TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419417.2.5
(733 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC146785.12| Medicago truncatula clone mth2-4h4, complet... 123 2e-041
gb|AC146567.10| Medicago truncatula clone mth2-99p24, compl... 129 5e-041
gb|AJ548116.1|AJ548116 AJ548116 MTAPHEU Medicago truncatula... 159 6e-038
gb|CX540984.1|CX540984 s13dNF69C09GS070_465254 Germinating ... 96 4e-033
gb|AJ548374.1|AJ548374 AJ548374 MTAPHEU Medicago truncatula... 101 5e-033
gb|BQ149056.1|BQ149056 NF087B11FL1F1092 Developing flower M... 94 7e-032
gb|CA990354.1|CA990354 EST643862 GESD Medicago truncatula c... 93 9e-032
gb|BE942254.1|BE942254 EST421833 MGHG Medicago truncatula c... 92 2e-031
gb|AW560545.1|AW560545 EST315593 DSIR Medicago truncatula c... 91 2e-031
gb|CA920978.1|CA920978 EST638696 MTUS Medicago truncatula c... 90 3e-031
gb|BF646621.1|BF646621 NF065G09EC1F1071 Elicited cell cultu... 90 3e-031
gb|BE203828.1|BE203828 EST396504 KV0 Medicago truncatula cD... 90 3e-031
gb|BQ154659.1|BQ154659 NF087D10IR1F1090 Irradiated Medicago... 95 1e-030
gb|BG448535.1|BG448535 NF037A03RT1F1018 Developing root Med... 90 7e-030
gb|AW257154.1|AW257154 EST305291 KV2 Medicago truncatula cD... 96 3e-029
emb|CR307165.1| mte1-28A13FM1 BAC end, cultivar Jemalong A1... 123 3e-027
gb|AW561018.1|AW561018 EST316066 DSIR Medicago truncatula c... 102 5e-027
gb|AC156629.26| Medicago truncatula clone mth2-143f17, comp... 114 7e-027
gb|BI311175.1|BI311175 EST5312925 GESD Medicago truncatula ... 86 1e-026
gb|BG453341.1|BG453341 NF090C01LF1F1002 Developing leaf Med... 94 3e-026
gb|BQ164894.1|BQ164894 EST610763 KVKC Medicago truncatula c... 67 1e-025
gb|BG644871.1|BG644871 EST506490 KV3 Medicago truncatula cD... 67 1e-025
gb|AW774242.1|AW774242 EST333393 KV3 Medicago truncatula cD... 67 1e-025
gb|BE941547.1|BE941547 EST421117 MGHG Medicago truncatula c... 67 1e-025
gb|BE124555.1|BE124555 EST393590 GVN Medicago truncatula cD... 67 1e-025
gb|BE942201.1|BE942201 EST421780 MGHG Medicago truncatula c... 67 1e-025
gb|BE941546.1|BE941546 EST421116 MGHG Medicago truncatula c... 67 1e-025
gb|AL371985.1|AL371985 MtBA47H02F1 MtBA Medicago truncatula... 67 1e-025
gb|BF647601.1|BF647601 NF012A07EC1F1051 Elicited cell cultu... 81 2e-025
gb|AC150786.21| Medicago truncatula clone mth2-170o9, compl... 99 2e-025
gb|CX541475.1|CX541475 s13dNF44C06GS050_466252 Germinating ... 93 8e-025
gb|BG451441.1|BG451441 NF110E02DT1F1017 Drought Medicago tr... 100 1e-024
gb|BI310646.1|BI310646 EST5312396 GESD Medicago truncatula ... 80 1e-024
gb|BI310213.1|BI310213 EST5311963 GESD Medicago truncatula ... 80 1e-024
gb|BQ155508.1|BQ155508 NF081C07IR1F1054 Irradiated Medicago... 80 1e-024
gb|AJ497352.1|AJ497352 AJ497352 MTFLOW Medicago truncatula ... 80 1e-024
gb|BI273302.1|BI273302 NF099A06FL1F1040 Developing flower M... 80 1e-024
gb|AC175537.2| Medicago truncatula clone mth2-39i6, WORKING... 101 2e-024
gb|BG455050.1|BG455050 NF113C06LF1F1039 Developing leaf Med... 93 3e-024
gb|AL379117.1|AL379117 MtBB43A03F1 MtBB Medicago truncatula... 67 9e-024
gb|DW015742.1|DW015742 EST1224703 MTY Medicago truncatula c... 52 7e-023
gb|AC140022.11| Medicago truncatula clone mth2-11g20, compl... 92 1e-022
gb|AJ547900.1|AJ547900 AJ547900 MTAPHEU Medicago truncatula... 108 1e-022
gb|BG644576.1|BG644576 EST506195 KV3 Medicago truncatula cD... 64 1e-022
gb|CG969862.1|CG969862 MBEFP69TR mth2 Medicago truncatula g... 93 1e-022
gb|CA921600.1|CA921600 EST639318 MTUS Medicago truncatula c... 71 1e-021
gb|CA921563.1|CA921563 EST639281 MTUS Medicago truncatula c... 70 1e-021
gb|BI308207.1|BI308207 EST529617 GPOD Medicago truncatula c... 64 4e-021
gb|AL365967.1|AL365967 MtBA03E01F1 MtBA Medicago truncatula... 67 9e-021
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence
Length = 149005
Score = 123 bits (263), Expect(3) = 2e-041
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2 / +2
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
A +EDGC+V+GYF WSLLDNWEW AG++SRFGLYF+DY DNL+RYPK SV+WFK L+
Sbjct: 56417 AICREDGCNVKGYFVWSLLDNWEWQAGFSSRFGLYFIDYNDNLRRYPKKSVEWFKNFLN 56593
Score = 64.3 bits (134), Expect(3) = 2e-041
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2 / +2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD N P SI+DAL D KRIKYHN YL+N+ ASIK
Sbjct: 55502 GMDDPNDPSISIKDALNDEKRIKYHNDYLSNLLASIK 55612
Score = 39.6 bits (80), Expect(3) = 2e-041
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNY+K +Y +P V ITENG
Sbjct: 54692 RSLMNYIKHKYENPLVIITENG 54757
