TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448387.2.1
(919 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI309413.1|BI309413 EST530823 GPOD Medicago truncatula c... 129 2e-043
gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Med... 119 1e-040
gb|CA918666.1|CA918666 EST636384 MTUS Medicago truncatula c... 90 2e-040
gb|CA922957.1|CA922957 EST640675 MTUS Medicago truncatula c... 90 2e-040
gb|AW776415.1|AW776415 EST335480 DSIL Medicago truncatula c... 90 1e-036
gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cD... 102 1e-035
gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula c... 90 2e-035
gb|BG588349.1|BG588349 EST490158 MHRP- Medicago truncatula ... 129 2e-035
gb|AL389862.1|AL389862 MtBC57H09F1 MtBC Medicago truncatula... 119 5e-035
gb|AW776080.1|AW776080 EST335145 DSIL Medicago truncatula c... 121 5e-033
gb|CA921826.1|CA921826 EST639544 MTUS Medicago truncatula c... 114 2e-031
gb|BF005122.1|BF005122 EST433620 DSLC Medicago truncatula c... 88 3e-031
gb|BI311229.1|BI311229 EST5312979 GESD Medicago truncatula ... 130 4e-031
gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula c... 82 6e-029
gb|CA919190.1|CA919190 EST636908 MTUS Medicago truncatula c... 127 3e-028
gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula c... 79 4e-028
gb|AW329094.2|AW329094 N200300e rootphos(-) Medicago trunca... 100 4e-028
gb|CX523046.1|CX523046 s13dNF88A11VI085_471896 Virus-Infect... 126 7e-028
gb|DW017971.1|DW017971 EST1226932 MTY Medicago truncatula c... 85 8e-028
gb|AL372362.1|AL372362 MtBA50D05R1 MtBA Medicago truncatula... 90 2e-026
gb|BF634495.1|BF634495 NF062B09DT1F1076 Drought Medicago tr... 68 3e-025
gb|BI269977.1|BI269977 NF003D02FL1F1026 Developing flower M... 89 3e-025
gb|CA917753.1|CA917753 EST641900 GPOD Medicago truncatula c... 69 1e-024
gb|AW329421.2|AW329421 N200656e rootphos(-) Medicago trunca... 65 1e-022
gb|AC144503.17| Medicago truncatula clone mth2-13f22, compl... 65 4e-022
gb|AW329105.2|AW329105 N200312e rootphos(-) Medicago trunca... 68 4e-022
>gb|BI309413.1|BI309413 EST530823 GPOD Medicago truncatula cDNA clone pGPOD-11L1 5' end,
mRNA sequence
Length = 644
Score = 129 bits (276), Expect(2) = 2e-043
Identities = 53/96 (55%), Positives = 73/96 (76%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QVAPAELEA+L++HP++ DAAV L DE AGEVP + VVR G+ SE ++
Sbjct: 237 KELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSKISEDEI 416
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
Y++ +V YK++ + F + IPK+ SGKILR++L
Sbjct: 417 KQYISQQVVFYKRINRVYFTETIPKAASGKILRKEL 524
Score = 68.9 bits (144), Expect(2) = 2e-043
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N GEIC+R VM+GY E T+RTID GWLHT
Sbjct: 51 ETGASLPRNKAGEICIRGTKVMKGYLNDPEATKRTIDKEGWLHT 182
>gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Medicago truncatula cDNA clone
NF041C08ST 5', mRNA sequence
Length = 656
Score = 119 bits (255), Expect(2) = 1e-040
Identities = 49/90 (54%), Positives = 67/90 (74%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QVAPAELEA+L++HP++ DAAV L DE AGEVP + VVR G+ SE ++
Sbjct: 387 KELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSKISEDEI 566
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGK 463
Y++ +V YK++ + F + IPK+ SGK
Sbjct: 567 KQYISQQVVFYKRINRVYFTETIPKAASGK 656
Score = 68.9 bits (144), Expect(2) = 1e-040
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N GEIC+R VM+GY E T+RTID GWLHT
