TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276642.2.1
(1062 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW736158.1|AW736158 EST332144 KV3 Medicago truncatula cD... 255 1e-070
gb|BI272677.1|BI272677 NF027H05FL1F1047 Developing flower M... 215 1e-057
gb|AC155228.11| Medicago truncatula clone mth2-139i19, comp... 110 3e-053
gb|AC171166.3| Medicago truncatula chromosome 7 clone mth2-... 106 1e-050
gb|CG964558.1|CG964558 MBEHF62TF mth2 Medicago truncatula g... 92 3e-049
emb|CR932966.2| Medicago truncatula chromosome 5 clone mth2... 108 2e-045
gb|BG588598.1|BG588598 EST490407 MHRP- Medicago truncatula ... 161 3e-040
gb|CX541899.1|CX541899 s13dNF0BC06GS050_467106 Germinating ... 159 2e-039
gb|BE239778.1|BE239778 EST403827 MHRP- Medicago truncatula ... 148 8e-039
gb|AL369527.1|AL369527 MtBA31F08F1 MtBA Medicago truncatula... 146 4e-038
gb|BQ148300.1|BQ148300 NF065H06FL1F1060 Developing flower M... 160 5e-038
gb|BF638251.1|BF638251 NF053F01PL1F1013 Phosphate starved l... 159 7e-038
gb|CB893477.1|CB893477 EST646269 HOGA Medicago truncatula c... 155 7e-038
gb|BE320334.2|BE320334 NF026F12RT1F1095 Developing root Med... 157 3e-037
gb|AJ498106.1|AJ498106 AJ498106 MTPOSE Medicago truncatula ... 148 1e-036
gb|BE239974.1|BE239974 EST404023 MHRP- Medicago truncatula ... 148 2e-034
gb|AL382871.1|AL382871 MtBC10D12F1 MtBC Medicago truncatula... 133 4e-034
gb|AJ497188.1|AJ497188 AJ497188 MTFLOW Medicago truncatula ... 140 4e-032
gb|AJ497191.1|AJ497191 AJ497191 MTFLOW Medicago truncatula ... 140 4e-032
gb|AJ497314.1|AJ497314 AJ497314 MTFLOW Medicago truncatula ... 140 4e-032
gb|CX541857.1|CX541857 s13dNF71F05GS047_467022 Germinating ... 140 4e-032
gb|CA922392.1|CA922392 EST640110 MTUS Medicago truncatula c... 138 2e-031
emb|CR500439.1| mth2-177B20RM1 BAC end, cultivar Jemalong A... 134 3e-030
gb|AC146567.10| Medicago truncatula clone mth2-99p24, compl... 134 3e-030
gb|AW687044.2|AW687044 NF005D03RT1F1028 Developing root Med... 117 4e-030
gb|CA922495.1|CA922495 EST640213 MTUS Medicago truncatula c... 128 6e-030
gb|BE239899.1|BE239899 EST403948 MHRP- Medicago truncatula ... 129 9e-029
gb|BQ148049.1|BQ148049 NF058B06FL1F1057 Developing flower M... 124 1e-028
gb|CG925890.1|CG925890 MBEJS57TRB mth2 Medicago truncatula ... 65 1e-028
gb|BQ148467.1|BQ148467 NF068F08FL1F1075 Developing flower M... 110 2e-027
gb|AL377148.1|AL377148 MtBB29F10F1 MtBB Medicago truncatula... 119 2e-027
gb|AW126197.2|AW126197 N100042e rootphos(-) Medicago trunca... 114 1e-026
gb|BG588241.1|BG588241 EST490050 MHRP- Medicago truncatula ... 119 9e-026
gb|AC151708.6| Medicago truncatula clone mth2-15h5, complet... 66 2e-025
gb|AC169788.4| Medicago truncatula clone mth2-28c18, comple... 66 4e-025
gb|AC134967.20| Medicago truncatula clone mth2-26b8, comple... 66 4e-025
gb|BQ147584.1|BQ147584 NF044D11FL1F1093 Developing flower M... 86 4e-023
gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone m... 63 2e-022
gb|BG453833.1|BG453833 NF095C05LF1F1035 Developing leaf Med... 99 7e-022
emb|CR509524.1| mth4-20B22FM1 BAC end, cultivar Jemalong A1... 89 7e-022
gb|CG938179.1|CG938179 MBEGR39TF mth2 Medicago truncatula g... 56 8e-022
gb|CG956780.1|CG956780 MBEDR60TRC mth2 Medicago truncatula ... 88 4e-021
emb|CR487088.1| mth2-139D4FM1 BAC end, cultivar Jemalong A1... 88 4e-021
>gb|AW736158.1|AW736158 EST332144 KV3 Medicago truncatula cDNA clone pKV3-5D16, mRNA sequence
Length = 583
Score = 255 bits (551), Expect(2) = 1e-070
Identities = 93/138 (67%), Positives = 117/138 (84%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD Y K VY LDFPT P+ G P + TSVIN +++ F+EI+ QNND+ + TYH
Sbjct: 33 PATPIRLADHYKLKGVYKLDFPTKPLTGSPRVETSVINGSFRGFMEIILQNNDTKMHTYH 212
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYAF+VVGMD+G+W+ENSRGTYNKWDG++R T QV+PGAWTAV++SLD+ G WN+RTE
Sbjct: 213 LSGYAFFVVGMDFGDWSENSRGTYNKWDGIARSTAQVYPGAWTAVLVSLDNVGVWNLRTE 392
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD+WYLGQETYIRVV+P
Sbjct: 393 NLDSWYLGQETYIRVVNP 446
Score = 149 bits (321), Expect = 5e-035
Identities = 81/138 (58%), Positives = 92/138 (66%)
Frame = +1 / -1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G TTLM VS*PRYH SRFSV FQ P LS ++ TAVHAPG T V+R PSHLL VP LF
Sbjct: 445 GLTTLMYVS*PRYHESRFSVLRFQTPTLSRETKTAVHAPG*TCAVERAIPSHLLYVPLLF 266
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
S SP SIPTT+NAYP *V + SLF + IS L + L+TDV G P G VGKSS
Sbjct: 265 SDQSPKSIPTTKNAYPLK**VCILVSLFWSIISINPLKLPLITDVSTRGDPVRGFVGKSS 86
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ T F SA+L GV+G
Sbjct: 85 LYTPFNL*WSASLIGVAG 32
Score = 104 bits (222), Expect = 2e-021
Identities = 46/105 (43%), Positives = 66/105 (62%)
Frame = +3 / -3
Query: 612 HHLSNIIASIWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNT 791
H ++++ + + +PDV LT+IP ++VFC IP S VK + PCSR +L T +
Sbjct: 476 HRQLSLVSRLRVDNPDVCFLTKIP*IKVFCS*IPNSNIVKGDQNCCPCSRINLCCRTSYS 297
Query: 792 IPLVVSPTAILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQK 926
IPLV+ AIL P++ VH YN +CIS V+ + VIVL+YNF K
Sbjct: 296 IPLVICTPAILRPISEVHPYNKKCISTQVISMHLGVIVLEYNFHK 162
Score = 33.6 bits (67), Expect(2) = 1e-070
