TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455878.2.1
(1327 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC140068.18| Medicago truncatula clone mth2-15l24, compl... 76 7e-033
gb|AC139852.10| Medicago truncatula clone mth2-8n13, WORKIN... 79 6e-032
gb|AC171618.7| Medicago truncatula clone mth2-144n17, WORKI... 73 8e-032
gb|DW018810.1|DW018810 EST1227771 MTY Medicago truncatula c... 72 1e-031
gb|AC123575.10| Medicago truncatula clone mth1-31p6, comple... 74 1e-029
gb|AC147536.11| Medicago truncatula clone mth2-9l3, complet... 68 3e-027
gb|AC146757.19| Medicago truncatula clone mth2-16n21, compl... 68 5e-027
gb|AC146549.7| Medicago truncatula clone mth2-7p18, complet... 72 1e-025
gb|BQ165539.1|BQ165539 EST611408 KVKC Medicago truncatula c... 66 2e-024
gb|CB894426.1|CB894426 EST647218 HOGA Medicago truncatula c... 68 2e-022
gb|AW560370.1|AW560370 EST315418 DSIR Medicago truncatula c... 66 1e-021
gb|AL388319.1|AL388319 MtBC47H04R1 MtBC Medicago truncatula... 66 1e-021
gb|AL388318.1|AL388318 MtBC47H04F1 MtBC Medicago truncatula... 66 1e-021
gb|AW329216.2|AW329216 N200428e rootphos(-) Medicago trunca... 61 3e-021
>gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete sequence
Length = 111620
Score = 75.8 bits (159), Expect(4) = 7e-033
Identities = 29/84 (34%), Positives = 52/84 (61%)
Frame = +2 / -3
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+ LL+AQ+ +W+H ++ SM+LKC V+L IP IHN G +L L+++L + K +
Sbjct: 46902 SNLLKAQSHIWKHIFNFINSMSLKCVVDLGIPDIIHNYGRPMSLSKLISSLPINPTKTCY 46723
Query: 248 LGRVMRLLVTSGVFASSDDVQYRL 319
R++R++ SG+F+ + + L
Sbjct: 46722 FHRLIRIMTYSGIFSQQNITENEL 46651
Score = 73.9 bits (155), Expect(3) = 3e-030
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +2 / -3
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+ LL+AQ+ +W H ++ SM+LKC V+L IP IHN G L L+++LS+ +K
Sbjct: 19929 SNLLKAQSHVWNHMFNFINSMSLKCVVDLGIPDIIHNYGKPIPLSKLISSLSIHPSKNHG 19750
Query: 248 LGRVMRLLVTSGVFASSD 301
+ R+MR++ SG F+ +
Sbjct: 19749 IHRLMRIMTHSGFFSQKN 19696
Score = 73.0 bits (153), Expect(3) = 2e-031
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +2 / -2
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+ LL+AQ+ +W H ++ SM+LKC V+L IP IHN G +L L++ L + +K F
Sbjct: 28363 SNLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDIIHNYGKPISLSKLISLLPIHPSKTCF 28184
Query: 248 LGRVMRLLVTSGVFA 292
+ R+MR++ S F+
Sbjct: 28183 IHRLMRIMTHSSFFS 28139
Score = 68.0 bits (142), Expect(3) = 2e-031
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +2 / -1
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
E QL DMLMMV G++R + +W + + AGFSDYK+ +G R +IE+YP*
Sbjct: 26477 ETQLFFDMLMMVVLAGKERNKKEWIKLISSAGFSDYKITPILGLRSLIEIYP* 26319
Score = 66.6 bits (139), Expect(3) = 3e-030
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +2 / -2
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
E QL DMLMM G++R E +W + + AGF+DYK+ +G R +IE+YP*
Sbjct: 18067 ETQLFFDMLMMALLTGKERNEKEWMKLISLAGFNDYKITPILGLRSMIEIYP* 17909
Score = 66.1 bits (138), Expect(4) = 7e-033
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +2 / -1
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
+ QL DMLMMV G++R + +W + + AGF+DYK+ +G R VIE+YP*
Sbjct: 15143 KTQLFFDMLMMVLATGKERTKKEWVKLISSAGFNDYKITPVLGLRSVIEIYP* 14985