Sbjct: 201 ETGASLPRNKAGEICIRGTKVMKGYLNDPEATKRTIDKEGWLHT 332
>gb|CA918666.1|CA918666 EST636384 MTUS Medicago truncatula cDNA clone MTUS-1E11, mRNA
sequence
Length = 834
Score = 89.5 bits (189), Expect(3) = 2e-040
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2 / -2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEAD 556
KELIKYKGFQVAPAELEAI+LSHP + D AV + DE AGEVP + VVR G+ ++ D
Sbjct: 500 KELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTED 324
Score = 65.2 bits (136), Expect(3) = 2e-040
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -2 / -2
Query: 906 SLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
SLP+N PGEIC+R +M+GY E T TID GWLHT
Sbjct: 674 SLPRNQPGEICIRGDQIMKGYLNNPEATRETIDKEGWLHT 555
Score = 51.5 bits (106), Expect(3) = 2e-040
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -2 / -2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+E D+ +V+ +V YK++ + F+DAIPKS SGKILR+ LR
Sbjct: 332 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLR 207
>gb|CA922957.1|CA922957 EST640675 MTUS Medicago truncatula cDNA clone MTUS-60G10, mRNA
sequence
Length = 782
Score = 89.5 bits (189), Expect(3) = 2e-040
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2 / -3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEAD 556
KELIKYKGFQVAPAELEAI+LSHP + D AV + DE AGEVP + VVR G+ ++ D
Sbjct: 438 KELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTED 262
Score = 65.2 bits (136), Expect(3) = 2e-040
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -2 / -3
Query: 906 SLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
SLP+N PGEIC+R +M+GY E T TID GWLHT
Sbjct: 612 SLPRNQPGEICIRGDQIMKGYLNNPEATRETIDKEGWLHT 493
Score = 51.5 bits (106), Expect(3) = 2e-040
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -2 / -3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+E D+ +V+ +V YK++ + F+DAIPKS SGKILR+ LR
Sbjct: 270 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLR 145
>gb|AW776415.1|AW776415 EST335480 DSIL Medicago truncatula cDNA clone pDSIL-7H14, mRNA
sequence
Length = 618
Score = 89.5 bits (189), Expect(3) = 1e-036
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEAD 556
KELIKYKGFQVAPAELEAI+LSHP + D AV + DE AGEVP + VVR G+ ++ D
Sbjct: 161 KELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTED 337
Score = 51.9 bits (107), Expect(3) = 1e-036
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -2 / +2
Query: 885 GEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
GEIC+R +M+GY E T TID GWLHT
Sbjct: 8 GEICIRGDQIMKGYLNNPEATRETIDKEGWLHT 106
Score = 51.5 bits (106), Expect(3) = 1e-036
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -2 / +2
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+E D+ +V+ +V YK++ + F+DAIPKS SGKILR+ LR
Sbjct: 329 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLR 454
>gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cDNA clone pGVN-57J18 5' end,
mRNA sequence
Length = 567
Score = 102 bits (218), Expect(2) = 1e-035
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QVAPAELEA+L++HP++ DAAV L DE AGEVP + VVR G+ SE ++
Sbjct: 332 KELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSKISEDEI 511
Query: 552 MAYVAGRVASYKKL 511
Y++ +V YK++
Sbjct: 512 KQYISQQVVFYKRI 553
Score = 68.9 bits (144), Expect(2) = 1e-035
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N GEIC+R VM+GY E T+RTID GWLHT
