TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2169937.2.1
(891 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC146562.17| Medicago truncatula clone mth2-14d10, compl... 163 2e-042
gb|BE239884.1|BE239884 EST403933 MHRP- Medicago truncatula ... 162 3e-040
gb|DW015065.1|DW015065 EST1224026 MTY Medicago truncatula c... 156 7e-040
gb|CA921296.1|CA921296 EST639014 MTUS Medicago truncatula c... 162 8e-039
gb|AJ845937.1|AJ845937 AJ845937 MtSNF Medicago truncatula c... 161 1e-038
gb|CG952481.1|CG952481 MBENF42TR mth2 Medicago truncatula g... 154 6e-038
gb|BE239936.1|BE239936 EST403985 MHRP- Medicago truncatula ... 153 1e-037
gb|AC144539.7| Medicago truncatula clone mth2-11o10, comple... 118 5e-035
gb|AC149491.2| Medicago truncatula chromosome 2 BAC clone m... 118 5e-035
gb|AJ845852.1|AJ845852 AJ845852 MtSNF Medicago truncatula c... 117 6e-035
gb|BG588681.1|BG588681 EST490490 MHRP- Medicago truncatula ... 117 3e-034
gb|BF644711.1|BF644711 NF019E05EC1F1038 Elicited cell cultu... 117 3e-034
gb|BQ156922.1|BQ156922 NF098G01IR1F1008 Irradiated Medicago... 115 3e-034
gb|CX526663.1|CX526663 s13dNF25C10AT082_513838 Aphid-Infect... 117 5e-034
gb|BE942469.1|BE942469 EST422048 MGHG Medicago truncatula c... 117 6e-033
gb|BQ153601.1|BQ153601 NF040D11IR1F1093 Irradiated Medicago... 111 1e-031
gb|BQ154587.1|BQ154587 NF077H06IR1F1060 Irradiated Medicago... 117 7e-031
gb|BG457631.1|BG457631 NF105D01PL1F1012 Phosphate starved l... 118 1e-030
gb|AW689225.1|AW689225 NF016H03ST1F1000 Developing stem Med... 118 6e-029
gb|AJ497453.1|AJ497453 AJ497453 MTFLOW Medicago truncatula ... 127 2e-028
gb|AJ548101.1|AJ548101 AJ548101 MTAPHEU Medicago truncatula... 111 4e-027
gb|AJ497126.1|AJ497126 AJ497126 MTFLOW Medicago truncatula ... 111 5e-027
gb|CX528751.1|CX528751 s13dNF07E03MJ019_243571 Methyl Jasmo... 107 2e-026
gb|AL378824.1|AL378824 MtBB40F11R1 MtBB Medicago truncatula... 118 1e-025
gb|BQ152567.1|BQ152567 NF021A06IR1F1049 Irradiated Medicago... 97 4e-025
gb|BQ156366.1|BQ156366 NF092A12IR1F1097 Irradiated Medicago... 94 4e-025
gb|AJ497244.1|AJ497244 AJ497244 MTFLOW Medicago truncatula ... 113 5e-024
emb|CR936328.1| Medicago truncatula chromosome 5 clone mth4... 66 1e-023
gb|AC137995.31| Medicago truncatula clone mth2-11j1, comple... 66 1e-023
gb|BF520734.1|BF520734 EST458207 DSIL Medicago truncatula c... 66 1e-023
emb|CR494458.1| mth2-168I11FM1 BAC end, cultivar Jemalong A... 59 8e-023
emb|CR482269.1| mth2-146C21FM1 BAC end, cultivar Jemalong A... 59 8e-023
gb|CA921855.1|CA921855 EST639573 MTUS Medicago truncatula c... 67 2e-021
gb|CB065517.1|CB065517 EST645198 HOGA Medicago truncatula c... 104 2e-021
gb|AC135318.40| Medicago truncatula clone mth2-36o3, WORKIN... 65 4e-021
gb|AC149129.3| Medicago truncatula chromosome 7 BAC clone m... 65 4e-021
>gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete sequence
Length = 118505
Score = 163 bits (351), Expect(2) = 2e-042
Identities = 68/115 (59%), Positives = 83/115 (72%)
Frame = +2 / +3
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK GA V++VVSE GWPSAGG AS DNA Y +
Sbjct: 6144 QQGNNQVGYRNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAGGDSASTDNAATYYRN 6323
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN* 703
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF N+ P Y I FN*