Score = 54.7 bits (113), Expect(3) = 2e-031
Identities = 19/42 (45%), Positives = 33/42 (78%)
Frame = +2 / -1
Query: 794 VMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
+ L+ +LH W+D++CVKIL+ C+ AI + + GKVI+I+++L
Sbjct: 26636 IKLQWILHDWNDEECVKILKNCKDAISKKGKQGKVIVIDMVL 26511
Score = 53.8 bits (111), Expect(4) = 7e-033
Identities = 19/41 (46%), Positives = 32/41 (78%)
Frame = +2 / -1
Query: 797 MLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
M++ +LH W+D++CVKIL C+ AI + + GKVIII++++
Sbjct: 15296 MMQWILHDWNDEECVKILRNCKDAIAKKGKEGKVIIIDMVV 15174
Score = 51.5 bits (106), Expect(3) = 3e-030
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = +2 / -2
Query: 800 LKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
L+ +LH W+D+ C+KIL+ C+ AI + + GKV+II+++L
Sbjct: 18220 LQWILHDWNDEQCLKILKNCKDAISKKGKEGKVVIIDMVL 18101
Score = 30.9 bits (61), Expect(4) = 7e-033
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2 / -2
Query: 683 AAAIVKAFPDIKCTVLNLP 739
A A+ K+FP ++CTV +LP
Sbjct: 16369 AKALAKSFPQLECTVFDLP 16313
>gb|AC139852.10| Medicago truncatula clone mth2-8n13, WORKING DRAFT SEQUENCE, 10
ordered pieces
Length = 154519
Score = 79.0 bits (166), Expect(3) = 6e-032
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +2 / +3
Query: 71 ELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPFL 250
EL Q Q+ L+ H L M+LKCAV+L+IP I+N G TLPDLV+ L +P AK +
Sbjct: 3786 ELFQGQSLLYTHMYASLKPMSLKCAVQLNIPEIIYNHGKPITLPDLVSTLKVPLAKSSLV 3965
Query: 251 GRVMRLLVTSGVFA 292
R+MR L G+FA
Sbjct: 3966 KRLMRFLAHIGIFA 4007
Score = 72.5 bits (152), Expect(4) = 3e-028
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +2 / +3
Query: 71 ELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPFL 250
EL + Q+ L+ H +L SMALK A++L+IP I+N G TL DLV+ L +P +K +
Sbjct: 31920 ELFEGQSLLYMHMFGFLKSMALKWAIQLNIPDIIYNHGKPITLSDLVSTLQVPISKQSLV 32099
Query: 251 GRVMRLLVTSGVF 289
R+MR L +G+F
Sbjct: 32100 ERLMRFLAHNGIF 32138
Score = 60.6 bits (126), Expect(3) = 6e-032
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2 / +3
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
+ L+MD+ MM G++R E +W H+F +AGF DYK+ +IEVYP*
Sbjct: 22371 QQNLIMDINMMAFDGGKERTEKEWNHLFIEAGFKDYKIFPLFSYESLIEVYP* 22529
Score = 58.8 bits (122), Expect(3) = 6e-032
Identities = 20/42 (47%), Positives = 34/42 (80%)
Frame = +2 / +1
Query: 794 VMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
++L+ +LH WSD++C+KIL+ C+ ++ S+ GKVIII+IL+
Sbjct: 6682 IVLQSILHDWSDENCIKILKTCKDSVSSKGRKGKVIIIDILI 6807
Score = 57.4 bits (119), Expect(4) = 3e-028
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2 / +2
Query: 971 LMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
L+M+ G++R +W+H+F +AGF DYK+ G R +IE YP*
Sbjct: 33428 LIMMGINGKERTGKEWKHLFVEAGFKDYKIFPLFGFRSLIEAYP* 33562
Score = 53.8 bits (111), Expect(4) = 3e-028
Identities = 18/42 (42%), Positives = 33/42 (78%)
Frame = +2 / +2
Query: 794 VMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
V L+ +LH W+D+ C+KIL+ C++++ S + GKVII++I++
Sbjct: 33251 VFLQWILHDWTDEICIKILKTCKESVSSNGKKGKVIIMDIII 33376
Score = 28.1 bits (55), Expect(4) = 3e-028
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 680 SAAAIVKAFPDIKCTVLNLPR 742
+A I +AFP +KC V +LP+
Sbjct: 32514 TARIICEAFPKLKCVVYDLPQ 32576