Sbjct: 146 ETGASLPRNKAGEICIRGTKVMKGYLNDPEATKRTIDKEGWLHT 277
>gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula cDNA clone MTYBF07, mRNA
sequence
Length = 765
Score = 89.5 bits (189), Expect(3) = 2e-035
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEAD 556
KELIKYKGFQVAPAELEAI+LSHP + D AV + DE AGEVP + VVR G+ ++ D
Sbjct: 502 KELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTED 678
Score = 65.2 bits (136), Expect(3) = 2e-035
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -2 / +1
Query: 906 SLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
SLP+N PGEIC+R +M+GY E T TID GWLHT
Sbjct: 328 SLPRNQPGEICIRGDQIMKGYLNNPEATRETIDKEGWLHT 447
Score = 34.5 bits (69), Expect(3) = 2e-035
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -2 / +1
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKS 475
+E D+ +V+ +V YK++ + F+DAIPKS
Sbjct: 670 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKS 762
>gb|BG588349.1|BG588349 EST490158 MHRP- Medicago truncatula cDNA clone pMHRP-47N9, mRNA
sequence
Length = 609
Score = 129 bits (277), Expect(2) = 2e-035
Identities = 55/96 (57%), Positives = 75/96 (78%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QV PAELEA+LL+HP++ DAAV PD+EAG+VP + VVR G+ S + +
Sbjct: 208 KELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQVPMAYVVRNVGSNLSGSQV 387
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M +VA +VA YK++R + F+ +IPK+ SGKILR+ L
Sbjct: 388 MDFVAEQVAPYKRIRKVAFISSIPKNPSGKILRKDL 495
Score = 40.9 bits (83), Expect(2) = 2e-035
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2 / +1
Query: 906 SLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
++ +N GE+ +R M+GY+ +E T TI GWL T
Sbjct: 34 AVARNRTGELWLRGPGTMKGYFSNEEATRSTITPEGWLKT 153
>gb|AL389862.1|AL389862 MtBC57H09F1 MtBC Medicago truncatula cDNA clone MtBC57H09 T3, mRNA
sequence
Length = 535
Score = 119 bits (255), Expect(2) = 5e-035
Identities = 52/96 (54%), Positives = 68/96 (70%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIK G+QVAPAELE +L+SHP + DA V PD +AGEVP + VVR + +E D+
Sbjct: 238 KELIKCNGYQVAPAELEDLLISHPEISDAGVIPSPDAKAGEVPVAFVVRSLNSLITEEDI 417
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+VA VA YK+LR + F++ IPKS +GKILR+ L
Sbjct: 418 KKFVAKEVAPYKRLRRVTFIEKIPKSPTGKILRKDL 525
Score = 50.1 bits (103), Expect(2) = 5e-035
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -2 / +1
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
T +SLP N GEI +R +MQGY+ E T++TI+ GW T
Sbjct: 55 TSKSLPPNQLGEIWLRGPVMMQGYFNNPEATKQTINDQGWTLT 183
>gb|AW776080.1|AW776080 EST335145 DSIL Medicago truncatula cDNA clone pDSIL-6E3, mRNA
sequence
Length = 625
Score = 121 bits (258), Expect(2) = 5e-033
Identities = 52/98 (53%), Positives = 73/98 (74%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK +QV PAELE IL ++P + DAAV PDE+AG++P + VVR+ G+ + A +
Sbjct: 302 KELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQV 481
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRD 439
M YVA +V YKK+R + F+++IPKS +GKIL ++L D
Sbjct: 482 MDYVAKQVTPYKKIRRVSFINSIPKSPAGKILIKELVD 595
Score = 41.8 bits (85), Expect(2) = 5e-033
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2 / +2
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
TG +L GE+ +R +M+GY + T T+D+ GWL T
Sbjct: 119 TGEALSPGQKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKT 247
>gb|CA921826.1|CA921826 EST639544 MTUS Medicago truncatula cDNA clone MTUS-44H2, mRNA
sequence
Length = 632
