TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192909.2.3
(674 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL388307.1|AL388307 MtBC47G10R1 MtBC Medicago truncatula... 173 2e-042
gb|DW018181.1|DW018181 EST1227142 MTY Medicago truncatula c... 173 2e-042
gb|BG452622.1|BG452622 NF078B09LF1F1074 Developing leaf Med... 172 5e-042
gb|BE941249.1|BE941249 EST420828 MGHG Medicago truncatula c... 165 9e-040
gb|AL388306.1|AL388306 MtBC47G10F1 MtBC Medicago truncatula... 164 2e-039
gb|AC119415.13| Medicago truncatula clone mth2-27n2, comple... 160 2e-038
gb|CA922148.1|CA922148 EST639866 MTUS Medicago truncatula c... 149 4e-035
gb|CA922149.1|CA922149 EST639867 MTUS Medicago truncatula c... 149 4e-035
gb|CA921737.1|CA921737 EST639455 MTUS Medicago truncatula c... 149 4e-035
gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone m... 148 8e-035
gb|BF632019.1|BF632019 NF040A01DT1F1002 Drought Medicago tr... 148 1e-034
gb|BG648558.1|BG648558 EST510177 HOGA Medicago truncatula c... 148 1e-034
gb|AW774212.1|AW774212 EST333363 KV3 Medicago truncatula cD... 147 1e-034
gb|CA918709.1|CA918709 EST636427 MTUS Medicago truncatula c... 147 1e-034
gb|BI311272.1|BI311272 EST5313022 GESD Medicago truncatula ... 143 3e-033
gb|BG646036.1|BG646036 EST507655 KV3 Medicago truncatula cD... 138 9e-032
gb|AL387466.1|AL387466 MtBC42G12F1 MtBC Medicago truncatula... 127 2e-028
gb|AL375694.1|AL375694 MtBB16D07R1 MtBB Medicago truncatula... 125 9e-028
gb|CX525211.1|CX525211 s13dNF20G04AT036_479056 Aphid-Infect... 124 1e-027
gb|AC140067.11| Medicago truncatula clone mth2-25n14, compl... 116 5e-025
gb|AC141865.25| Medicago truncatula clone mth2-7b19, comple... 116 5e-025
gb|AC148471.11| Medicago truncatula clone mth2-47i14, WORKI... 116 5e-025
gb|AC145512.25| Medicago truncatula clone mth2-19o18, WORKI... 116 5e-025
gb|AL387467.1|AL387467 MtBC42G12R1 MtBC Medicago truncatula... 115 9e-025
>gb|AL388307.1|AL388307 MtBC47G10R1 MtBC Medicago truncatula cDNA clone MtBC47G10 T7, mRNA
sequence
Length = 549
Score = 173 bits (373), Expect = 2e-042
Identities = 65/107 (60%), Positives = 80/107 (74%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DA+ MKWI HDWSD HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+
Sbjct: 19 PKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHI 198
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
D IMLAHNPGGKER ++EF +LAKGAGF GFK N + +EF+K
Sbjct: 199 DAIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 339
>gb|DW018181.1|DW018181 EST1227142 MTY Medicago truncatula cDNA clone MTYB330, mRNA
sequence
Length = 825
Score = 173 bits (373), Expect = 2e-042
Identities = 65/107 (60%), Positives = 80/107 (74%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DA+ MKWI HDWSD HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+
Sbjct: 304 PKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHI 483
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
D IMLAHNPGGKER ++EF +LAKGAGF GFK N + +EF+K
Sbjct: 484 DAIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 624
>gb|BG452622.1|BG452622 NF078B09LF1F1074 Developing leaf Medicago truncatula cDNA clone
NF078B09LF 5', mRNA sequence
Length = 667
Score = 172 bits (370), Expect = 5e-042