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2 / +3
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQK 555
N TE+ PDN L CG L+ QK QK
Sbjct: 456 NKTELPMPDNALKCGRLQHLQKPQK 530
>gb|BI272677.1|BI272677 NF027H05FL1F1047 Developing flower Medicago truncatula cDNA clone
NF027H05FL 5', mRNA sequence
Length = 498
Score = 215 bits (463), Expect(2) = 1e-057
Identities = 76/111 (68%), Positives = 98/111 (88%)
Frame = -2 / +2
Query: 974 GPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKW 795
G P + TSVIN +++ F+EI+ QNND+ + TYH+ GYAF+VVGMD+G+W+ENSRGTYNKW
Sbjct: 2 GSPRVETSVINGSFRGFMEIILQNNDTKMHTYHLSGYAFFVVGMDFGDWSENSRGTYNKW 181
Query: 794 DGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
DG++R T QV+PGAWTAV++SLD+ G WN+RTENLD+WYLGQETYIRVV+P
Sbjct: 182 DGIARSTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNP 334
Score = 128 bits (275), Expect = 1e-028
Identities = 67/111 (60%), Positives = 75/111 (67%)
Frame = +1 / -1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G TTLM VS*PRYH SRFSV FQ P LS ++ TAVHAPG T V+R PSHLL VP LF
Sbjct: 333 GLTTLMYVS*PRYHESRFSVLRFQTPTLSRETKTAVHAPG*TCAVERAIPSHLLYVPLLF 154
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGP 975
S SP SIPTT+NAYP *V + SLF + IS L + L+TDV G P
Sbjct: 153 SDQSPKSIPTTKNAYPLK**VCILVSLFWSIISINPLKLPLITDVSTRGDP 1
Score = 104 bits (222), Expect = 2e-021
Identities = 46/105 (43%), Positives = 66/105 (62%)
Frame = +3 / -3
Query: 612 HHLSNIIASIWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNT 791
H ++++ + + +PDV LT+IP ++VFC IP S VK + PCSR +L T +
Sbjct: 364 HRQLSLVSRLRVDNPDVCFLTKIP*IKVFCS*IPNSNIVKGDQNCCPCSRINLCCRTSYS 185
Query: 792 IPLVVSPTAILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQK 926
IPLV+ AIL P++ VH YN +CIS V+ + VIVL+YNF K
Sbjct: 184 IPLVICTPAILRPISEVHPYNKKCISTQVISMHLGVIVLEYNFHK 50
Score = 30.9 bits (61), Expect(2) = 1e-057
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2 / +2
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQK 555
N TE+ PDN L CG L+ K QK
Sbjct: 344 NKTELPMPDNALKCGRLQHLXKPQK 418
>gb|AC155228.11| Medicago truncatula clone mth2-139i19, complete sequence
Length = 112322
Score = 110 bits (235), Expect(4) = 3e-053
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD Y K VY LDFPT P+ G P + TSVIN +++ F+EI+ QNND+ + TYH
Sbjct: 41331 PATPIRLADHYKLKGVYKLDFPTKPLTGSPRVETSVINGSFRGFMEIILQNNDTKMHTYH 41510
Query: 875 IDGYAFWVVGMD 840
+ GYAF+VVG D
Sbjct: 41511 LSGYAFFVVG*D 41546
Score = 91.8 bits (194), Expect(4) = 3e-053
Identities = 33/42 (78%), Positives = 40/42 (95%)
Frame = -2 / +1
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+PGAWTAV++SLD+ G WN+RTENLD+WYLGQETYIRVV+P
Sbjct: 42115 VYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNP 42240
Score = 65.2 bits (136), Expect(3) = 3e-021
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = +1 / -1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT* 771
G TTLM VS*PRYH SRFSV FQ P LS ++ TAVHAPG T*
Sbjct: 42239 GLTTLMYVS*PRYHESRFSVLRFQTPTLSRETKTAVHAPG*T* 42111
Score = 62.9 bits (131), Expect(4) = 3e-053
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = -2 / +1
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQVF 762
MD+G+W+ENSRGTYNKWDG++R T QV+
Sbjct: 41629 MDFGDWSENSRGTYNKWDGIARSTAQVY 41712
Score = 60.6 bits (126), Expect(3) = 3e-021
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = +1 / -2
Query: 841 SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSSV*TSFL 1020
S PTT+NAYP *V + SLF + IS L + L+TDV G P G VGKSS+ T F
Sbjct: 41545 SYPTTKNAYPLK**VCILVSLFWSIISINPLKLPLITDVSTRGDPVRGFVGKSSLYTPFN 41366
Query: 1021 SYRSANLRGVSG 1056
SA+L GV+G
Sbjct: 41365 L*WSASLIGVAG 41330
Score = 34.1 bits (68), Expect(3) = 3e-021
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / -1
Query: 766 T*VVQRETPSHLL*VPRLFSVHSP*SI 846
T V+R PSHLL VP LFS SP SI
Sbjct: 41708 TCAVERAIPSHLLYVPLLFSDQSPKSI 41628
Score = 29.5 bits (58), Expect(4) = 3e-053
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQK 564
N TE+ PDN L CG L+ QK
Sbjct: 42250 NKTELPMPDNALKCGRLQHLQK 42315
>gb|AC171166.3| Medicago truncatula chromosome 7 clone mth2-119c4, *** SEQUENCING IN
PROGRESS ***, 3 ordered pieces
Length = 128881
Score = 106 bits (227), Expect(4) = 1e-050
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = -2 / -2
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL LA Y VY LDFP ++ P + S+IN TY+ F+EI+FQNND+TVQ+Y
Sbjct: 123015 PPSTPLTLAQHYKILGVYKLDFPNRWMNRPSKVDVSLINGTYRGFMEIIFQNNDTTVQSY 122836
Query: 878 HIDGYAFWVVGMDY 837
H+DGYAF+VVG D+
Sbjct: 122835 HLDGYAFFVVG*DF 122794
Score = 82.2 bits (173), Expect(4) = 1e-050
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = -2 / -2
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNGGYN 627
VFPGAWTA+++SLD+ G WN+R ENL++WYLGQE+Y++VV+ N
Sbjct: 121698 VFPGAWTAILVSLDNAGIWNLRAENLNSWYLGQESYLQVVNTENDSN 121558
Score = 70.7 bits (148), Expect(3) = 2e-021
Identities = 38/74 (51%), Positives = 46/74 (62%)
Frame = +1 / +2
Query: 841 SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSSV*TSFL 1020
S PTT+NAYPS W* WTV SLF* IS K L V LM D G I + GKSS+ T +
Sbjct: 122798 SHPTTKNAYPSKW*DWTVVSLF*KIISIKPL*VPLMRDTSTLEGLFIHLFGKSSLYTPRI 122977