Score = 114 bits (243), Expect(2) = 2e-031
Identities = 49/96 (51%), Positives = 67/96 (69%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIK G+QVAPAELE +L+SHP + DA V PD + GEVP + VVR + ++ D+
Sbjct: 458 KELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDAKVGEVPVAFVVRLPNSSITKEDI 279
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
+VA +VA YK+LR + F++ IPK +GKILR+ L
Sbjct: 278 QKFVAKQVAPYKRLRRVTFLEKIPKLATGKILRKDL 171
Score = 43.7 bits (89), Expect(2) = 2e-031
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2 / -1
Query: 903 LPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
LP N GEI +R +MQGY+ E T+ I+ GW+ T
Sbjct: 629 LPPNQLGEIWLRGPTIMQGYFNNPEATKLAINDQGWMIT 513
>gb|BF005122.1|BF005122 EST433620 DSLC Medicago truncatula cDNA clone pDSLC-31I2, mRNA
sequence
Length = 453
Score = 88.1 bits (186), Expect(2) = 3e-031
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGA 574
KELIKYKG+QVAPAELEA+L++HP++ DAAV L DE AGEVP + VVR G+
Sbjct: 285 KELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGS 443
Score = 68.9 bits (144), Expect(2) = 3e-031
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N GEIC+R VM+GY E T+RTID GWLHT
Sbjct: 99 ETGASLPRNKAGEICIRGTKVMKGYLNDPEATKRTIDKEGWLHT 230
>gb|BI311229.1|BI311229 EST5312979 GESD Medicago truncatula cDNA clone pGESD10E8 5' end,
mRNA sequence
Length = 693
Score = 130 bits (278), Expect(2) = 4e-031
Identities = 53/101 (52%), Positives = 79/101 (78%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QVAPAELE +L SHP ++DAAV PDE+AG++P + V+R+ + EA++
Sbjct: 372 KELIKYKGYQVAPAELEQLLQSHPEIKDAAVIPYPDEDAGQIPLAFVIRQPHSSMGEAEI 551
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFV 430
+ +VA +VA YKK+R + FV++IPK+ +GKILR+ L ++ +
Sbjct: 552 INFVAKQVAPYKKVRRVVFVNSIPKNATGKILRKDLLNKIL 674
Score = 26.3 bits (51), Expect(2) = 4e-031
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGY 844
+TG ++ GE+ VR +M+GY
Sbjct: 189 NTGEAMSPGEQGELWVRGPPIMKGY 263
>gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula cDNA clone pKVKC-9C6, mRNA
sequence
Length = 699
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIK+KGFQV PAELE +L+SHPS+ DAAV D AGEVP + VVR G +E
Sbjct: 489 KELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEIC 668
Query: 552 MAYVAGRV 529
++A +V
Sbjct: 669 KEFIAKQV 692
Score = 67.5 bits (141), Expect(2) = 6e-029
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TGRSL N PGEIC+R Q +M+GY + T+ TID GWLHT
Sbjct: 303 ETGRSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHT 434
>gb|CA919190.1|CA919190 EST636908 MTUS Medicago truncatula cDNA clone MTUS-10B7, mRNA
sequence
Length = 648
Score = 127 bits (272), Expect = 3e-028
Identities = 52/96 (54%), Positives = 72/96 (75%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QVAP ELEA+L++HP++ DAAV L DE AGEVP + VVR G+ SE ++
Sbjct: 603 KELIKYKGYQVAPVELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSKISEDEI 424
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
Y++ +V YK++ + F + IPK+ SGKILR++L
Sbjct: 423 KQYISQQVVFYKRINRVYFTETIPKAASGKILRKEL 316
>gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula cDNA clone pDSIR-30H13, mRNA
sequence
Length = 655
Score = 79.0 bits (166), Expect(2) = 4e-028
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRG 577
KELIK+KGFQV PAELE +L+SHPS+ DAAV D AGEVP + VVR G
Sbjct: 493 KELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNG 648
Score = 67.5 bits (141), Expect(2) = 4e-028