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
Length = 141672
Score = 129 bits (276), Expect(3) = 5e-041
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DGC+V+GYFAWSLLDNWEWAAGY+SRFGLYFVDY+DNLKRYPK SVQWFK L
Sbjct: 137335 DGCNVKGYFAWSLLDNWEWAAGYSSRFGLYFVDYRDNLKRYPKQSVQWFKNFL 137493
Score = 54.7 bits (113), Expect(3) = 5e-041
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2 / +2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD N+ F S +DALKD KRI+Y +GYL+ + ASIK
Sbjct: 137129 GMDDPNNIFISKKDALKDEKRIRYFSGYLSYLQASIK 137239
Score = 41.8 bits (85), Expect(3) = 5e-041
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNY+K++Y +P V+ITENG
Sbjct: 136771 RTLMNYIKQKYGNPPVFITENG 136836
>gb|AJ548116.1|AJ548116 AJ548116 MTAPHEU Medicago truncatula cDNA clone mtaehac110005h10,
mRNA sequence
Length = 512
Score = 159 bits (341), Expect = 6e-038
Identities = 62/116 (53%), Positives = 83/116 (71%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R+L+ YVK+ YN P +YITENG D+ N P S++++L D+ RI Y +L + +I D
Sbjct: 491 RQLLLYVKKHYNDPVIYITENGRDEFNDPTLSLEESLLDTDRIDYFYRHLYYLQTAISRD 312
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+V+GYFAWSLLDN+EW +G++ RFGL FVD+KDNLKR+PK S WFK L S*
Sbjct: 311 DVNVKGYFAWSLLDNFEWESGFSLRFGLVFVDFKDNLKRHPKLSAHWFKNFLKRS* 144
>gb|CX540984.1|CX540984 s13dNF69C09GS070_465254 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 549
Score = 95.9 bits (203), Expect(2) = 4e-033
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS 349
+G +V+GYFAWSLLDN EW +G++ RFGL FVDY D+LKR+PK S WFK L S
Sbjct: 301 EGVNVKGYFAWSLLDNHEWESGFSLRFGLVFVDYNDDLKRHPKLSAHWFKNFLKKS 468
Score = 67.0 bits (140), Expect(2) = 4e-033
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +2 / +1
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ YVK +YN+P +YITENG D+ N P S++++L D+ RI Y +L V A+I+E
Sbjct: 133 LLLYVKNKYNNPVIYITENGRDEFNDPKLSLEESLLDTYRIDYFYRHLYYVQAAIRE 303
>gb|AJ548374.1|AJ548374 AJ548374 MTAPHEU Medicago truncatula cDNA clone mtaehac110001h01,
mRNA sequence
Length = 509
Score = 101 bits (216), Expect(2) = 5e-033
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / -1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
DG +V+GYFAWSLLDN+EW +G++ RFGL FVD+KDNLKR+PK S WFK L S*
Sbjct: 308 DGVNVKGYFAWSLLDNFEWESGFSLRFGLVFVDFKDNLKRHPKLSAHWFKNFLKRS* 138
Score = 60.6 bits (126), Expect(2) = 5e-033
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ YVK+ YN P +YIT NG D N P S++++L D+ RI Y +L + +I++
Sbjct: 482 RQLLLYVKKHYNDPVIYITGNGRDKFNDPTLSLEESLLDTDRIDYFYRHLYYLQTAIRD 306
>gb|BQ149056.1|BQ149056 NF087B11FL1F1092 Developing flower Medicago truncatula cDNA clone
NF087B11FL 5', mRNA sequence
Length = 533
Score = 93.6 bits (198), Expect(2) = 7e-032
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS 349
+G +V+GYFAWSL DN EW +G++ RFGL FVDY D+LKR+PK S WFK L S
Sbjct: 317 EGVNVKGYFAWSLXDNHEWESGFSLRFGLVFVDYNDHLKRHPKLSAHWFKNFLKKS 484
Score = 65.2 bits (136), Expect(2) = 7e-032
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ YVK +YN+P +YITENG D+ N P ++++L D+ RI Y +L V A+I+E
Sbjct: 149 LLLYVKNKYNNPVIYITENGRDEFNDPKLXLEESLLDTYRIDYFYRHLYYVQAAIRE 319
>gb|CA990354.1|CA990354 EST643862 GESD Medicago truncatula cDNA clone GESD-28K8, mRNA
sequence
Length = 649
Score = 92.7 bits (196), Expect(2) = 9e-032
Identities = 33/54 (61%), Positives = 44/54 (81%)
Frame = +2 / +1
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
++G ++RGYFAWSLLDN+EW++GYT RFG+ FVDYK+ L R+ K S +WFK L
Sbjct: 397 KNGVNIRGYFAWSLLDNFEWSSGYTVRFGINFVDYKNGLTRHQKLSAKWFKIFL 558
Score = 65.7 bits (137), Expect(2) = 9e-032
Identities = 24/58 (41%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++L+ ++K+ YN+P +YITENG+D+ N P S+++AL D+ RI Y++ +L + ++IK
Sbjct: 226 QELLLHIKKVYNNPLIYITENGIDEFNDPTLSLEEALMDTYRIDYYHRHLFYIRSAIK 399
>gb|BE942254.1|BE942254 EST421833 MGHG Medicago truncatula cDNA clone pMGHG-7P12, mRNA
sequence
Length = 580
Score = 91.8 bits (194), Expect(2) = 2e-031
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R LMNY+K++Y +P V+ITENGMDD N+ F S +DALKD KRI+Y +GYL+ + ASIK+
Sbjct: 333 RTLMNYIKQKYGNPPVFITENGMDDPNNIFISKKDALKDEKRIRYFSGYLSYLQASIKD 509
Score = 65.2 bits (136), Expect(2) = 2e-031
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = +2 / +3
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYT 253
+DGC+V+GYFAWSLLDNWEWAAGY+
Sbjct: 504 KDGCNVKGYFAWSLLDNWEWAAGYS 578
>gb|AW560545.1|AW560545 EST315593 DSIR Medicago truncatula cDNA clone pDSIR-27O16, mRNA
sequence
Length = 437