Query: 1021 SYRSANLRGVSGGE 1062
A+++GV GG+
Sbjct: 122978 L*CCASVKGVEGGK 123019
Score = 69.3 bits (145), Expect(4) = 1e-050
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -2 / -3
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQVF 762
MD+G WTENSR TYNKWDGV+RCTTQVF
Sbjct: 122699 MDFGAWTENSRSTYNKWDGVARCTTQVF 122616
Score = 46.0 bits (94), Expect(3) = 2e-021
Identities = 24/41 (58%), Positives = 25/41 (60%)
Frame = +1 / +2
Query: 649 TTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT* 771
TT * S PRY RFS R FQ P LS D+ AV APG T*
Sbjct: 121580 TT*R*DSWPRYQELRFSARRFQMPALSRDTKMAVQAPGKT* 121702
Score = 44.6 bits (91), Expect(3) = 2e-021
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 763 NT*VVQRETPSHLL*VPRLFSVHSP*SI 846
NT VVQR TPSHLL*V LFSVH+P S+
Sbjct: 122617 NTCVVQRATPSHLL*VLLLFSVHAPKSM 122700
Score = 28.1 bits (55), Expect(4) = 1e-050
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 608 PDNMLYCGLLKDKQK 564
PDN +YCGLL Q+
Sbjct: 121545 PDNAIYCGLLSSLQR 121501
>gb|CG964558.1|CG964558 MBEHF62TF mth2 Medicago truncatula genomic clone 55K4, DNA sequence
Length = 911
Score = 91.8 bits (194), Expect(3) = 3e-049
Identities = 33/42 (78%), Positives = 40/42 (95%)
Frame = -2 / +1
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
V+PGAWTAV++SLD+ G WN+RTENLD+WYLGQETYIRVV+P
Sbjct: 733 VYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNP 858
Score = 86.3 bits (182), Expect(3) = 3e-049
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = -2 / +3
Query: 1001 LDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMD 840
LDFPT P+ G P + TSVIN +++ F+EI+ QNND+ + TYH+ GYAF+VVG D
Sbjct: 3 LDFPTKPLTGSPRVETSVINGSFRGFMEIILQNNDTKMHTYHLSGYAFFVVG*D 164
Score = 65.2 bits (136), Expect(3) = 2e-022
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = +1 / -1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT* 771
G TTLM VS*PRYH SRFSV FQ P LS ++ TAVHAPG T*
Sbjct: 857 GLTTLMYVS*PRYHESRFSVLRFQTPTLSRETKTAVHAPG*T* 729
Score = 62.9 bits (131), Expect(3) = 3e-049
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = -2 / +1
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQVF 762
MD+G+W+ENSRGTYNKWDG++R T QV+
Sbjct: 247 MDFGDWSENSRGTYNKWDGIARSTAQVY 330
Score = 50.6 bits (104), Expect(3) = 2e-022
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = +1 / -2
Query: 841 SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
S PTT+NAYP *V + SLF + IS L + L+TDV G P G VGKSS
Sbjct: 163 SYPTTKNAYPLK**VCILVSLFWSIISINPLKLPLITDVSTRGDPVRGFVGKSS 2
Score = 34.1 bits (68), Expect(3) = 2e-022
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / -1
Query: 766 T*VVQRETPSHLL*VPRLFSVHSP*SI 846
T V+R PSHLL VP LFS SP SI
Sbjct: 326 TCAVERAIPSHLLYVPLLFSDQSPKSI 246
>emb|CR932966.2| Medicago truncatula chromosome 5 clone mth2-45l22, COMPLETE SEQUENCE
Length = 112211
Score = 108 bits (230), Expect(4) = 2e-045
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -2 / -1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
PD P RLAD + +Y LDFP+ P++ PVI S+IN+TYK F+EIV QNNDS+VQ +H
Sbjct: 25568 PDVPFRLADNNQLRGIYKLDFPSKPMNRTPVIDRSIINATYKGFIEIVLQNNDSSVQNFH 25389
Query: 875 IDGYAFWVVG 846
+DGY+F+VVG
Sbjct: 25388 LDGYSFFVVG 25359
Score = 88.1 bits (186), Expect(4) = 2e-045
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = -2 / -1
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
QVFPG WTA+++SLD+ G WN+R ENLD WYLGQETY+R+V+P
Sbjct: 24689 QVFPGGWTAILVSLDNVGSWNLRAENLDRWYLGQETYLRIVNP 24561
Score = 36.8 bits (74), Expect(4) = 2e-045
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 844 WTMVSGLRIAVGLTTSGMVFLVARLRC 764
WTMV G +I LT GM +L A+LRC
Sbjct: 25268 WTMVIGPKIQETLTIGGMQYLAAQLRC 25188
Score = 35.0 bits (70), Expect(4) = 2e-045
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TE AP+N+LYCG LK KQK
Sbjct: 24545 TETGAPENVLYCGPLKYKQK 24486
>gb|BG588598.1|BG588598 EST490407 MHRP- Medicago truncatula cDNA clone pMHRP-53P2, mRNA
sequence
Length = 820
Score = 161 bits (347), Expect(2) = 3e-040
Identities = 60/123 (48%), Positives = 89/123 (72%)
Frame = -2 / +3
Query: 1007 YTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEW 828
Y T P G ++T+V+ + + ++EIVFQN +++VQ++HIDGY+F+VVG G+W
Sbjct: 141 YVGGISTSPTGGNAYLQTAVMGANFHEYVEIVFQNWENSVQSWHIDGYSFFVVGFGSGQW 320
Query: 827 TENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVV 648
T NSRG YN D V+RCTTQV+P +WTA+ ++LD+ G WN+R+EN + YLGQ+ Y+RV
Sbjct: 321 TPNSRGRYNLRDTVARCTTQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVY 500
Query: 647 DPN 639
P+
Sbjct: 501 TPS 509
Score = 25.8 bits (50), Expect(2) = 3e-040
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2 / +3
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTPL+LAD ++ V+
Sbjct: 90 PDTPLKLADYFNIPGVF 140
>gb|CX541899.1|CX541899 s13dNF0BC06GS050_467106 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 562
Score = 159 bits (342), Expect(2) = 2e-039
Identities = 58/116 (50%), Positives = 86/116 (74%)
Frame = -2 / +2
Query: 998 DFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTEN 819
D T P +GP I TSV+ ++ +F+E+VFQNN++T+Q++H+DGY FWVVG G+WT+
Sbjct: 155 DIQTTPSNGPAHIATSVLRTSLHDFIEVVFQNNENTMQSWHLDGYDFWVVGYGSGQWTDA 334