Sbjct: 6324 LINHVRNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPNRTPKYQISFN* 6488
Score = 162 bits (348), Expect(2) = 3e-040
Identities = 67/116 (57%), Positives = 83/116 (71%)
Frame = +2 / +1
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK GA V++VVSE GWPSA G AS DNA Y +
Sbjct: 1480 QQGNNAVGYQNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAAGDSASTDNAATYYRN 1659
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*L 706
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF +K P Y I FN*+
Sbjct: 1660 LINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSPKYQISFN*I 1827
Score = 156 bits (335), Expect(2) = 7e-040
Identities = 65/116 (56%), Positives = 81/116 (69%)
Frame = +2 / +3
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK G +V++VVSE GWPS GG AS DNA Y Q
Sbjct: 16656 QQGNNDVGYQNLFDAQLDSVYAALEKVGGTDVKIVVSESGWPSDGGDSASTDNASTYYQN 16835
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*L 706
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF +K Y FN*+
Sbjct: 16836 LINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSSKYQTSFN*I 17003
Score = 110 bits (235), Expect(3) = 3e-036
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = +2 / +2
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + YNN+FDAM+D+V AALEK G NV++VVSE GWPS GG AS+DNA Y
Sbjct: 26930 QQGNNEVGYNNIFDAMLDSVYAALEKVGGSNVKIVVSESGWPSKGGDSASIDNAATYYSN 27109
Query: 539 LIDHVGRGTPKRTG 580
LI+H+ GTPKR G
Sbjct: 27110 LINHIKNGTPKRPG 27151
Score = 95.5 bits (202), Expect(3) = 2e-030
Identities = 40/75 (53%), Positives = 51/75 (68%)
Frame = +2 / +2
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
TT++ + Y NLFDA + A+ AALEK G N+ VVVSE GWPS GG AS++NA+ Y
Sbjct: 64235 TTIKVHDGQYAYQNLFDATLGALYAALEKIGGANLEVVVSESGWPSDGGVAASIENAQIY 64414
Query: 530 NQGLIDHVGRGTPKR 574
++ LI HV GTP R
Sbjct: 64415 HENLIKHVITGTPNR 64459
Score = 92.3 bits (195), Expect(3) = 2e-028
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +2 / -1
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK G +V++VVSE GWPSAGG A+++NAR Y
Sbjct: 29063 QQGNNAVGYQNLFDAQLDSVYAALEKVGGSSVKIVVSESGWPSAGGDVATIENARTYYSN 28884
Query: 539 LIDHVGRG 562
LI+H G
Sbjct: 28883 LINHANSG 28860
Score = 52.8 bits (109), Expect(3) = 2e-030
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 584 LETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
LET++FAMF+EN KG D TE+++GLF +KQ Y I
Sbjct: 64472 LETYLFAMFDENNKGPDETERHYGLFTPDKQIKYQI 64579
Score = 51.5 bits (106), Expect(3) = 3e-036
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 584 LETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
+ET++FAMF+ENQK G TE+++GLF +K P Y +
Sbjct: 27158 IETYLFAMFDENQKTGATTEQHYGLFNPDKSPKYHV 27265
Score = 46.0 bits (94), Expect(3) = 2e-028
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +2 / -1
Query: 584 LETFVFAMFNENQKGGDPTEKNFGLF 661
+ET++FAMF+ENQK G TE++FGLF
Sbjct: 28829 IETYLFAMFDENQKPGAATEQHFGLF 28752
Score = 30.4 bits (60), Expect(2) = 2e-042
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYFAY +N + IS
Sbjct: 6075 NVYPYFAYINNKQSIS 6122
Score = 29.5 bits (58), Expect(3) = 3e-036
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYFAY N + IS
Sbjct: 26861 NVYPYFAYIGNKQSIS 26908
Score = 29.5 bits (58), Expect(2) = 7e-040
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYFAY N + IS