Score = 91.3 bits (193), Expect(2) = 2e-031
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +2 / -2
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
++G +++GYFAWSLLDN+EW++GYT RFG+ FVDYK+ L R+ K S +WFK L
Sbjct: 244 KNGVNIKGYFAWSLLDNFEWSSGYTVRFGINFVDYKNGLTRHQKLSAKWFKIFL 83
Score = 65.7 bits (137), Expect(2) = 2e-031
Identities = 24/58 (41%), Positives = 44/58 (75%)
Frame = +2 / -2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++L+ ++K+ YN+P +YITENG+D+ N P S+++AL D+ RI Y++ +L + ++IK
Sbjct: 415 QELLLHIKKVYNNPLIYITENGIDEFNDPTLSLEEALMDTYRIDYYHRHLFYIRSAIK 242
>gb|CA920978.1|CA920978 EST638696 MTUS Medicago truncatula cDNA clone MTUS-34C12, mRNA
sequence
Length = 765
Score = 89.5 bits (189), Expect(2) = 3e-031
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2 / -1
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
E G +V+GY+ WSL DN+EW +GY+ RFG+ FVDYK+ LKRY K S WFK L
Sbjct: 363 EQGANVQGYYIWSLFDNFEWCSGYSVRFGMTFVDYKNGLKRYEKLSALWFKNFL 202
Score = 67.0 bits (140), Expect(2) = 3e-031
Identities = 25/59 (42%), Positives = 43/59 (72%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ Y KE+YN+P +YITENG+++ + P S+Q++L D+ RI YH +L + ++I++
Sbjct: 534 RDLLLYTKEKYNNPLIYITENGINEYSDPTLSVQESLMDTFRIDYHYRHLYYLRSAIEQ 358
>gb|BF646621.1|BF646621 NF065G09EC1F1071 Elicited cell culture Medicago truncatula cDNA
clone NF065G09EC 5', mRNA sequence
Length = 673
Score = 89.5 bits (189), Expect(2) = 3e-031
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2 / +2
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
E G +V+GY+ WSL DN+EW +GY+ RFG+ FVDYK+ LKRY K S WFK L
Sbjct: 347 EQGANVQGYYIWSLFDNFEWCSGYSVRFGMTFVDYKNGLKRYEKLSALWFKNFL 508
Score = 67.0 bits (140), Expect(2) = 3e-031
Identities = 25/59 (42%), Positives = 43/59 (72%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ Y KE+YN+P +YITENG+++ + P S+Q++L D+ RI YH +L + ++I++
Sbjct: 176 RDLLLYTKEKYNNPLIYITENGINEYSDPTLSVQESLMDTFRIDYHYRHLYYLRSAIEQ 352
>gb|BE203828.1|BE203828 EST396504 KV0 Medicago truncatula cDNA clone pKV0-11L17, mRNA
sequence
Length = 668
Score = 89.5 bits (189), Expect(2) = 3e-031
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2 / -3
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
E G +V+GY+ WSL DN+EW +GY+ RFG+ FVDYK+ LKRY K S WFK L
Sbjct: 378 EQGANVQGYYIWSLFDNFEWCSGYSVRFGMTFVDYKNGLKRYEKLSALWFKNFL 217
Score = 67.0 bits (140), Expect(2) = 3e-031
Identities = 25/59 (42%), Positives = 43/59 (72%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ Y KE+YN+P +YITENG+++ + P S+Q++L D+ RI YH +L + ++I++
Sbjct: 549 RDLLLYTKEKYNNPLIYITENGINEYSDPTLSVQESLMDTFRIDYHYRHLYYLRSAIEQ 373
>gb|BQ154659.1|BQ154659 NF087D10IR1F1090 Irradiated Medicago truncatula cDNA clone
NF087D10IR 5', mRNA sequence
Length = 675
Score = 94.5 bits (200), Expect(2) = 1e-030
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +2 / +2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
G +V+GYFAWSLLDN+EW GYT RFG+ F+DYKD LKRY K S WFK L+
Sbjct: 509 GVNVKGYFAWSLLDNFEWHRGYTVRFGMTFIDYKDGLKRYQKLSXLWFKNFLT 667
Score = 60.2 bits (125), Expect(2) = 1e-030
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYL 154
R + Y KE+YN+P +YITENG+++ + P S++++L D RI YH +L
Sbjct: 238 RDFLIYAKEKYNNPLIYITENGINEYDDPSLSVEESLLDIYRIDYHYRHL 387
>gb|BG448535.1|BG448535 NF037A03RT1F1018 Developing root Medicago truncatula cDNA clone
NF037A03RT 5', mRNA sequence
Length = 588
Score = 90.4 bits (191), Expect(2) = 7e-030
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +2 / -3
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+DG +V+GYFAWSLLDN+EW GY R G+ FVDYK+ KRYPK S WF+ L
Sbjct: 367 KDGVNVKGYFAWSLLDNFEWTLGYRVRTGINFVDYKNGXKRYPKMSAIWFRNFL 206
Score = 61.6 bits (128), Expect(2) = 7e-030
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +2 / -3
Query: 23 VKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
+K +YN+P +YITENG+D+ N P S+++AL D+ RI Y +L + ++IK+
Sbjct: 520 LKTKYNNPLIYITENGIDELNDPTLSLEEALADTARIDYFYNHLYYLKSAIKD 362
>gb|AW257154.1|AW257154 EST305291 KV2 Medicago truncatula cDNA clone KV2-7I18, mRNA
sequence
Length = 755
Score = 95.9 bits (203), Expect(2) = 3e-029
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2 / -3
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+D DVRG+FAWSLLDN+EWA GYT RFGL +VDYK+ L R+PK+S WF L
Sbjct: 624 KDEADVRGHFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLTRHPKSSAYWFSRFL 463
Score = 54.2 bits (112), Expect(2) = 3e-029
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2 / -3
Query: 50 VYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
