TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2440450.2.1
         (1291 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CF069643.1|CF069643  EST670364 MTUS Medicago truncatula c...   162   1e-042
gb|BG582275.1|BG582275  EST484015 GVN Medicago truncatula cD...   162   9e-039
gb|DW015279.1|DW015279  EST1224240 MTY Medicago truncatula c...   116   6e-031
gb|BQ139915.1|BQ139915  NF026E11PH1F1086 Phoma-infected Medi...   116   2e-029

>gb|CF069643.1|CF069643 EST670364 MTUS Medicago truncatula cDNA clone MTUS-22F12, mRNA
            sequence
          Length = 818

 Score =  162 bits (349), Expect(2) = 1e-042
 Identities = 67/132 (50%), Positives = 92/132 (69%)
 Frame = -2 / +3

                                                                        
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTL 880
            +K R +Q L+P+TVKQ  +A+ +  ++SNF+INGV+++ + LVG +  K ER TDV F L
Sbjct: 81   TKSRDSQGLIPVTVKQISEASHSGDEKSNFSINGVDLTNVTLVGMVYEKTERNTDVNFVL 260

                                                                        
Query: 879  DDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEI 700
            DDGTG+I   RW N+  D+KEM +  N  YV V G LK FQG R +VA++VR VTNF+EI
Sbjct: 261  DDGTGRIKCRRWVNDTFDSKEMEEVLNGMYVRVYGSLKSFQGVRQLVAFSVRPVTNFDEI 440

                        
Query: 699  TCHFLHCIQVHM 664
              HF+ CI  H+
Sbjct: 441  PFHFIDCIHNHL 476




 Score = 36.3 bits (73), Expect(2) = 1e-042
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -2 / +3

                                                  
Query: 516 EHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDD 400
           E G+H+ ++   LKLP D +   ++  ++ G IY+TIDD
Sbjct: 672 ETGVHVDELSRELKLPLDKIMLLLKTLLEGGVIYSTIDD 788



>gb|BG582275.1|BG582275 EST484015 GVN Medicago truncatula cDNA clone pGVN-69O9 5' end, mRNA
            sequence
          Length = 772

 Score =  162 bits (349), Expect = 9e-039
 Identities = 67/132 (50%), Positives = 92/132 (69%)
 Frame = -2 / +1

                                                                        
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTL 880
            +K R +Q L+P+TVKQ  +A+ +  ++SNF+INGV+++ + LVG +  K ER TDV F L
Sbjct: 100  TKSRDSQGLIPVTVKQISEASHSGDEKSNFSINGVDLTNVTLVGMVYEKTERNTDVNFVL 279

                                                                        
Query: 879  DDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVAYAVRRVTNFNEI 700
            DDGTG+I   RW N+  D+KEM +  N  YV V G LK FQG R +VA++VR VTNF+EI
Sbjct: 280  DDGTGRIKCRRWVNDTFDSKEMEEVLNGMYVRVYGSLKSFQGVRQLVAFSVRPVTNFDEI 459

                        
Query: 699  TCHFLHCIQVHM 664
              HF+ CI  H+
Sbjct: 460  PFHFIDCIHNHL 495



>gb|DW015279.1|DW015279 EST1224240 MTY Medicago truncatula cDNA clone MTYA315, mRNA sequence
          Length = 917

 Score =  116 bits (249), Expect(2) = 6e-031
 Identities = 51/103 (49%), Positives = 68/103 (66%)
 Frame = -2 / +2

                                                                        
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTL 880
            SK R +QTLLPLT+KQ   A Q+S DR+   I+GV V+T+ LVGR+  K  ++T+  F L
Sbjct: 248  SKNRESQTLLPLTIKQINHAPQSSDDRTGLTIDGVGVNTVTLVGRVCNKSGQITEFKFVL 427

                                                       
Query: 879  DDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGK 751
            DDGTG I+  +W +E +DA  +    N  YV + G LKGFQGK
Sbjct: 428  DDGTGTIECTKWLHEPADAMAVESILNGMYVRLYGQLKGFQGK 556




 Score = 39.6 bits (80), Expect(2) = 6e-031
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -2 / +2

                                   
Query: 735 YAVRRVTNFNEITCHFLHCIQVHM 664
           +++R VT+FNEI  HF+ CI VH+
Sbjct: 569 FSLRPVTDFNEIASHFIECIYVHL 640



>gb|BQ139915.1|BQ139915 NF026E11PH1F1086 Phoma-infected Medicago truncatula cDNA clone
            NF026E11PH 5', mRNA sequence
          Length = 627

 Score =  116 bits (249), Expect(2) = 2e-029
 Identities = 51/103 (49%), Positives = 68/103 (66%)
 Frame = -2 / +3

                                                                        
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRMLGKVERVTDVVFTL 880
            SK R +QTLLPLT+KQ   A Q+S DR+   I+GV V+T+ LVGR+  K  ++T+  F L
Sbjct: 231  SKNRESQTLLPLTIKQINHALQSSDDRTGLTIDGVGVNTVTLVGRVCNKSGQITEFKFVL 410

                                                       
Query: 879  DDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGK 751
            DDGTG I+  +W +E +DA  +    N  YV + G LKGFQGK
Sbjct: 411  DDGTGTIECTKWLHEPADAMAVESILNGMYVRLYGQLKGFQGK 539




 Score = 34.5 bits (69), Expect(2) = 2e-029
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2 / +1

                              
Query: 720 VTNFNEITCHFLHCIQVHM 664
           VT+FNEI  HF  CI VH+
Sbjct: 568 VTDFNEIASHFXECIYVHL 624



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 1,083,437,176
Number of Sequences: 392609
Number of extensions: 14593640
Number of successful extensions: 53882
Number of sequences better than 1.0e-020: 5
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 46721318671
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)