--abc955105a12,
mRNA sequence
Length = 377
Score = 125 bits (267), Expect = 1e-027
Identities = 47/88 (53%), Positives = 61/88 (69%)
Frame = -2 / +2
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAMESPSKLDDEQWLAYWILYSFVTLMEMLLESL 427
L +L + LAGP + L+YPLYASVRA+ES S +DD+QWL YW+LYS +TL E+ +
Sbjct: 113 LMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKI 292
Query: 426 IYWIPIWYELKLLFIAWLVLPNFRGAAF 343
+ WIPIW KL+ WLVLP GAA+
Sbjct: 293 LEWIPIWPYAKLILTCWLVLPYLTGAAY 376
>gb|BI310113.1|BI310113 EST5311863 GESD Medicago truncatula cDNA clone pGESD7K13 5' end,
mRNA sequence
Length = 528
Score = 100 bits (212), Expect(2) = 6e-027
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = -2 / +1
Query: 522 MESPSKLDDEQWLAYWILYSFVTLMEMLLESLIYWIPIWYELKLLFIAWLVLPNFRGAAF 343
+ S S +DD+QWL YW+LYS +TL E+ ++ WIPIW KL+ WLVLP F GAA+
Sbjct: 94 LRSKSPVDDQQWLTYWVLYSLITLFELTFAKILEWIPIWPYAKLILTCWLVLPYFTGAAY 273
Query: 342 IYDKFVR 322
+Y+ +VR
Sbjct: 274 VYEHYVR 294
Score = 42.3 bits (86), Expect(2) = 6e-027
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 606 LWTILTHLHSLAGPTVMLLYPLYASVRAME 517
L +L + LAGP + L+YPLYASVRA+E
Sbjct: 9 LMVLLRNFDVLAGPVISLVYPLYASVRAIE 98
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 657,238,042
Number of Sequences: 392609
Number of extensions: 8581294
Number of successful extensions: 49684
Number of sequences better than 1.0e-020: 27
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 26469123450
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)