+Y+T+NGMDD + S+ + L D R++Y+ GYL +VA +IK++
Sbjct: 750 IYVTKNGMDDEANDSLSLNEMLDDKMRVRYYKGYLASVAQAIKDE 616
>emb|CR307165.1| mte1-28A13FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 840
Score = 123 bits (263), Expect = 3e-027
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2 / -1
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
A +EDGC+V+GYF WSLLDNWEW AG++SRFGLYF+DY DNL+RYPK SV+WFK L+
Sbjct: 270 AICREDGCNVKGYFVWSLLDNWEWQAGFSSRFGLYFIDYNDNLRRYPKKSVEWFKNFLN 94
>gb|AW561018.1|AW561018 EST316066 DSIR Medicago truncatula cDNA clone pDSIR-31G21, mRNA
sequence
Length = 649
Score = 102 bits (218), Expect(2) = 5e-027
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 167 ASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
A +DG DVRGYFAWSLLDN+EWA GYT RFGL +VDYK+ L R+PK+S WF L
Sbjct: 100 AQAMKDGADVRGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLTRHPKSSAYWFSRFL 273
Score = 39.6 bits (80), Expect(2) = 5e-027
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
NG+DD + S+ + L D R++Y GY+++VA ++K+
Sbjct: 1 NGLDDEANDSLSLHEMLDDKLRVQYFKGYVSSVAQAMKD 117
>gb|AC156629.26| Medicago truncatula clone mth2-143f17, complete sequence
Length = 130456
Score = 114 bits (243), Expect(2) = 7e-027
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = +2 / -3
Query: 149 YLNNVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWF 328
Y+ NV+ + DG +V+GYFAWSLLDN+EW GYTSRFG+YF+DY D LKRYPK S WF
Sbjct: 92723 YMFNVSKNFTRDGVNVKGYFAWSLLDNFEWGLGYTSRFGIYFIDYNDGLKRYPKMSAVWF 92544
Query: 329 KTLL 340
K L
Sbjct: 92543 KNFL 92532
Score = 98.2 bits (208), Expect(2) = 2e-023
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWS +D++EWA GYT RFG+YFVDY + +KRYPK S WFK L
Sbjct: 62052 DGANVKGYFAWSFIDDFEWANGYTMRFGIYFVDYNNGIKRYPKMSAIWFKNFL 62210
Score = 92.3 bits (195), Expect(3) = 2e-022
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW GY R G+ FVDYK+ LKRYPK S WF+ L
Sbjct: 109943 DGVNVKGYFAWSLLDNFEWTLGYRVRTGINFVDYKNGLKRYPKMSAIWFRNFL 109785
Score = 41.4 bits (84), Expect(2) = 2e-023
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFT 97
R+L+ Y+K +YN+P +YITENG + + FT
Sbjct: 61418 RELLLYIKTKYNNPLIYITENGNTNTSFIFT 61510
Score = 37.3 bits (75), Expect(2) = 7e-027
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2 / -2
Query: 11 LMNYVKERYNSPTVYITENG 70
L+ Y+K +YN+P +YITENG
Sbjct: 93231 LLLYIKTKYNNPLIYITENG 93172
Score = 35.9 bits (72), Expect(3) = 2e-022
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / -3
Query: 11 LMNYVKERYNSPTVYITENG 70
L+ Y K +YN+P +YITENG
Sbjct: 110912 LLLYTKTKYNNPLIYITENG 110853
Score = 34.5 bits (69), Expect(3) = 2e-022
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2 / -2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
G+D+ N P S+++AL D+ RI Y +L + ++IK
Sbjct: 110154 GIDELNDPTLSLEEALADTARIDYFYNHLYYLKSAIK 110044
>gb|BI311175.1|BI311175 EST5312925 GESD Medicago truncatula cDNA clone pGESD10K9 5' end,
mRNA sequence
Length = 639
Score = 86.3 bits (182), Expect(2) = 1e-026
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +2 / +3
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+DG +V+GY+AWS D++EW AGYT RFG+ +VD+ +NLKRYPK S W + L
Sbjct: 294 KDGANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVNNLKRYPKYSAFWLQKFL 455
Score = 55.1 bits (114), Expect(2) = 1e-026
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2 / +3
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ ++K+ Y +P VYITENG+ + + A KD RI+YH+ +L + +IK+
Sbjct: 129 LVTHIKDTYKNPPVYITENGIGQSRNDSIPVNVARKDGIRIRYHDSHLKFLLQAIKD 299
>gb|BG453341.1|BG453341 NF090C01LF1F1002 Developing leaf Medicago truncatula cDNA clone
NF090C01LF 5', mRNA sequence
Length = 666
Score = 94.1 bits (199), Expect(3) = 3e-026
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = +2 / +2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS*RRHT 364
G +V+GYFAWSLLDN+EW GYT RFG+ F+DYKD LKRY K S WFK L+ R +
Sbjct: 308 GVNVKGYFAWSLLDNFEWHRGYTVRFGMTFIDYKDGLKRYQKLSGLWFKNFLTLDTRIYR 487
Query: 365 RTV 373
++
Sbjct: 488 ESI 496
Score = 32.7 bits (65), Expect(3) = 3e-026
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2 / +2
Query: 56 ITENGMDDGNSPFTSIQDALKDSKRIKYHNGYL 154
+ ENG+++ + P S++++L D RI YH +L
Sbjct: 182 LLENGINEYDDPSLSVEESLLDIYRIDYHYRHL 280
Score = 30.9 bits (61), Expect(3) = 3e-026
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYIT 61
R + Y KE+YN+P +YIT
Sbjct: 130 RDFLIYAKEKYNNPLIYIT 186
>gb|BQ164894.1|BQ164894 EST610763 KVKC Medicago truncatula cDNA clone pKVKC-3D5, mRNA
sequence
Length = 825