Query: 818 SRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
SR TYN D ++R T QV+P +WTA+++SLD+ G WN+R+ + YLGQ+ Y+RV
Sbjct: 335 SRSTYNLVDALTRHTAQVYPNSWTAILVSLDNQGMWNLRSAIWERQYLGQQLYLRV 502
Score = 24.9 bits (48), Expect(2) = 2e-039
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 1055 PDTPLRLADLYD 1020
PDTPL+LAD ++
Sbjct: 101 PDTPLKLADYFN 136
>gb|BE239778.1|BE239778 EST403827 MHRP- Medicago truncatula cDNA clone pMHRP-38E6, mRNA
sequence
Length = 524
Score = 148 bits (318), Expect(2) = 8e-039
Identities = 52/71 (73%), Positives = 66/71 (92%)
Frame = -2 / +1
Query: 854 VVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYL 675
VV MD+G+W+ENS+GTYNKWDG++R T QV+PGAWTAV++SLD+ G WN+RTENLD+WYL
Sbjct: 1 VVRMDFGDWSENSKGTYNKWDGIARSTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYL 180
Query: 674 GQETYIRVVDP 642
GQETYI+VV+P
Sbjct: 181 GQETYIKVVNP 213
Score = 34.1 bits (68), Expect(2) = 8e-039
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQKPHGSRS 537
N TE+ PDN L CG L+ QK QK S S
Sbjct: 223 NKTELPMPDNALKCGRLQHLQKPQKIISSAS 315
>gb|AL369527.1|AL369527 MtBA31F08F1 MtBA Medicago truncatula cDNA clone MtBA31F08 T3, mRNA
sequence
Length = 369
Score = 146 bits (313), Expect(2) = 4e-038
Identities = 52/75 (69%), Positives = 66/75 (88%)
Frame = -2 / +1
Query: 866 YAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLD 687
+ F+ GMD+G+W+ NS GTYNKWDG++R T QV+PGAWTAV++SLD+ G WN+RTENLD
Sbjct: 28 FFFFDGGMDFGDWSPNSPGTYNKWDGIARSTAQVYPGAWTAVLVSLDNVGVWNLRTENLD 207
Query: 686 TWYLGQETYIRVVDP 642
+WYLGQETYIRVV+P
Sbjct: 208 SWYLGQETYIRVVNP 252
Score = 34.1 bits (68), Expect(2) = 4e-038
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQKPHGSRS 537
N TE+ PDN L CG L+ QK QK S S
Sbjct: 262 NKTELPMPDNALKCGRLQHLQKPQKIISSAS 354
>gb|BQ148300.1|BQ148300 NF065H06FL1F1060 Developing flower Medicago truncatula cDNA clone
NF065H06FL 5', mRNA sequence
Length = 629
Score = 160 bits (343), Expect = 5e-038
Identities = 61/111 (54%), Positives = 85/111 (76%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ + Y++F+EIVFQNN++ VQ+YH+DGY+F+VVGMD G+WT +SR Y
Sbjct: 10 PTGGGLYLDTSVMQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTSSRNGY 189
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D V+RCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 190 NLRDAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRV 342
>gb|BF638251.1|BF638251 NF053F01PL1F1013 Phosphate starved leaf Medicago truncatula cDNA
clone NF053F01PL 5', mRNA sequence
Length = 454
Score = 159 bits (342), Expect = 7e-038
Identities = 60/107 (56%), Positives = 84/107 (78%)
Frame = -2 / +1
Query: 971 PPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWD 792
P + TSV+ + Y++F+EIVFQNN++ VQ+YH+DGY+F+VVGMD G+WT +SR YN D
Sbjct: 4 PVYLDTSVMQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTSSRNGYNLRD 183
Query: 791 GVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
V+RCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 184 AVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRV 324
>gb|CB893477.1|CB893477 EST646269 HOGA Medicago truncatula cDNA clone HOGA-28A19, mRNA
sequence
Length = 961
Score = 155 bits (333), Expect(2) = 7e-038
Identities = 61/107 (57%), Positives = 80/107 (74%)
Frame = -2 / +2
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
TSV+ + ++ F+EIVFQN++S VQ++HIDGY+FWVVGMD G WT NSR YN D VSR
Sbjct: 473 TSVMGADFRAFVEIVFQNHESIVQSWHIDGYSFWVVGMDGGVWTPNSRNQYNLRDAVSRS 652
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNG 636
TTQV+P +WTA+ ++LD+ G WNVR+E YLGQ+ Y+RV G
Sbjct: 653 TTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAG 793
Score = 24.0 bits (46), Expect(2) = 7e-038
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 1058 PPDTPLRLADLY 1023
P DTPL+LAD +
Sbjct: 368 PADTPLKLADYF 403
>gb|BE320334.2|BE320334 NF026F12RT1F1095 Developing root Medicago truncatula cDNA clone
NF026F12RT 5', mRNA sequence
Length = 429
Score = 157 bits (337), Expect = 3e-037
Identities = 57/112 (50%), Positives = 86/112 (76%)
Frame = -2 / +2
Query: 974 GPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKW 795
G ++T+V+ + + ++EIVFQN +++VQ++HIDGY+F+VVG G+WT NSRG YN
Sbjct: 2 GNAYLQTAVMGANFHEYVEIVFQNWENSVQSWHIDGYSFFVVGFGSGQWTPNSRGRYNLR 181
Query: 794 DGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
D V+RCTTQV+P +WTA+ ++LD+ G WN+R+EN + YLGQ+ Y+RV P+
Sbjct: 182 DTVARCTTQVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPS 337
>gb|AJ498106.1|AJ498106 AJ498106 MTPOSE Medicago truncatula cDNA clone mt--acc955201b06,
mRNA sequence
Length = 601
Score = 148 bits (317), Expect(2) = 1e-036
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ + Y+ F+EIVFQN++ +Q+YH+DGY+F+VVGMD G+WT + R Y
Sbjct: 154 PSGGGIYLDTSVMQTDYRTFVEIVFQNDEDILQSYHLDGYSFFVVGMDGGQWTSDKRNQY 333
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D VSR TTQV+P +WTA+ + LD+ G WN+R+E YLGQ+ Y+RV
Sbjct: 334 NLRDAVSRSTTQVYPKSWTAIYVPLDNVGMWNLRSEFWARQYLGQQFYMRV 486
Score = 27.2 bits (53), Expect(2) = 1e-036
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTPL+LAD + VY
Sbjct: 79 PDTPLKLADFFKIAGVY 129
>gb|BE239974.1|BE239974 EST404023 MHRP- Medicago truncatula cDNA clone pMHRP-41I6, mRNA
sequence