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TGRSL N PGEIC+R Q +M+GY + T+ TID GWLHT
Sbjct: 307 ETGRSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHT 438
>gb|AW329094.2|AW329094 N200300e rootphos(-) Medicago truncatula cDNA clone MHRP-16B12,
mRNA sequence
Length = 595
Score = 99.6 bits (211), Expect(2) = 4e-028
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QV PAELEA+LL+HP++ DAAV PD+EAG+VP + VVR G+ S + +
Sbjct: 380 KELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQVPMAYVVRNVGSNLSGSQV 559
Query: 552 MAYVAGRVASYK 517
M +VA +VA YK
Sbjct: 560 MDFVAEQVAPYK 595
Score = 46.9 bits (96), Expect(2) = 4e-028
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+T + LP N GE+ +R M+GY+ +E T TI GWL T
Sbjct: 194 ETAQPLPVNRTGELWLRGPTTMKGYFSNEEATRSTITPEGWLKT 325
>gb|CX523046.1|CX523046 s13dNF88A11VI085_471896 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 126 bits (269), Expect = 7e-028
Identities = 54/98 (55%), Positives = 74/98 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYK +QV PAELE IL ++P + DAAV PDE+AG++P + VVR+ G+ + A +
Sbjct: 44 KELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQV 223
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRD 439
M YVA +V YKK+R + F+++IPKS +GKILRR+L D
Sbjct: 224 MDYVAKQVTPYKKIRRVSFINSIPKSPAGKILRRELVD 337
>gb|DW017971.1|DW017971 EST1226932 MTY Medicago truncatula cDNA clone MTYB060, mRNA
sequence
Length = 801
Score = 84.9 bits (179), Expect(2) = 8e-028
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVR 586
KELIKYKG+QVAPAELE +L+SHP ++DA V PD+EAGEVP + VVR
Sbjct: 646 KELIKYKGYQVAPAELEDLLVSHPEIQDAVVVPFPDDEAGEVPIAYVVR 792
Score = 60.6 bits (126), Expect(2) = 8e-028
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DT + LP GE+CVR +M+GYY +E T++T+D GW+HT
Sbjct: 460 DTQKPLPPKQLGELCVRGPNMMEGYYNNREATKQTLDNEGWVHT 591
>gb|AL372362.1|AL372362 MtBA50D05R1 MtBA Medicago truncatula cDNA clone MtBA50D05 T7, mRNA
sequence
Length = 462
Score = 89.5 bits (189), Expect(2) = 2e-026
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEAD 556
KELIKYKGFQVAPAELEAI+LSHP + D AV + DE AGEVP + VVR G+ ++ D
Sbjct: 21 KELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTED 197
Score = 51.5 bits (106), Expect(2) = 2e-026
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -2 / +3
Query: 567 SEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+E D+ +V+ +V YK++ + F+DAIPKS SGKILR+ LR
Sbjct: 189 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLR 314
>gb|BF634495.1|BF634495 NF062B09DT1F1076 Drought Medicago truncatula cDNA clone NF062B09DT
5', mRNA sequence
Length = 623
Score = 68.4 bits (143), Expect(2) = 3e-025
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAG 613
KELIKYKG+ VAPAELEA+L++HP++ DA+V L DE AG
Sbjct: 504 KELIKYKGYXVAPAELEALLIAHPNISDASVVPLKDEAAG 623
Score = 68.4 bits (143), Expect(2) = 3e-025
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TG SLP+N GEIC+R VM+GY E T RTID GWLHT
Sbjct: 318 ETGASLPRNKAGEICIRGTKVMKGYLNDPEATNRTIDKEGWLHT 449
>gb|BI269977.1|BI269977 NF003D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF003D02FL 5', mRNA sequence
Length = 520
Score = 88.6 bits (187), Expect(2) = 3e-025
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
K++IKYKGFQ+APA+LEA+L+SHP + DAAV + AGE+P + VV++ G+ S +
Sbjct: 304 KDIIKYKGFQIAPADLEALLISHPEIVDAAVTAGKVDVAGEIPVAFVVKKVGSVLSSQHV 483
Query: 552 MAYVAGRVASYK 517
+ YVA +VA YK
Sbjct: 484 IDYVAXQVAPYK 519