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / -3
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 457 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 338
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / -3
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 613 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 443
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 334 HLTRHPKLSARWFRKFL 284
>gb|BG644871.1|BG644871 EST506490 KV3 Medicago truncatula cDNA clone pKV3-38H17 5' end,
mRNA sequence
Length = 805
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 350 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 469
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 194 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 364
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 473 HLTRHPKLSARWFRKFL 523
>gb|AW774242.1|AW774242 EST333393 KV3 Medicago truncatula cDNA clone pKV3-22C7, mRNA
sequence
Length = 671
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 419 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 538
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 263 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 433
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 542 HLTRHPKLSARWFRKFL 592
>gb|BE941547.1|BE941547 EST421117 MGHG Medicago truncatula cDNA clone pMGHG-4E22, mRNA
sequence
Length = 668
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +1
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 277 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 396
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +1
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 121 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 291
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 400 HLTRHPKLSARWFRKFL 450
>gb|BE124555.1|BE124555 EST393590 GVN Medicago truncatula cDNA clone pGVN-60E24, mRNA
sequence
Length = 642
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +1
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 391 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 510
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +1
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 235 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 405
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 514 HLTRHPKLSARWFRKFL 564
>gb|BE942201.1|BE942201 EST421780 MGHG Medicago truncatula cDNA clone pMGHG-7F22, mRNA
sequence
Length = 633
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 167 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 286
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 11 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 181
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 290 HLTRHPKLSARWFRKFL 340
>gb|BE941546.1|BE941546 EST421116 MGHG Medicago truncatula cDNA clone pMGHG-4E20, mRNA
sequence
Length = 627
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 275 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 394
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 119 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 289
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 398 HLTRHPKLSARWFRKFL 448
>gb|AL371985.1|AL371985 MtBA47H02F1 MtBA Medicago truncatula cDNA clone MtBA47H02 T3, mRNA
sequence
Length = 417
Score = 67.0 bits (140), Expect(3) = 1e-025
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 164 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 283
Score = 64.3 bits (134), Expect(3) = 1e-025
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 8 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 178
Score = 24.4 bits (47), Expect(3) = 1e-025
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 287 HLTRHPKLSARWFRKFL 337
>gb|BF647601.1|BF647601 NF012A07EC1F1051 Elicited cell culture Medicago truncatula cDNA
clone NF012A07EC 5', mRNA sequence
Length = 581
Score = 80.8 bits (170), Expect(2) = 2e-025
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +2 / +1
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPK 310
+DG DVRG+FAWSLLDN+EWA GYT RFGL +V+Y + L +PK
Sbjct: 424 KDGADVRGHFAWSLLDNFEWAQGYTKRFGLVYVNYXNGLTXHPK 555
Score = 56.5 bits (117), Expect(2) = 2e-025
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2 / +1
Query: 50 VYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
+Y+TENGMDD ++ S+ + L D R++Y+ GYL +VA +IK+
Sbjct: 298 IYVTENGMDDEDNDSLSLNEMLDDKMRVRYYKGYLASVAQAIKD 429
>gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete sequence