Length = 543
Score = 148 bits (317), Expect = 2e-034
Identities = 55/94 (58%), Positives = 76/94 (80%)
Frame = -2 / +1
Query: 932 KNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGA 753
++F+EIVFQNN++ VQ+YH+DGY+F+VVGMD G+WT +SR YN D V+RCTTQV+P +
Sbjct: 1 RSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTSSRNGYNLRDAVARCTTQVYPYS 180
Query: 752 WTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 181 WTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRV 282
>gb|AL382871.1|AL382871 MtBC10D12F1 MtBC Medicago truncatula cDNA clone MtBC10D12 T3, mRNA
sequence
Length = 489
Score = 133 bits (284), Expect(2) = 4e-034
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = -2 / +2
Query: 824 ENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVD 645
ENSRGTYNKWDG++R T QV+PGAWTAV++SLD+ G WN+RTENLD+WYLGQETYIRVV+
Sbjct: 2 ENSRGTYNKWDGIARSTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVN 181
Query: 644 P 642
P
Sbjct: 182 P 184
Score = 34.1 bits (68), Expect(2) = 4e-034
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2 / +2
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQKPHGSRS 537
N TE+ PDN L CG L+ QK QK S S
Sbjct: 194 NKTELPMPDNALKCGRLQHLQKPQKIISSAS 286
>gb|AJ497188.1|AJ497188 AJ497188 MTFLOW Medicago truncatula cDNA clone mt--abc955106a01,
mRNA sequence
Length = 470
Score = 140 bits (300), Expect = 4e-032
Identities = 53/114 (46%), Positives = 81/114 (71%)
Frame = -2 / +2
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P G ++TSV+ + ++ F+E+VF+N + T+Q++HIDG++F+VVGMD G+W+ SR
Sbjct: 32 PDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASR 211
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
YN D ++R T QV+P +WTA+ + LD+ G WNVR+EN YLG + Y+RV
Sbjct: 212 LNYNLRDTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRV 373
>gb|AJ497191.1|AJ497191 AJ497191 MTFLOW Medicago truncatula cDNA clone mt--abc955106a04,
mRNA sequence
Length = 470
Score = 140 bits (300), Expect = 4e-032
Identities = 53/114 (46%), Positives = 81/114 (71%)
Frame = -2 / +2
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P G ++TSV+ + ++ F+E+VF+N + T+Q++HIDG++F+VVGMD G+W+ SR
Sbjct: 32 PDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASR 211
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
YN D ++R T QV+P +WTA+ + LD+ G WNVR+EN YLG + Y+RV
Sbjct: 212 LNYNLRDTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRV 373
>gb|AJ497314.1|AJ497314 AJ497314 MTFLOW Medicago truncatula cDNA clone mt--abc955107g01,
mRNA sequence
Length = 470
Score = 140 bits (300), Expect = 4e-032
Identities = 53/114 (46%), Positives = 81/114 (71%)
Frame = -2 / +2
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P G ++TSV+ + ++ F+E+VF+N + T+Q++HIDG++F+VVGMD G+W+ SR
Sbjct: 32 PDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASR 211
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
YN D ++R T QV+P +WTA+ + LD+ G WNVR+EN YLG + Y+RV
Sbjct: 212 LNYNLRDTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRV 373
>gb|CX541857.1|CX541857 s13dNF71F05GS047_467022 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 521
Score = 140 bits (300), Expect = 4e-032
Identities = 53/114 (46%), Positives = 81/114 (71%)
Frame = -2 / +2
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P G ++TSV+ + ++ F+E+VF+N + T+Q++HIDG++F+VVGMD G+W+ SR
Sbjct: 56 PDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASR 235
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
YN D ++R T QV+P +WTA+ + LD+ G WNVR+EN YLG + Y+RV
Sbjct: 236 LNYNLRDTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRV 397
>gb|CA922392.1|CA922392 EST640110 MTUS Medicago truncatula cDNA clone MTUS-53B5, mRNA
sequence
Length = 730
Score = 138 bits (295), Expect = 2e-031
Identities = 50/102 (49%), Positives = 77/102 (75%)
Frame = -2 / -2
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
TSV+ T +F EI+FQN+++T+Q++H+DG +F+VVG G+WT + R TYN DG++R
Sbjct: 630 TSVLGFTLHDFAEIIFQNDENTIQSWHMDGSSFYVVGFGKGKWTPDVRRTYNLVDGITRY 451
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
TTQV+P +WT +++SLD+ G WN+R+ + YLGQ+ Y+RV
Sbjct: 450 TTQVYPNSWTTILVSLDNKGMWNLRSAIWENRYLGQDLYMRV 325
>emb|CR500439.1| mth2-177B20RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 759
Score = 134 bits (287), Expect = 3e-030
Identities = 47/107 (43%), Positives = 74/107 (69%)
Frame = -2 / +3
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ +V+N T++ F+EI+F+N +Q+Y++DGY+F+ V ++ G+WT R YN D VS
Sbjct: 87 VEANVLNVTFRTFVEIIFENPTKVIQSYNLDGYSFFAVAVEPGKWTPEKRKNYNLLDAVS 266
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
R T QVFP +W A+ML+ D+ G WN+R+E + YLGQ+ Y+ V+ P
Sbjct: 267 RHTVQVFPKSWAAIMLTFDNAGMWNLRSEMAENRYLGQQMYMSVLSP 407
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
Length = 141672
Score = 134 bits (287), Expect = 3e-030
Identities = 47/107 (43%), Positives = 74/107 (69%)
Frame = -2 / +3
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ +V+N T++ F+EI+F+N +Q+Y++DGY+F+ V ++ G+WT R YN D VS
Sbjct: 25689 VEANVLNVTFRTFVEIIFENPTKVIQSYNLDGYSFFAVAVEPGKWTPEKRKNYNLLDAVS 25868
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
R T QVFP +W A+ML+ D+ G WN+R+E + YLGQ+ Y+ V+ P