>gb|AC171618.7| Medicago truncatula clone mth2-144n17, WORKING DRAFT SEQUENCE, 24
unordered pieces
Length = 79251
Score = 72.5 bits (152), Expect(4) = 8e-032
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +2 / +1
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
A+LLQAQ ++ H ++ SM+LKCA+EL IP IHN G L L++ L + +K
Sbjct: 51013 AKLLQAQTQVFNHIFSFINSMSLKCAIELCIPDVIHNYGQPIPLSKLISLLPIHPSKTGD 51192
Query: 248 LGRVMRLLVTSGVF 289
+ R+MR+L SG F
Sbjct: 51193 IHRLMRVLTHSGFF 51234
Score = 66.1 bits (138), Expect(4) = 8e-032
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2 / +3
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
EAQL D+ MMV G++R E +W ++F AGFS+YK+ +G + +IEV+P*
Sbjct: 52317 EAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 52475
Score = 55.6 bits (115), Expect(4) = 8e-032
Identities = 20/41 (48%), Positives = 34/41 (82%)
Frame = +2 / +3
Query: 800 LKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLG 922
+K VLH W+D++C+KIL+ C++AI ++ + GKVIII+ ++G
Sbjct: 52167 MKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVMG 52289
Score = 27.2 bits (53), Expect(4) = 8e-032
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2 / +1
Query: 692 IVKAFPDIKCTVLNLP 739
I K+FP+I+C V +LP
Sbjct: 51607 IAKSFPNIECIVFDLP 51654
>gb|DW018810.1|DW018810 EST1227771 MTY Medicago truncatula cDNA clone MTYBB22, mRNA
sequence
Length = 761
Score = 72.1 bits (151), Expect(3) = 1e-031
Identities = 31/74 (41%), Positives = 51/74 (68%)
Frame = +2 / +2
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+E+ +AQA L++H ++ SM+LK AVE++IP IHN G +L +LV+ L +P++K+
Sbjct: 65 SEIFKAQALLYKHIFAFIDSMSLKWAVEMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 244
Query: 248 LGRVMRLLVTSGVF 289
+ R+MR L +G F
Sbjct: 245 VRRLMRYLAHNGFF 286
Score = 58.8 bits (122), Expect(3) = 1e-031
Identities = 21/45 (46%), Positives = 35/45 (77%)
Frame = +2 / +1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
A AV+LK +LH W+D DC +IL+ C++A+ + + GKVIII++++
Sbjct: 430 ADAVLLKYILHNWTDKDCTRILKKCKEAVTNDGKKGKVIIIDMVI 564
Score = 51.5 bits (106), Expect(3) = 1e-031
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +2 / +1
Query: 977 MVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
M G++R E++W+ +F +AGF DYK+ G +IE+YP*
Sbjct: 622 MACLNGKERNEEEWKKLFIEAGFQDYKISPLTGFLSLIEIYP* 750
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence
Length = 83007
Score = 74.4 bits (156), Expect(3) = 1e-029
Identities = 29/78 (37%), Positives = 49/78 (62%)
Frame = +2 / +2
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+ LL+AQ+ +W H ++ SM+LKC V+L IP IHN G + L+++L + +K P
Sbjct: 9821 SNLLKAQSHVWNHIFNFINSMSLKCVVDLGIPDIIHNHGKPMPISKLISSLPIHPSKKPC 10000
Query: 248 LGRVMRLLVTSGVFASSD 301
+ R+MR++ SG F+ +
Sbjct: 10001 IHRLMRIMTHSGFFSQQN 10054
Score = 62.0 bits (129), Expect(3) = 1e-029
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2 / +3
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
E +L DMLMMV G++R + +W + + AGF DYK+ +G R VIE+Y
Sbjct: 11223 ETKLFFDMLMMVTLTGKERTKKEWVKLISSAGFCDYKITPILGLRAVIEIY 11375
Score = 52.4 bits (108), Expect(3) = 1e-029
Identities = 18/37 (48%), Positives = 30/37 (81%)
Frame = +2 / +3
Query: 809 VLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
+LH W+D++CVKIL+ C+ AI + + GKV+II+++L