Length = 142649
Score = 99.1 bits (210), Expect(3) = 2e-025
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+G +V+GYFAWSLLDN+EW +GYT+RFG+ FVDYK+ LKR+PK S +WFK L
Sbjct: 113729 NGVNVKGYFAWSLLDNFEWTSGYTTRFGMNFVDYKNGLKRHPKLSAKWFKNFL 113887
Score = 90.9 bits (192), Expect(2) = 1e-022
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+G +++GYFAWSLLDN+EW++GYT RFG+ FVDYK+ L R+ K S +WFK L
Sbjct: 103575 NGVNIKGYFAWSLLDNFEWSSGYTVRFGINFVDYKNGLTRHQKLSAKWFKIFL 103733
Score = 37.3 bits (75), Expect(3) = 2e-025
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
++L+ YVK+ YN+P +YITENG
Sbjct: 113247 QELLLYVKKVYNNPLIYITENG 113312
Score = 36.8 bits (74), Expect(3) = 2e-025
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
G+D+ N P S+++AL D+ RI Y++ +L + ++IK
Sbjct: 113493 GIDEFNDPTLSLEEALMDTYRIDYYHRHLFYIRSAIK 113603
Score = 36.8 bits (74), Expect(2) = 1e-022
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
G+D+ N P S+++AL D+ RI Y++ +L + ++IK
Sbjct: 103349 GIDEFNDPTLSLEEALMDTYRIDYYHRHLFYIRSAIK 103459
>gb|CX541475.1|CX541475 s13dNF44C06GS050_466252 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 530
Score = 93.2 bits (197), Expect(2) = 8e-025
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+G V+GYFAWSLLDN+EW AGYT RFGL +VDYK+ L+RY K S WFK L
Sbjct: 255 NGVRVKGYFAWSLLDNFEWNAGYTLRFGLVYVDYKNGLRRYRKRSALWFKLFL 413
Score = 41.8 bits (85), Expect(2) = 8e-025
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2 / +3
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQD 109
L+ Y KE++++P +YITENG+D+ + S+ D
Sbjct: 99 LLEYTKEKFSNPIIYITENGVDEVDDGKRSLDD 197
>gb|BG451441.1|BG451441 NF110E02DT1F1017 Drought Medicago truncatula cDNA clone NF110E02DT
5', mRNA sequence
Length = 559
Score = 100 bits (212), Expect(2) = 1e-024
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW +G++ RFGL FVD+KDNLKR+PK S WFK L
Sbjct: 368 DGVNVKGYFAWSLLDNFEWESGFSLRFGLVFVDFKDNLKRHPKLSAHWFKNFL 526
Score = 36.3 bits (73), Expect(2) = 1e-024
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 20 YVKERYNSPTVYITENG 70
YVK+ YN P +YITENG
Sbjct: 8 YVKKHYNDPVIYITENG 58
>gb|BI310646.1|BI310646 EST5312396 GESD Medicago truncatula cDNA clone pGESD8L19 5' end,
mRNA sequence
Length = 792
Score = 80.3 bits (169), Expect(2) = 1e-024
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2 / +2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
G +V+GY+AWS D++EW AGYT RFG+ +VD+ + LKRYPK S W + L
Sbjct: 458 GANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVNKLKRYPKYSAFWLQKFL 613
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
L+ ++K YN+P VYITENG+ + I A KD RIKYH+ +L + IK
Sbjct: 287 LVTHIKNVYNNPPVYITENGIATYRNDSVPINVARKDGVRIKYHHDHLYYLLEGIK 454
>gb|BI310213.1|BI310213 EST5311963 GESD Medicago truncatula cDNA clone pGESD7O4 5' end,
mRNA sequence
Length = 766
Score = 80.3 bits (169), Expect(2) = 1e-024
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2 / +1
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
G +V+GY+AWS D++EW AGYT RFG+ +VD+ + LKRYPK S W + L
Sbjct: 418 GANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVNKLKRYPKYSAFWLQKFL 573
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2 / +1
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
L+ ++K YN+P VYITENG+ + I A KD RIKYH+ +L + IK
Sbjct: 247 LVTHIKNVYNNPPVYITENGIATYRNDSVPINVARKDGVRIKYHHDHLYYLLEGIK 414
>gb|BQ155508.1|BQ155508 NF081C07IR1F1054 Irradiated Medicago truncatula cDNA clone
NF081C07IR 5', mRNA sequence
Length = 648
Score = 80.3 bits (169), Expect(2) = 1e-024
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +2 / +2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
G +V+GY+AWS D++EW AGYT RFG+ +VD+ + LKRYPK S W ++ S
Sbjct: 482 GANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVNKLKRYPKYSAFWLQSSFS 640
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
L+ ++K YN+P VYITENG+ + I A KD RIKYH+ +L + IK
Sbjct: 311 LVTHIKNVYNNPPVYITENGIATYRNDSVPINVARKDGVRIKYHHDHLYYLLEGIK 478
>gb|AJ497352.1|AJ497352 AJ497352 MTFLOW Medicago truncatula cDNA clone mt--abc955108b08,
mRNA sequence
Length = 581
Score = 80.3 bits (169), Expect(2) = 1e-024
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2 / +2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
G +V+GY+AWS D++EW AGYT RFG+ +VD+ + LKRYPK S W + L
Sbjct: 254 GANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVNKLKRYPKYSAFWLQKFL 409
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
L+ ++K YN+P VYITENG+ + I A KD RIKYH+ +L + IK
Sbjct: 83 LVTHIKNVYNNPPVYITENGIATYRNDSVPINVARKDGVRIKYHHDHLYYLLEGIK 250