Identities = 65/107 (60%), Positives = 79/107 (73%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DA+ MKWI HDWSD HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+
Sbjct: 573 PKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHI 394
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
D IMLAHNPGGKER ++EF +LAKGAGF GFK N + +EF K
Sbjct: 393 DAIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFXK 253
>gb|BE941249.1|BE941249 EST420828 MGHG Medicago truncatula cDNA clone pMGHG-3I22, mRNA
sequence
Length = 482
Score = 165 bits (354), Expect = 9e-040
Identities = 62/100 (62%), Positives = 76/100 (76%)
Frame = -1 / -1
Query: 653 MKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAH 474
MKWI HDWSD HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+D IMLAH
Sbjct: 482 MKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDAIMLAH 303
Query: 473 NPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
NPGGKER ++EF +LAKGAGF GFK N + +EF+K
Sbjct: 302 NPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 183
>gb|AL388306.1|AL388306 MtBC47G10F1 MtBC Medicago truncatula cDNA clone MtBC47G10 T3, mRNA
sequence
Length = 459
Score = 164 bits (352), Expect = 2e-039
Identities = 60/92 (65%), Positives = 72/92 (78%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DA+ MKWI HDWSD HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+
Sbjct: 165 PKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHI 344
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFK 399
D IM AHNPGGKER ++EF +LAKGAGF GFK
Sbjct: 345 DAIMSAHNPGGKERTQKEFEDLAKGAGFQGFK 440
>gb|AC119415.13| Medicago truncatula clone mth2-27n2, complete sequence
Length = 139330
Score = 160 bits (344), Expect = 2e-038
Identities = 60/98 (61%), Positives = 74/98 (75%)
Frame = -1 / -3
Query: 647 WILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNP 468
WI HDWSD HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+D IMLAHNP
Sbjct: 7193 WICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDAIMLAHNP 7014
Query: 467 GGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
GGKER ++EF +LAKGAGF GFK N + +EF+K
Sbjct: 7013 GGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 6900
>gb|CA922148.1|CA922148 EST639866 MTUS Medicago truncatula cDNA clone MTUS-49H9, mRNA
sequence
Length = 829
Score = 149 bits (320), Expect = 4e-035
Identities = 56/107 (52%), Positives = 73/107 (68%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DAI MKWI HDW+D C LKNCYD+LP GKVI VEC++P+ ++ ++ VF +
Sbjct: 490 PKADAIFMKWICHDWNDEQCLKFLKNCYDSLPATGKVIAVECIIPIIPDSNLASKSVFQM 311
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
D I+L H+ GGKER E+EF LAKGAGF GF+ N + +EF+K
Sbjct: 310 DAIILCHSSGGKERTEKEFEALAKGAGFEGFQIACCAFNMYVMEFLK 170
>gb|CA922149.1|CA922149 EST639867 MTUS Medicago truncatula cDNA clone MTUS-49H10, mRNA
sequence
Length = 803
Score = 149 bits (320), Expect = 4e-035
Identities = 56/107 (52%), Positives = 73/107 (68%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DAI MKWI HDW+D C LKNCYD+LP GKVI VEC++P+ ++ ++ VF +
Sbjct: 491 PKADAIFMKWICHDWNDEQCLKFLKNCYDSLPATGKVIAVECIIPIIPDSNLASKSVFQM 312
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
D I+L H+ GGKER E+EF LAKGAGF GF+ N + +EF+K
Sbjct: 311 DAIILCHSSGGKERTEKEFEALAKGAGFEGFQIACCAFNMYVMEFLK 171