Sbjct: 11079 ILHDWNDEECVKILKNCKDAISKKGKEGKVVIIDMVL 11189
>gb|AC147536.11| Medicago truncatula clone mth2-9l3, complete sequence
Length = 111486
Score = 68.4 bits (143), Expect(3) = 3e-027
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2 / -3
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+EL + QA L+ +L +++K AVEL IP I N G TLP+LV+AL +P AK
Sbjct: 67717 SELFEVQAHLYNQLFSFLRPVSIKWAVELGIPDIIQNHGKPITLPELVSALRIPEAKAGC 67538
Query: 248 LGRVMRLLVTSGVFA 292
+ VMRLL + +FA
Sbjct: 67537 VHSVMRLLAHNKIFA 67493
Score = 59.7 bits (124), Expect(3) = 3e-027
Identities = 21/37 (56%), Positives = 32/37 (86%)
Frame = +2 / -1
Query: 809 VLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
V+H W+DDDCVKIL+ C++A +++GGKVIII+I++
Sbjct: 56814 VIHNWNDDDCVKILKKCKEAASRQKKGGKVIIIDIVI 56704
Score = 53.3 bits (110), Expect(3) = 3e-027
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2 / -1
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEV 1096
E +L D+ MM N R+R E W+ I T+AGF YK+ G R +IE+
Sbjct: 56673 EVKLCFDITMMANHNSRERDEKTWKKIITEAGFMSYKIFPIFGFRSLIEL 56524
>gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete sequence
Length = 135915
Score = 68.4 bits (143), Expect(3) = 5e-027
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +2 / -3
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+EL + QA L+ +L +++K AVEL IP I N G TLP+LV+AL +P AK
Sbjct: 92149 SELFEVQAHLYNQLFSFLRPVSIKWAVELGIPDIIQNHGKPITLPELVSALRIPEAKAGC 91970
Query: 248 LGRVMRLLVTSGVFA 292
+ VMRLL + +FA
Sbjct: 91969 VHSVMRLLAHNKIFA 91925
Score = 59.7 bits (124), Expect(3) = 5e-027
Identities = 21/37 (56%), Positives = 32/37 (86%)
Frame = +2 / -2
Query: 809 VLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
V+H W+DDDCVKIL+ C++A +++GGKVIII+I++
Sbjct: 81245 VIHNWNDDDCVKILKKCKEAASRQKKGGKVIIIDIVI 81135
Score = 53.3 bits (110), Expect(3) = 5e-027
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2 / -2
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEV 1096
E +L D+ MM N R+R E W+ I T+AGF YK+ G R +IE+
Sbjct: 81104 EVKLCFDITMMANHNSRERDEKTWKKIITEAGFMSYKIFPIFGFRSLIEL 80955
>gb|AC146549.7| Medicago truncatula clone mth2-7p18, complete sequence
Length = 96613
Score = 72.1 bits (151), Expect(3) = 1e-025
Identities = 31/74 (41%), Positives = 51/74 (68%)
Frame = +2 / +1
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+E+ +AQA L++H ++ SM+LK AVE++IP IHN G +L +LV+ L +P++K+
Sbjct: 63433 SEIFKAQALLYKHIFAFIDSMSLKWAVEMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 63612
Query: 248 LGRVMRLLVTSGVF 289
+ R+MR L +G F
Sbjct: 63613 VRRLMRYLAHNGFF 63654
Score = 70.3 bits (147), Expect(3) = 6e-025
Identities = 31/74 (41%), Positives = 51/74 (68%)
Frame = +2 / +2
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+E+ +AQA L+++ ++ SM+LK +VE+ IPT I+N G TL +LV+ L +P+ K+
Sbjct: 69041 SEIFKAQALLYKNMYAFIDSMSLKWSVEMDIPTIIYNHGKPITLSNLVSILQIPSTKVDN 69220
Query: 248 LGRVMRLLVTSGVF 289
+ R+MRLL +G F
Sbjct: 69221 VQRLMRLLAHNGFF 69262
Score = 68.4 bits (143), Expect(3) = 3e-025
Identities = 29/74 (39%), Positives = 50/74 (67%)
Frame = +2 / -2
Query: 68 AELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPF 247
+E+ +AQA L+++ ++ SM+LK ++E++IP IHN G TL +LV+ L +P+ K+
Sbjct: 81945 SEIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDN 81766