Sbjct: 25869 RHTVQVFPKSWAAIMLTFDNAGMWNLRSEMAENRYLGQQMYMSVLSP 26009
Score = 86.3 bits (182), Expect(3) = 1e-026
Identities = 35/65 (53%), Positives = 42/65 (64%)
Frame = -2 / +2
Query: 836 GEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYI 657
G WT R TYN D VSR T QVFP +W A+MLS D+ G WN+R+E + YLGQ+ YI
Sbjct: 32177 GLWTPEKRKTYNLLDAVSRHTIQVFPKSWAAIMLSFDNVGVWNLRSEIAENRYLGQQLYI 32356
Query: 656 RVVDP 642
V P
Sbjct: 32357 SVPTP 32371
Score = 47.8 bits (98), Expect(3) = 1e-026
Identities = 15/35 (42%), Positives = 29/35 (82%)
Frame = -2 / +3
Query: 953 SVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVV 849
+V+ ++ F+EIVF+N++ +VQ+Y++DGY+F+ V
Sbjct: 31968 NVLKFKHRTFIEIVFENHEKSVQSYNLDGYSFFAV 32072
Score = 24.9 bits (48), Expect(3) = 1e-026
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 608 PDNMLYCGLLKDKQK 564
P+N L CG++KD K
Sbjct: 32402 PENSLLCGIVKDLPK 32446
>gb|AW687044.2|AW687044 NF005D03RT1F1028 Developing root Medicago truncatula cDNA clone
NF005D03RT 5', mRNA sequence
Length = 552
Score = 117 bits (250), Expect(3) = 4e-030
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = -2 / +1
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
TSV+ + ++ F+EIVFQN++S VQ++HIDGY+FWVVGMD G WT NSR YN D VSR
Sbjct: 265 TSVMGADFRAFVEIVFQNHESIVQSWHIDGYSFWVVGMDGGVWTPNSRNQYNLRDAVSRS 444
Query: 776 TTQVFPGAWTA 744
TTQV+P +WTA
Sbjct: 445 TTQVYPKSWTA 477
Score = 29.9 bits (59), Expect(3) = 4e-030
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 743 VMLSLDSPGFWNVRTENLDTWYLG 672
+ ++LD+ G WNVR+E YLG
Sbjct: 479 IYMALDNVGMWNVRSEFWARQYLG 550
Score = 24.0 bits (46), Expect(3) = 4e-030
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLY 1023
P DTPL+LAD +
Sbjct: 160 PADTPLKLADYF 195
>gb|CA922495.1|CA922495 EST640213 MTUS Medicago truncatula cDNA clone MTUS-54D10, mRNA
sequence
Length = 781
Score = 128 bits (275), Expect(2) = 6e-030
Identities = 45/93 (48%), Positives = 69/93 (74%)
Frame = -2 / -2
Query: 929 NFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAW 750
+F+E+VFQN+++T+Q++H+DGY FWVVG +G+WT R YN D +R T QV+P +W
Sbjct: 513 DFVELVFQNDENTMQSWHLDGYDFWVVGYGFGQWTPARRRIYNLVDAPTRHTAQVYPNSW 334
Query: 749 TAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
T +++SLD+ G WN+R+ + YLGQ+ Y+RV
Sbjct: 333 TTILVSLDNQGMWNLRSAIWERQYLGQQLYLRV 235
Score = 24.0 bits (46), Expect(2) = 6e-030
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2 / -1
Query: 1052 DTPLRLADLYDKKDVYTLD 996
+TPL+LAD ++ ++++D
Sbjct: 643 ETPLKLADYFNIPGIFSVD 587
>gb|BE239899.1|BE239899 EST403948 MHRP- Medicago truncatula cDNA clone pMHRP-38B10, mRNA
sequence
Length = 461
Score = 129 bits (276), Expect = 9e-029
Identities = 46/104 (44%), Positives = 74/104 (71%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ TSV+ ++ +F+E+VFQN+++T+Q++ +DGY FWVVG +G+WT R YN D +
Sbjct: 4 VATSVLPTSLHDFVELVFQNDENTMQSWRLDGYDFWVVGYGFGQWTPARRRIYNLVDAPT 183
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
R T QV+P +WT +++SLD+ G WN+ + + YLGQ+ Y+RV
Sbjct: 184 RHTAQVYPNSWTTILVSLDNQGMWNLMSAIWERQYLGQQLYLRV 315
>gb|BQ148049.1|BQ148049 NF058B06FL1F1057 Developing flower Medicago truncatula cDNA clone
NF058B06FL 5', mRNA sequence
Length = 675
Score = 124 bits (266), Expect(2) = 1e-028
Identities = 43/91 (47%), Positives = 67/91 (73%)
Frame = -2 / +3
Query: 974 GPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKW 795
GP + TSV+ ++ +F+E+VFQN+++T+Q++H+DGY FWVVG +G+WT R YN
Sbjct: 402 GPAYVATSVLPTSLHDFVELVFQNDENTMQSWHLDGYDFWVVGYGFGQWTPARRRIYNLV 581
Query: 794 DGVSRCTTQVFPGAWTAVMLSLDSPGFWNVR 702
D +R T QV+P +WT +++SLD+ G WN+R
Sbjct: 582 DAPTRHTAQVYPNSWTTILVSLDNQGMWNLR 674
Score = 24.0 bits (46), Expect(2) = 1e-028
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 1052 DTPLRLADLYDKKDVYTLD 996
+TPL+LAD ++ ++++D
Sbjct: 318 ETPLKLADYFNIPGIFSVD 374
>gb|CG925890.1|CG925890 MBEJS57TRB mth2 Medicago truncatula genomic clone 70J17, DNA
sequence
Length = 953
Score = 65.2 bits (136), Expect(4) = 1e-028
Identities = 23/40 (57%), Positives = 35/40 (87%)
Frame = -2 / +1
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDY 837
TSV+ + ++ F+EIVFQN++S VQ++HIDGY+FWVVG ++
Sbjct: 169 TSVMGADFRAFVEIVFQNHESIVQSWHIDGYSFWVVG*EF 288
Score = 58.3 bits (121), Expect(4) = 1e-028
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = -2 / +1
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPNG 636
QV+P +WTA+ ++LD+ G WNVR+E YLGQ+ Y+RV G
Sbjct: 655 QVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAG 789
Score = 42.3 bits (86), Expect(4) = 1e-028
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -2 / +1
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQV 765
MD G WT NSR YN D VSR TTQV
Sbjct: 478 MDGGVWTPNSRNQYNLRDAVSRSTTQV 558
Score = 24.0 bits (46), Expect(4) = 1e-028
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLY 1023
P DTPL+LAD +
Sbjct: 64 PADTPLKLADYF 99
>gb|BQ148467.1|BQ148467 NF068F08FL1F1075 Developing flower Medicago truncatula cDNA clone
NF068F08FL 5', mRNA sequence
Length = 635
Score = 110 bits (235), Expect(2) = 2e-027
Identities = 39/52 (75%), Positives = 48/52 (92%)
Frame = -2 / +1
Query: 797 WDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