>gb|BI273302.1|BI273302 NF099A06FL1F1040 Developing flower Medicago truncatula cDNA clone
NF099A06FL 5', mRNA sequence
Length = 515
Score = 80.3 bits (169), Expect(2) = 1e-024
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2 / +2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
G +V+GY+AWS D++EW AGYT RFG+ +VD+ + LKRYPK S W + L
Sbjct: 176 GANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVNKLKRYPKYSAFWLQKFL 331
Score = 54.2 bits (112), Expect(2) = 1e-024
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
L+ ++K YN+P VYITENG+ + I A KD RIKYH+ +L + IK
Sbjct: 5 LVTHIKNVYNNPPVYITENGIATYRNDSVPINVARKDGVRIKYHHDHLYYLLEGIK 172
>gb|AC175537.2| Medicago truncatula clone mth2-39i6, WORKING DRAFT SEQUENCE, 18
unordered pieces
Length = 53036
Score = 101 bits (216), Expect(2) = 2e-024
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
DG +V+GYFAWSLLDN+EW +G++ RFGL FVD+KDNLKR+PK S WFK L S*
Sbjct: 51373 DGVNVKGYFAWSLLDNFEWESGFSLRFGLVFVDFKDNLKRHPKLSAHWFKNFLKRS* 51543
Score = 100 bits (213), Expect(2) = 1e-023
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
DG +V+GYFAWSLLDN EW +GYT RFGL FVD+K+ +KR+PK S QWFK L S*
Sbjct: 43662 DGVNVKGYFAWSLLDNMEWDSGYTVRFGLVFVDFKNGVKRHPKLSAQWFKNFLKKS* 43832
Score = 40.5 bits (82), Expect(2) = 2e-024
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R+L+ Y+K +YN+P +YITENG
Sbjct: 43099 RQLLLYIKRQYNNPVIYITENG 43164
Score = 38.6 bits (78), Expect(2) = 1e-023
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENG 70
L+ YVK +YN+P +YITENG
Sbjct: 39521 LLLYVKNKYNNPVIYITENG 39580
>gb|BG455050.1|BG455050 NF113C06LF1F1039 Developing leaf Medicago truncatula cDNA clone
NF113C06LF 5', mRNA sequence
Length = 582
Score = 93.2 bits (197), Expect(2) = 3e-024
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+G V+GYFAWSLLDN+EW AGYT RFGL +VDYK+ L+RY K S WFK L
Sbjct: 154 NGVRVKGYFAWSLLDNFEWNAGYTLRFGLVYVDYKNGLRRYRKRSALWFKLFL 312
Score = 40.0 bits (81), Expect(2) = 3e-024
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2 / +1
Query: 14 MNYVKERYNSPTVYITENGMDDGNSPFTSIQD 109
+ Y KE++++P +YITENG+D+ + S+ D
Sbjct: 1 LEYTKEKFSNPIIYITENGVDEVDDGKRSLDD 96
>gb|AL379117.1|AL379117 MtBB43A03F1 MtBB Medicago truncatula cDNA clone MtBB43A03 T3, mRNA
sequence
Length = 331
Score = 67.0 bits (140), Expect(2) = 9e-024
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +1
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 181 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 300
Score = 64.3 bits (134), Expect(2) = 9e-024
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +1
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 25 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 195
>gb|DW015742.1|DW015742 EST1224703 MTY Medicago truncatula cDNA clone MTYA914, mRNA
sequence
Length = 397
Score = 52.4 bits (108), Expect(3) = 7e-023
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2 / +3
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGL 268
G +V+GYFAWSLLDN+EW+ GYT R L
Sbjct: 144 GVNVQGYFAWSLLDNFEWSDGYTVRLEL 227
Score = 49.6 bits (102), Expect(3) = 7e-023
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = +2 / +3
Query: 41 SPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+PT+ ITENGM++ N S+++AL D+ RI Y+ +L V+++I+
Sbjct: 3 NPTIIITENGMNEDNDSTLSLEEALMDTNRIDYYYRHLYYVSSAIR 140
Score = 44.1 bits (90), Expect(3) = 7e-023
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 260 FGLYFVDYKDNLKRYPKNSVQWFKTLL 340
FG+ FVDY+++LKR+PK S +WF+ L
Sbjct: 218 FGINFVDYENDLKRHPKLSARWFRKFL 298
>gb|AC140022.11| Medicago truncatula clone mth2-11g20, complete sequence
Length = 104305
Score = 92.3 bits (195), Expect(3) = 1e-022
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW GY R G+ FVDYK+ LKRYPK S WF+ L
Sbjct: 102839 DGVNVKGYFAWSLLDNFEWTLGYRVRTGINFVDYKNGLKRYPKMSAIWFRNFL 102997
Score = 35.9 bits (72), Expect(3) = 1e-022
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENG 70
L+ Y K +YN+P +YITENG
Sbjct: 101870 LLLYTKTKYNNPLIYITENG 101929
Score = 34.5 bits (69), Expect(3) = 1e-022
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2 / +1
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
G+D+ N P S+++AL D+ RI Y +L + ++IK
Sbjct: 102628 GIDELNDPTLSLEEALADTARIDYFYNHLYYLKSAIK 102738
>gb|AJ547900.1|AJ547900 AJ547900 MTAPHEU Medicago truncatula cDNA clone mtaehac110004c05,
mRNA sequence
Length = 292
Score = 108 bits (230), Expect = 1e-022
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +2 / -3