Query: 248 LGRVMRLLVTSGVF 289
+ R+MR L +G F
Sbjct: 81765 VQRLMRYLAHNGFF 81724
Score = 54.7 bits (113), Expect(3) = 3e-025
Identities = 19/40 (47%), Positives = 32/40 (80%)
Frame = +2 / -2
Query: 800 LKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
L+ VLH W+D DC+KIL+ C++A+ S + GKVI+I++++
Sbjct: 80580 LQAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVI 80461
Score = 54.2 bits (112), Expect(3) = 6e-025
Identities = 18/42 (42%), Positives = 33/42 (78%)
Frame = +2 / +2
Query: 794 VMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
V L+ +LH W+D DC+KIL+ C++A+ + + GKVI+I++++
Sbjct: 70574 VTLQWILHDWTDRDCIKILKKCKEAVTTEGKRGKVIVIDMVI 70699
Score = 52.4 bits (108), Expect(3) = 1e-025
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = +2 / +2
Query: 800 LKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
LK +LH W+D DC +IL+ C++A+ + + GKVIII++++
Sbjct: 64745 LKYILHNWTDKDCTRILKKCKEAVTNDGKKGKVIIIDMVI 64864
Score = 51.5 bits (106), Expect(3) = 1e-025
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +2 / +2
Query: 977 MVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
M G++R E++W+ +F +AGF DYK+ G +IE+YP*
Sbjct: 64922 MACLNGKERNEEEWKKLFIEAGFQDYKISPLTGFLSLIEIYP* 65050
Score = 51.5 bits (106), Expect(3) = 3e-025
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2 / -2
Query: 992 GRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
G++R E++W+ +F +AGF DYK+ G +IE+YP*
Sbjct: 80388 GKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP* 80275
Score = 48.7 bits (100), Expect(3) = 6e-025
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2 / +2
Query: 992 GRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
G++R E++W+ +F +AGF +YK+ G +IE+YP*
Sbjct: 70772 GKERNEEEWKKLFMEAGFENYKISPCTGLLSLIEIYP* 70885
>gb|BQ165539.1|BQ165539 EST611408 KVKC Medicago truncatula cDNA clone pKVKC-10A2, mRNA
sequence
Length = 762
Score = 66.1 bits (138), Expect(3) = 2e-024
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2 / -1
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
EAQL D+ MMV G++R E +W ++F AGFS+YK+ +G + +IEV+P*
Sbjct: 366 EAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 208
Score = 59.3 bits (123), Expect(3) = 2e-024
Identities = 21/44 (47%), Positives = 37/44 (84%)
Frame = +2 / -1
Query: 791 AVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLG 922
+++LK VLH W+D++C+KIL+ C++AI ++ + GKVIII+ ++G
Sbjct: 525 SILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVMG 394
Score = 27.2 bits (53), Expect(3) = 2e-024
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 692 IVKAFPDIKCTVLNLP 739
I K+FP+I+C V +LP
Sbjct: 654 IAKSFPNIECIVFDLP 607
>gb|CB894426.1|CB894426 EST647218 HOGA Medicago truncatula cDNA clone HOGA-31K19, mRNA
sequence
Length = 817
Score = 68.0 bits (142), Expect(2) = 2e-022
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
E QL DMLMMV G++R + +W + + AGFSDYK+ +G R +IE+YP*
Sbjct: 468 ETQLFFDMLMMVVLAGKERNKKEWIKLISSAGFSDYKITPILGLRSLIEIYP* 626
Score = 59.7 bits (124), Expect(2) = 2e-022
Identities = 21/43 (48%), Positives = 35/43 (81%)
Frame = +2 / +3
Query: 791 AVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
A++LK +LH W+D++CVKIL+ C+ AI + + GKVI+I+++L
Sbjct: 306 AILLKWILHDWNDEECVKILKNCKDAISKKGKQGKVIVIDMVL 434