WDG++R T QV+PGAWTAV++SLD+ G WN+RTENLD+WYLGQETYIRVV+P
Sbjct: 10 WDGIARSTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNP 165
Score = 34.1 bits (68), Expect(2) = 2e-027
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQKPHGSRS 537
N TE+ PDN L CG L+ QK QK S S
Sbjct: 175 NKTELPMPDNALKCGRLQHLQKPQKIISSAS 267
>gb|AL377148.1|AL377148 MtBB29F10F1 MtBB Medicago truncatula cDNA clone MtBB29F10 T3, mRNA
sequence
Length = 460
Score = 119 bits (254), Expect(2) = 2e-027
Identities = 43/84 (51%), Positives = 62/84 (73%)
Frame = -2 / +1
Query: 998 DFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTEN 819
D T P +GP I TSV+ ++ +F+E+VFQNN++T+Q++H+DGY FWVVG G+WT+
Sbjct: 208 DIQTTPSNGPAHIATSVLRTSLHDFIEVVFQNNENTMQSWHLDGYDFWVVGYGSGQWTDA 387
Query: 818 SRGTYNKWDGVSRCTTQVFPGAWT 747
SR TYN D ++R T QV+P +WT
Sbjct: 388 SRSTYNLVDALTRHTAQVYPNSWT 459
Score = 24.9 bits (48), Expect(2) = 2e-027
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYD 1020
PDTPL+LAD ++
Sbjct: 154 PDTPLKLADYFN 189
>gb|AW126197.2|AW126197 N100042e rootphos(-) Medicago truncatula cDNA clone MHRP-1D3, mRNA
sequence
Length = 522
Score = 114 bits (244), Expect(2) = 1e-026
Identities = 44/89 (49%), Positives = 63/89 (70%)
Frame = -2 / +2
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ + Y+ F+EIVFQN++ +Q+YH+DGY+F+VVG G+WT + R Y
Sbjct: 254 PSGGGIYLDTSVMQTDYRTFVEIVFQNDEDILQSYHLDGYSFFVVGWMGGQWTSDKRNQY 433
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPG 717
N D VSR TTQV+P +WTA+ + LD+ G
Sbjct: 434 NLRDAVSRSTTQVYPKSWTAIYVPLDNVG 520
Score = 27.2 bits (53), Expect(2) = 1e-026
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / +2
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTPL+LAD + VY
Sbjct: 179 PDTPLKLADFFKIAGVY 229
>gb|BG588241.1|BG588241 EST490050 MHRP- Medicago truncatula cDNA clone pMHRP-41D24, mRNA
sequence
Length = 428
Score = 119 bits (254), Expect = 9e-026
Identities = 44/104 (42%), Positives = 70/104 (67%)
Frame = -2 / +1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
+ TSV ++ +F+E+VFQN+++T+Q++ +DGY FWV G G+WT R YN D +
Sbjct: 4 VATSV*PTSLHDFVELVFQNDENTMQSWRLDGYDFWVEGYGLGQWTPARRRIYNLVDAPT 183
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
R T QV+P +WT +++SLD+ WN+ + + YLGQ+ Y+RV
Sbjct: 184 RHTAQVYPNSWTTILVSLDNQSMWNLMSAIWERQYLGQQLYLRV 315
>gb|AC151708.6| Medicago truncatula clone mth2-15h5, complete sequence
Length = 86100
Score = 66.1 bits (138), Expect(3) = 2e-025
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = -2 / +1
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
QV+P +WTA+ ++LD+ G WN+R+EN + YLGQ+ Y+RV P+
Sbjct: 74533 QVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPS 74664
Score = 62.0 bits (129), Expect(3) = 2e-025
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -2 / +2
Query: 1007 YTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDY 837
Y T P G ++T+V+ + + ++EIVFQN +++VQ++HIDGY+F+VVG Y
Sbjct: 73976 YVGGISTSPTGGNAYLQTAVMGANFHEYVEIVFQNWENSVQSWHIDGYSFFVVG*AY 74146
Score = 45.5 bits (93), Expect(3) = 2e-025
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2 / +2
Query: 836 GEWTENSRGTYNKWDGVSRCTTQV 765
G+WT NSRG YN D V+RCTTQV
Sbjct: 74375 GQWTPNSRGRYNLRDTVARCTTQV 74446
>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence
Length = 122876
Score = 66.1 bits (138), Expect(3) = 4e-025
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = -2 / +1
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
QV+P +WTA+ ++LD+ G WN+R+EN + YLGQ+ Y+RV P+
Sbjct: 63214 QVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPS 63345
Score = 62.0 bits (129), Expect(3) = 4e-025
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -2 / +2
Query: 1007 YTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDY 837
Y T P G ++T+V+ + + ++EIVFQN +++VQ++HIDGY+F+VVG Y
Sbjct: 62657 YVGGISTSPTGGNAYLQTAVMGANFHEYVEIVFQNWENSVQSWHIDGYSFFVVG*AY 62827
Score = 45.5 bits (93), Expect(3) = 4e-025
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2 / +2
Query: 836 GEWTENSRGTYNKWDGVSRCTTQV 765
G+WT NSRG YN D V+RCTTQV
Sbjct: 63056 GQWTPNSRGRYNLRDTVARCTTQV 63127
>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence
Length = 133030
Score = 66.1 bits (138), Expect(3) = 4e-025
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = -2 / -2
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPN 639
QV+P +WTA+ ++LD+ G WN+R+EN + YLGQ+ Y+RV P+
Sbjct: 58491 QVYPRSWTAIYMALDNVGMWNIRSENWERQYLGQQFYLRVYTPS 58360
Score = 62.0 bits (129), Expect(3) = 4e-025
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -2 / -3
Query: 1007 YTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDY 837
Y T P G ++T+V+ + + ++EIVFQN +++VQ++HIDGY+F+VVG Y
Sbjct: 59048 YVGGISTSPTGGNAYLQTAVMGANFHEYVEIVFQNWENSVQSWHIDGYSFFVVG*AY 58878
Score = 45.5 bits (93), Expect(3) = 4e-025
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 836 GEWTENSRGTYNKWDGVSRCTTQV 765
G+WT NSRG YN D V+RCTTQV
Sbjct: 58649 GQWTPNSRGRYNLRDTVARCTTQV 58578
>gb|BQ147584.1|BQ147584 NF044D11FL1F1093 Developing flower Medicago truncatula cDNA clone
NF044D11FL 5', mRNA sequence
Length = 622
Score = 86.3 bits (182), Expect(3) = 4e-023
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = -2 / +1