>gb|CA921737.1|CA921737 EST639455 MTUS Medicago truncatula cDNA clone MTUS-43H1, mRNA
sequence
Length = 750
Score = 149 bits (320), Expect = 4e-035
Identities = 56/107 (52%), Positives = 73/107 (68%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DAI MKWI HDW+D C LKNCYD+LP GKVI VEC++P+ ++ ++ VF +
Sbjct: 509 PKADAIFMKWICHDWNDEQCLKFLKNCYDSLPATGKVIAVECIIPIIPDSNLASKSVFQM 330
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
D I+L H+ GGKER E+EF LAKGAGF GF+ N + +EF+K
Sbjct: 329 DAIILCHSSGGKERTEKEFEALAKGAGFEGFQIACCAFNMYVMEFLK 189
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete
sequence
Length = 132097
Score = 148 bits (318), Expect = 8e-035
Identities = 58/104 (55%), Positives = 72/104 (69%)
Frame = -1 / -1
Query: 659 ILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIML 480
I +WILHDWSD HC LLKNCY A+PE+GKVIVV+ +LPV E T A+ D++M+
Sbjct: 77587 IFFQWILHDWSDEHCLKLLKNCYKAIPEDGKVIVVDTILPVMPETTANAKTACMSDVLMM 77408
Query: 479 AHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
NPGGKER E EF+ELAKG+GFS K + W +EF K*+
Sbjct: 77407 TQNPGGKERTEHEFKELAKGSGFSAIKPICCVSGLWVMEFFK*L 77276
Score = 135 bits (289), Expect = 8e-031
Identities = 54/106 (50%), Positives = 70/106 (66%)
Frame = -1 / -2
Query: 653 MKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAH 474
++WILHDWSD C LLKNCYDA+P++GKVIV+E VL + E + D++M+
Sbjct: 86049 VQWILHDWSDEQCLKLLKNCYDAIPDDGKVIVLEAVLSIIPENNAAWKFAAQSDVLMMTQ 85870
Query: 473 NPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPP 336
+PGGKER E+EF +LA GAGFSG + W +EF K*I PP
Sbjct: 85869 SPGGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK*ISYPP 85732
>gb|BF632019.1|BF632019 NF040A01DT1F1002 Drought Medicago truncatula cDNA clone NF040A01DT
5', mRNA sequence
Length = 650
Score = 148 bits (317), Expect = 1e-034
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DA+ MKWI HDWSD HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+
Sbjct: 335 PKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHI 514
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKAT 393
D IMLAHNPGGKER ++EF +LA+ F+++
Sbjct: 515 DAIMLAHNPGGKERTQKEFEDLAQECWIPRFQSS 616
>gb|BG648558.1|BG648558 EST510177 HOGA Medicago truncatula cDNA clone pHOGA-23I21 5' end,
mRNA sequence
Length = 645
Score = 148 bits (317), Expect = 1e-034
Identities = 60/113 (53%), Positives = 74/113 (65%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DAI MKWILHDWSD C LLKNCYDA+P++GKVIV+E VL + E +
Sbjct: 152 PKADAIFMKWILHDWSDEQCLKLLKNCYDAIPDDGKVIVLEAVLSIIPENNAAWKFAAQS 331
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPP 336
D++M+ +PGGKER E+EF +LA GAGFSG + W +EF K*I PP
Sbjct: 332 DVLMMTQSPGGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK*ISYPP 490
>gb|AW774212.1|AW774212 EST333363 KV3 Medicago truncatula cDNA clone pKV3-21N16, mRNA
sequence
Length = 625
Score = 147 bits (316), Expect = 1e-034
Identities = 55/107 (51%), Positives = 73/107 (68%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DAI +KWI HDW+D C LKNCYD+LP GKVI VEC++P+ ++ ++ VF +
Sbjct: 580 PKADAIFIKWICHDWNDEQCLKFLKNCYDSLPATGKVIAVECIIPIIPDSNLASKSVFQM 401
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
D I+L H+ GGKER E+EF LAKGAGF GF+ N + +EF+K
Sbjct: 400 DAIILCHSSGGKERTEKEFEALAKGAGFEGFQIACCAFNMYVMEFLK 260