>gb|AW560370.1|AW560370 EST315418 DSIR Medicago truncatula cDNA clone pDSIR-26L24, mRNA
sequence
Length = 619
Score = 66.1 bits (138), Expect(2) = 1e-021
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2 / -3
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
EAQL D+ MMV G++R E +W ++F AGFS+YK+ +G + +IEV+P*
Sbjct: 374 EAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 216
Score = 59.3 bits (123), Expect(2) = 1e-021
Identities = 21/44 (47%), Positives = 37/44 (84%)
Frame = +2 / -3
Query: 791 AVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLG 922
+++LK VLH W+D++C+KIL+ C++AI ++ + GKVIII+ ++G
Sbjct: 533 SILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVMG 402
>gb|AL388319.1|AL388319 MtBC47H04R1 MtBC Medicago truncatula cDNA clone MtBC47H04 T7, mRNA
sequence
Length = 550
Score = 66.1 bits (138), Expect(2) = 1e-021
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2 / +1
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
EAQL D+ MMV G++R E +W ++F AGFS+YK+ +G + +IEV+P*
Sbjct: 160 EAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 318
Score = 59.3 bits (123), Expect(2) = 1e-021
Identities = 21/44 (47%), Positives = 37/44 (84%)
Frame = +2 / +1
Query: 791 AVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLG 922
+++LK VLH W+D++C+KIL+ C++AI ++ + GKVIII+ ++G
Sbjct: 1 SILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVMG 132
>gb|AL388318.1|AL388318 MtBC47H04F1 MtBC Medicago truncatula cDNA clone MtBC47H04 T3, mRNA
sequence
Length = 477
Score = 66.1 bits (138), Expect(2) = 1e-021
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2 / +3
Query: 947 EAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
EAQL D+ MMV G++R E +W ++F AGFS+YK+ +G + +IEV+P*
Sbjct: 246 EAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 404
Score = 59.3 bits (123), Expect(2) = 1e-021
Identities = 21/44 (47%), Positives = 37/44 (84%)
Frame = +2 / +3
Query: 791 AVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLG 922
+++LK VLH W+D++C+KIL+ C++AI ++ + GKVIII+ ++G
Sbjct: 87 SILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVMG 218
>gb|AW329216.2|AW329216 N200428e rootphos(-) Medicago truncatula cDNA clone MHRP-17E8, mRNA
sequence
Length = 614
Score = 61.1 bits (127), Expect(3) = 3e-021
Identities = 21/45 (46%), Positives = 36/45 (80%)
Frame = +2 / -1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILL 919
A A+MLK +LH W+D+ C+KIL+ C++++ S + GKVII++I++
Sbjct: 455 ADAIMLKWILHDWTDEICIKILKTCKESVSSNGKKGKVIIMDIII 321
Score = 53.8 bits (111), Expect(3) = 3e-021
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2 / -1
Query: 971 LMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
L+M+ G++R +W+H+F +AGF DYK+ R +IE YP*
Sbjct: 269 LIMMGINGKERTGKEWKHLFVEAGFKDYKIFPLFENRSLIEAYP* 135
Score = 26.7 bits (52), Expect(3) = 3e-021
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2 / -1
Query: 692 IVKAFPDIKCTVLNLPR 742
I +AFP +KC V +LP+
Sbjct: 581 ICEAFPKLKCVVYDLPQ 531
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 936,559,699
Number of Sequences: 392609
Number of extensions: 10782098
Number of successful extensions: 46015
Number of sequences better than 1.0e-020: 16
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 48224417395
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)