Query: 1007 YTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEW 828
Y T P G ++T+V+ + + ++EIVFQN +++VQ++HIDGY+F+VV G W
Sbjct: 307 YVGGISTSPTGGNAYLQTAVMGANFHEYVEIVFQNWENSVQSWHIDGYSFFVVXFGSGXW 486
Query: 827 TENSRGTYNKWDGVSRCTT 771
T NS G YN D + CTT
Sbjct: 487 TPNSXGRYNLRDTXAXCTT 543
Score = 35.4 bits (71), Expect(3) = 4e-023
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2 / +2
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTEN 693
V P WTA+ ++LD+ G N+R EN
Sbjct: 548 VXPRXWTAIYMALDNVGMXNIRXEN 622
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTPL+LAD ++ V+
Sbjct: 256 PDTPLKLADYFNIPGVF 306
>gb|AC157488.1| Medicago truncatula chromosome 2 BAC clone mte1-33n12, complete
sequence
Length = 93219
Score = 62.9 bits (131), Expect(4) = 2e-022
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -2 / -1
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
TT V+P +W+AV + LD+ G WNVR+EN YLGQ+ Y+RV P
Sbjct: 38268 TT*VYPKSWSAVYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSP 38134
Score = 57.4 bits (119), Expect(4) = 2e-022
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = -2 / -3
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVG 846
P P G ++TSV+ + ++ ++EIVF+N + +VQ++HIDG+ F+VVG
Sbjct: 38830 PDNPTGGGGYLQTSVMAADFRGYVEIVFENPEDSVQSWHIDGHHFFVVG 38684
Score = 40.5 bits (82), Expect(4) = 2e-022
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2 / -3
Query: 845 MDYGEWTENSRGTYNKWDGVSRCTTQV 765
MD G+W+ SR YN D +SRCT QV
Sbjct: 38446 MDGGQWSAASRSNYNLGDTISRCTVQV 38366
Score = 27.2 bits (53), Expect(4) = 2e-022
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 1058 PPDTPLRLADLYDKKDVYTL 999
P DTPL+LAD + V++L
Sbjct: 38899 PADTPLKLADYFKISGVFSL 38840
>gb|BG453833.1|BG453833 NF095C05LF1F1035 Developing leaf Medicago truncatula cDNA clone
NF095C05LF 5', mRNA sequence
Length = 586
Score = 98.7 bits (209), Expect(2) = 7e-022
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ + Y+ F+EIVFQN++ +Q+YH+DGY+F+VVGMD G+WT + R Y
Sbjct: 370 PSGGGIYLDTSVMQTDYRTFVEIVFQNDEDILQSYHLDGYSFFVVGMDGGQWTSDKRNQY 549
Query: 803 NKWDGVSRCTTQ 768
N D VSR TTQ
Sbjct: 550 NLRDAVSRSTTQ 585
Score = 27.2 bits (53), Expect(2) = 7e-022
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTPL+LAD + VY
Sbjct: 295 PDTPLKLADFFKIAGVY 345
>emb|CR509524.1| mth4-20B22FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 382
Score = 89.0 bits (188), Expect(2) = 7e-022
Identities = 33/52 (63%), Positives = 44/52 (84%)
Frame = -2 / +3
Query: 1001 LDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVG 846
LDFP+ P++ PVI S+IN+TYK F+EIV QNNDS+VQ +H+DGY+F+VVG
Sbjct: 3 LDFPSKPMNRTPVIDRSIINATYKGFIEIVLQNNDSSVQNFHLDGYSFFVVG 158
Score = 36.8 bits (74), Expect(2) = 7e-022
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3 / +3
Query: 844 WTMVSGLRIAVGLTTSGMVFLVARLRC 764
WTMV G +I LT GM +L A+LRC
Sbjct: 249 WTMVIGPKIQETLTIGGMQYLAAQLRC 329
>gb|CG938179.1|CG938179 MBEGR39TF mth2 Medicago truncatula genomic clone 52G6, DNA sequence
Length = 889
Score = 55.6 bits (115), Expect(3) = 8e-022
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = -2 / +3
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMD 840
TSV+ T +F EI+FQN+++T+Q++H+DG +F+VVG D
Sbjct: 90 TSVLGFTLHDFAEIIFQNDENTIQSWHMDGSSFYVVG*D 206
Score = 55.1 bits (114), Expect(3) = 8e-022
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = -2 / +2
Query: 767 VFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
V+P +WT +++SLD+ G WN+R+ + YLGQ+ Y+RV
Sbjct: 572 VYPNSWTTILVSLDNKGMWNLRSAIWENRYLGQDLYMRV 688
Score = 37.3 bits (75), Expect(3) = 8e-022
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 836 GEWTENSRGTYNKWDGVSRCTTQV 765
G+WT + R TYN DG++R TTQV
Sbjct: 311 GKWTPDVRRTYNLVDGITRYTTQV 382
>gb|CG956780.1|CG956780 MBEDR60TRC mth2 Medicago truncatula genomic clone 34I24, DNA
sequence
Length = 854
Score = 88.1 bits (186), Expect(2) = 4e-021
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = -2 / +2
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
QVFPG WTA+++SLD+ G WN+R ENLD WYLGQETY+R+V+P
Sbjct: 203 QVFPGGWTAILVSLDNVGSWNLRAENLDRWYLGQETYLRIVNP 331
Score = 35.0 bits (70), Expect(2) = 4e-021
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +2
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TE AP+N+LYCG LK KQK
Sbjct: 347 TETGAPENVLYCGPLKYKQK 406
>emb|CR487088.1| mth2-139D4FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 847
Score = 88.1 bits (186), Expect(2) = 4e-021
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = -2 / -3
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
QVFPG WTA+++SLD+ G WN+R ENLD WYLGQETY+R+V+P
Sbjct: 413 QVFPGGWTAILVSLDNVGSWNLRAENLDRWYLGQETYLRIVNP 285
Score = 35.0 bits (70), Expect(2) = 4e-021
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TE AP+N+LYCG LK KQK
Sbjct: 269 TETGAPENVLYCGPLKYKQK 210
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,152,228,543
Number of Sequences: 392609
Number of extensions: 17706790
Number of successful extensions: 72328
Number of sequences better than 1.0e-020: 49
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 37443949128
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)