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+DG +V+GYFAWSLLDN+EW GYTSRFG+YF+DY D LKRYPK S WFK L
Sbjct: 260 KDGVNVKGYFAWSLLDNFEWGLGYTSRFGIYFIDYNDGLKRYPKTSAVWFKNFL 99
>gb|BG644576.1|BG644576 EST506195 KV3 Medicago truncatula cDNA clone pKV3-37N21 5' end,
mRNA sequence
Length = 754
Score = 64.3 bits (134), Expect(2) = 1e-022
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +1
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 442 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 612
Score = 63.4 bits (132), Expect(2) = 1e-022
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW YT RFG+ FVDY++
Sbjct: 598 SAMRQGVKVQGYFAWSLLDNFEWNDRYTVRFGINFVDYEN 717
>gb|CG969862.1|CG969862 MBEFP69TR mth2 Medicago truncatula genomic clone 45L18, DNA
sequence
Length = 937
Score = 93.2 bits (197), Expect(2) = 1e-022
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +2 / -2
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
G +V+GYFAWSLLDN+EW GYT RFG+ FVDYK+ LKRY K S WF+ LSS
Sbjct: 420 GVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFQNFLSS 259
Score = 36.8 bits (74), Expect(2) = 1e-022
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R + VKE+YN+P +YITENG
Sbjct: 811 RDFLIQVKEKYNNPLIYITENG 746
>gb|CA921600.1|CA921600 EST639318 MTUS Medicago truncatula cDNA clone MTUS-42C6, mRNA
sequence
Length = 730
Score = 71.2 bits (149), Expect(3) = 1e-021
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2 / -3
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDY 283
G DVRGYFAWSLLDN+EW GYT RFGL+ VDY
Sbjct: 533 GADVRGYFAWSLLDNFEWLQGYTVRFGLHHVDY 435
Score = 48.3 bits (99), Expect(3) = 1e-021
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +2 / -3
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
K++ YVK RYN+ ++ITENG + ++P + + L D R Y G+L ++ +I++
Sbjct: 707 KIVTYVKTRYNNTPMFITENGYGELDNPNNTEEQYLNDFDRKNYMAGHLLSLLEAIRK 534
Score = 22.6 bits (43), Expect(3) = 1e-021
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2 / -3
Query: 293 LKRYPKNSVQWFKTLLS 343
LKR P+ S W+K ++
Sbjct: 428 LKRTPRLSANWYKEFIA 378
>gb|CA921563.1|CA921563 EST639281 MTUS Medicago truncatula cDNA clone MTUS-41H2, mRNA
sequence
Length = 713
Score = 70.3 bits (147), Expect(3) = 1e-021
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDY 283
+G DVRGYFAWSLLDN+EW G+T RFGLY VD+
Sbjct: 387 EGADVRGYFAWSLLDNFEWLYGFTVRFGLYHVDF 286
Score = 36.3 bits (73), Expect(3) = 1e-021
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
+K + YVK+RYN+ ++ITENG
Sbjct: 650 KKTLTYVKDRYNNTPMFITENG 585
Score = 35.4 bits (71), Expect(3) = 1e-021
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2 / -3
Query: 89 PFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
P + ++ L D KRI Y +G+LNN+ SI+E
Sbjct: 477 PNNTKEEYLNDIKRINYMSGHLNNLGESIRE 385
>gb|BI308207.1|BI308207 EST529617 GPOD Medicago truncatula cDNA clone pGPOD-2M24 5' end,
mRNA sequence
Length = 618
Score = 64.3 bits (134), Expect(2) = 4e-021
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +2 / +3
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
L+ Y KE+YN+PT+ ITENGM++ N P S+++AL D+ RI Y +L + +++++
Sbjct: 357 LLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQ 527
Score = 58.3 bits (121), Expect(2) = 4e-021
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2 / +3
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYF 274
S G V+GYFAWSLLDN+EW GYT RFG+ F
Sbjct: 513 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINF 617
>gb|AL365967.1|AL365967 MtBA03E01F1 MtBA Medicago truncatula cDNA clone MtBA03E01 T3, mRNA
sequence
Length = 454
Score = 67.0 bits (140), Expect(3) = 9e-021
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2 / +3
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
S G V+GYFAWSLLDN+EW GYT RFG+ FVDY++
Sbjct: 168 SAMRQGVKVQGYFAWSLLDNFEWNDGYTVRFGINFVDYEN 287
Score = 47.3 bits (97), Expect(3) = 9e-021
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2 / +2
Query: 11 LMNYVKERYNSPTVYITENGMDDGNSPFTSI 103
L+ Y KE+YN+PT+ ITENGM++ N P S+
Sbjct: 11 LLLYTKEKYNNPTIIITENGMNEVNDPTLSL 103
Score = 24.4 bits (47), Expect(3) = 9e-021
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 290 NLKRYPKNSVQWFKTLL 340
+L R+PK S +WF+ L
Sbjct: 291 HLTRHPKLSARWFRKFL 341
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 507,024,494
Number of Sequences: 392609
Number of extensions: 4922412
Number of successful extensions: 23132
Number of sequences better than 1.0e-020: 59
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 23822211105
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)