Score = 48.3 bits (99), Expect(2) = 3e-025
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -2 / +1
Query: 915 TGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+G LP GE+ +R ++M+GY +E T TID GW+HT
Sbjct: 121 SGTFLPPGLSGELWLRGPSIMKGYLNNEEATMSTIDKDGWIHT 249
>gb|CA917753.1|CA917753 EST641900 GPOD Medicago truncatula cDNA clone GPOD-37M9, mRNA
sequence
Length = 628
Score = 69.3 bits (145), Expect(2) = 1e-024
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEA 616
KELIKYKGFQVAPAELEAI+LSHP + D AV + DE A
Sbjct: 512 KELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAA 628
Score = 65.2 bits (136), Expect(2) = 1e-024
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -2 / +2
Query: 906 SLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
SLP+N PGEIC+R +M+GY E T TID GWLHT
Sbjct: 338 SLPRNQPGEICIRGDQIMKGYLNNPEATRETIDKEGWLHT 457
>gb|AW329421.2|AW329421 N200656e rootphos(-) Medicago truncatula cDNA clone MHRP-19H8, mRNA
sequence
Length = 590
Score = 65.2 bits (136), Expect(2) = 1e-022
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = -2 / +3
Query: 906 SLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
SLP+N PGEIC+R +M+GY E T TID GWLHT
Sbjct: 327 SLPRNQPGEICIRGDQIMKGYLNNPEATRETIDKEGWLHT 446
Score = 62.9 bits (131), Expect(2) = 1e-022
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAA 643
KELIKYKGFQVAPAELEAI+LSHP + D A
Sbjct: 501 KELIKYKGFQVAPAELEAIILSHPQISDVA 590
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence
Length = 116810
Score = 64.8 bits (135), Expect(5) = 4e-022
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAV 640
KELIKYKGFQVAPAELEAI+LSHP + D AV
Sbjct: 31322 KELIKYKGFQVAPAELEAIILSHPQISDVAV 31414
Score = 44.6 bits (91), Expect(5) = 4e-022
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / +2
Query: 534 RVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+V YK++ + F+DAIPKS SGKILR+ LR
Sbjct: 32147 QVVFYKRINRVFFIDAIPKSPSGKILRKDLR 32239
Score = 37.3 bits (75), Expect(5) = 4e-022
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 906 SLPKNPPGEICVRSQAVMQG 847
SLP+N PGEIC+R +M+G
Sbjct: 30317 SLPRNQPGEICIRGDQIMKG 30376
Score = 33.6 bits (67), Expect(5) = 4e-022
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2 / +2
Query: 849 GYYRRKEETERTIDAAGWLHT 787
GY E T TID GWLHT
Sbjct: 31205 GYLNNPEATRETIDKEGWLHT 31267
Score = 30.9 bits (61), Expect(5) = 4e-022
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2 / +2
Query: 642 VFGLPDEEAGEVPASCVVRRRGAPESEAD 556
++ + DE AGEVP + VVR G+ ++ D
Sbjct: 31511 IYRMLDEAAGEVPVAFVVRSNGSIDTTED 31597
>gb|AW329105.2|AW329105 N200312e rootphos(-) Medicago truncatula cDNA clone MHRP-16C12,
mRNA sequence
Length = 457
Score = 67.5 bits (141), Expect(2) = 4e-022
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+TGRSL N PGEIC+R Q +M+GY + T+ TID GWLHT
Sbjct: 182 ETGRSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHT 313
Score = 58.8 bits (122), Expect(2) = 4e-022
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAA 643
KELIK+KGFQV PAELE +L+SHPS+ DAA
Sbjct: 368 KELIKFKGFQVPPAELEGLLVSHPSIADAA 457
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 662,943,233
Number of Sequences: 392609
Number of extensions: 7760961
Number of successful extensions: 31064
Number of sequences better than 1.0e-020: 28
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 31412709000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)