>gb|CA918709.1|CA918709 EST636427 MTUS Medicago truncatula cDNA clone MTUS-2B10, mRNA
sequence
Length = 536
Score = 147 bits (316), Expect = 1e-034
Identities = 60/113 (53%), Positives = 74/113 (65%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DAI MKWILHDWSD C LLKNCYDA+P++GKVIV+E VL + E +
Sbjct: 364 PKADAIFMKWILHDWSDEQCLKLLKNCYDAIPDDGKVIVLETVLSIIPENNAAWKFAAQS 185
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPP 336
D++M+ +PGGKER E+EF +LA GAGFSG + W +EF K*I PP
Sbjct: 184 DVLMMTQSPGGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK*ISYPP 26
>gb|BI311272.1|BI311272 EST5313022 GESD Medicago truncatula cDNA clone pGESD10K24 5' end,
mRNA sequence
Length = 805
Score = 143 bits (307), Expect = 3e-033
Identities = 55/108 (50%), Positives = 74/108 (68%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWILHDWSD HC +LKNCYDA+P +GKVIV+E +P+ E + ++ +
Sbjct: 368 PKGDAILMKWILHDWSDEHCLKILKNCYDAIPNDGKVIVLEAHIPIVPENSYASKSTSQL 547
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK* 351
D++M+ +PGGKER ++EF +LA GF G + N W +EF K*
Sbjct: 548 DVLMMTQSPGGKERTKQEFIDLATRVGFIGIRCECCVRNFWVMEFFK* 691
>gb|BG646036.1|BG646036 EST507655 KV3 Medicago truncatula cDNA clone pKV3-48E4 5' end, mRNA
sequence
Length = 636
Score = 138 bits (296), Expect = 9e-032
Identities = 53/89 (59%), Positives = 67/89 (75%)
Frame = -1 / +1
Query: 620 HCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYERE 441
HC LKNCY+ALP+NGKVIV EC+LPV +++ +GV H+D IMLAHNPGGKER ++E
Sbjct: 22 HCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDAIMLAHNPGGKERTQKE 201
Query: 440 FRELAKGAGFSGFKATYIYANAWAIEFIK 354
F +LAKGAGF GFK N + +EF+K
Sbjct: 202 FEDLAKGAGFQGFKVHCNAFNTYIMEFLK 288
>gb|AL387466.1|AL387466 MtBC42G12F1 MtBC Medicago truncatula cDNA clone MtBC42G12 T3, mRNA
sequence
Length = 292
Score = 127 bits (271), Expect = 2e-028
Identities = 47/86 (54%), Positives = 60/86 (69%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P DAI MKWI HDW+D C LKNCYD+LP GKVI VEC++P+ ++ ++ VF +
Sbjct: 34 PKADAIFMKWICHDWNDEQCLKFLKNCYDSLPATGKVIAVECIIPIIPDSNLASKSVFQM 213
Query: 494 DMIMLAHNPGGKERYEREFRELAKGA 417
D I+L H+ GKER E+EF LAKGA
Sbjct: 214 DAIILCHSSSGKERTEKEFEALAKGA 291
>gb|AL375694.1|AL375694 MtBB16D07R1 MtBB Medicago truncatula cDNA clone MtBB16D07 T7, mRNA
sequence
Length = 461
Score = 125 bits (267), Expect = 9e-028
Identities = 47/100 (47%), Positives = 65/100 (65%)
Frame = -1 / +3
Query: 653 MKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAH 474
MKWI HDW+D C LKNCYD+LP GKVI VEC++P+ ++ + VF +D I+L H
Sbjct: 3 MKWICHDWNDEQCLQFLKNCYDSLPATGKVIAVECIIPIIPDSNLASISVFQMDAIILCH 182
Query: 473 NPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 354
+ GG E + ++F AKGAGF GF+ N + +EF+K
Sbjct: 183 SSGG*ESFSKKFEAGAKGAGFVGFQIACCAFNMYVMEFLK 302
>gb|CX525211.1|CX525211 s13dNF20G04AT036_479056 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 474
Score = 124 bits (266), Expect = 1e-027
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = -1 / -2
Query: 596 CYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGA 417
CY+ALP+NGKVIV EC+LPV +++ +GV H+D IMLAHNPGGKER ++EF +LAKGA
Sbjct: 473 CYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDAIMLAHNPGGKERTQKEFEDLAKGA 294
Query: 416 GFSGFKATYIYANAWAIEFIK 354
GF GFK N + +EF+K
Sbjct: 293 GFQGFKVHCNAFNTYIMEFLK 231
>gb|AC140067.11| Medicago truncatula clone mth2-25n14, complete sequence
Length = 116196
Score = 116 bits (247), Expect = 5e-025
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = -1 / -2
Query: 647 WILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNP 468
WILHDWS +C L+KNCYDA+P++GKVIV+E +LP + + + +D++M+ H
Sbjct: 41714 WILHDWSQENCMKLMKNCYDAIPDDGKVIVLEALLPNMPKNEVAWKSLSQMDILMMTHCS 41535
Query: 467 GGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
GKER ++EF ++A AGF G K N W +EF K*I
Sbjct: 41534 EGKERTKQEFMDMATNAGFRGIKYECCIYNFWIMEFFK*I 41415
>gb|AC141865.25| Medicago truncatula clone mth2-7b19, complete sequence
Length = 117380
Score = 116 bits (247), Expect = 5e-025
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = -1 / -3
Query: 647 WILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNP 468
WILHDWS +C L+KNCYDA+P++GKVIV+E +LP + + + +D++M+ H
Sbjct: 41718 WILHDWSQENCMKLMKNCYDAIPDDGKVIVLEALLPNMPKNEVAWKSLSQMDILMMTHCS 41539
Query: 467 GGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
GKER ++EF ++A AGF G K N W +EF K*I
Sbjct: 41538 EGKERTKQEFMDMATNAGFRGIKYECCIYNFWIMEFFK*I 41419
>gb|AC148471.11| Medicago truncatula clone mth2-47i14, WORKING DRAFT SEQUENCE, 39
unordered pieces
Length = 126497
Score = 116 bits (247), Expect = 5e-025
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = -1 / +1
Query: 647 WILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNP 468
WILHDWS +C L+KNCYDA+P++GKVIV+E +LP + + + +D++M+ H
Sbjct: 10111 WILHDWSQENCMKLMKNCYDAIPDDGKVIVLEALLPNMPKNEVAWKSLSQMDILMMTHCS 10290
Query: 467 GGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
GKER ++EF ++A AGF G K N W +EF K*I
Sbjct: 10291 EGKERTKQEFMDMATNAGFRGIKYECCIYNFWIMEFFK*I 10410
>gb|AC145512.25| Medicago truncatula clone mth2-19o18, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 129277
Score = 116 bits (247), Expect = 5e-025
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = -1 / +2
Query: 647 WILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNP 468
WILHDWS +C L+KNCYDA+P++GKVIV+E +LP + + + +D++M+ H
Sbjct: 79679 WILHDWSQENCMKLMKNCYDAIPDDGKVIVLEALLPNMPKNEVAWKSLSQMDILMMTHCS 79858
Query: 467 GGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
GKER ++EF ++A AGF G K N W +EF K*I
Sbjct: 79859 EGKERTKQEFMDMATNAGFRGIKYECCIYNFWIMEFFK*I 79978
>gb|AL387467.1|AL387467 MtBC42G12R1 MtBC Medicago truncatula cDNA clone MtBC42G12 T7, mRNA
sequence
Length = 550
Score = 115 bits (245), Expect = 9e-025
Identities = 44/88 (50%), Positives = 60/88 (68%)
Frame = -1 / +3
Query: 617 CATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREF 438
C LKNCYD+LP GKVI VEC++P+ ++ ++ VF +D I+L H+ GGKER E+EF
Sbjct: 6 CLKFLKNCYDSLPATGKVIAVECIIPIIPDSNLASKSVFQMDAIILCHSSGGKERTEKEF 185
Query: 437 RELAKGAGFSGFKATYIYANAWAIEFIK 354
LAKGAGF GF+ N + +EF+K
Sbjct: 186 EALAKGAGFEGFQIACCAFNMYVMEFLK 269
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 486,567,612
Number of Sequences: 392609
Number of extensions: 5797788
Number of successful extensions: 37365
Number of sequences better than 1.0e-020: 29
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21427385650
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)