Sbjct: 16587 NVYPYFAYIGNKQSIS 16634
Score = 27.2 bits (53), Expect(3) = 2e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 277 NVYPYFAYRDNPRDI 321
NV+PYFAY +P++I
Sbjct: 29132 NVHPYFAYIGDPQNI 29088
Score = 24.9 bits (48), Expect(2) = 3e-040
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 277 NVYPYFAY 300
NVYPYFAY
Sbjct: 1411 NVYPYFAY 1434
Score = 24.0 bits (46), Expect(3) = 2e-030
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDI 321
NVY YF+Y + +DI
Sbjct: 64163 NVYTYFSYISDTKDI 64207
>gb|BE239884.1|BE239884 EST403933 MHRP- Medicago truncatula cDNA clone pMHRP-38N17, mRNA
sequence
Length = 614
Score = 162 bits (348), Expect(2) = 3e-040
Identities = 67/116 (57%), Positives = 83/116 (71%)
Frame = +2 / +2
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK GA V++VVSE GWPSA G AS DNA Y +
Sbjct: 110 QQGNNAVGYQNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAAGDSASTDNAATYYRN 289
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*L 706
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF +K P Y I FN*+
Sbjct: 290 LINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSPKYQISFN*I 457
Score = 24.9 bits (48), Expect(2) = 3e-040
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 277 NVYPYFAY 300
NVYPYFAY
Sbjct: 41 NVYPYFAY 64
>gb|DW015065.1|DW015065 EST1224026 MTY Medicago truncatula cDNA clone MTYA045, mRNA
sequence
Length = 718
Score = 156 bits (335), Expect(2) = 7e-040
Identities = 65/116 (56%), Positives = 81/116 (69%)
Frame = +2 / +3
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK G +V++VVSE GWPS GG AS DNA Y Q
Sbjct: 207 QQGNNDVGYQNLFDAQLDSVYAALEKVGGTDVKIVVSESGWPSDGGDSASTDNASTYYQN 386
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*L 706
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF +K Y FN*+
Sbjct: 387 LINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSSKYQTSFN*I 554
Score = 29.5 bits (58), Expect(2) = 7e-040
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYFAY N + IS
Sbjct: 138 NVYPYFAYIGNKQSIS 185
>gb|CA921296.1|CA921296 EST639014 MTUS Medicago truncatula cDNA clone MTUS-38F3, mRNA
sequence
Length = 505
Score = 162 bits (348), Expect = 8e-039
Identities = 67/116 (57%), Positives = 83/116 (71%)
Frame = +2 / -1
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK GA V++VVSE GWPSA G AS DNA Y +
Sbjct: 502 QQGNNAVGYQNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAAGDSASTDNAATYYRN 323
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*L 706
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF +K P Y I FN*+
Sbjct: 322 LINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSPKYQISFN*I 155
>gb|AJ845937.1|AJ845937 AJ845937 MtSNF Medicago truncatula cDNA clone MtNF14B04N1, mRNA
sequence
Length = 555
Score = 161 bits (347), Expect = 1e-038
Identities = 67/116 (57%), Positives = 83/116 (71%)
Frame = +2 / +3
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK GA V++VVSE GWPSA G AS DNA Y +
Sbjct: 54 QQGNNAVGYQNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAAGDSASTDNAATYYRN 233
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*L 706
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF +K P Y I FN*+
Sbjct: 234 LINHVKNGTPKRPGAIETYLFAMFDENQKTGASTEQHFGLFNPDKSPKYQIGFN*I 401
>gb|CG952481.1|CG952481 MBENF42TR mth2 Medicago truncatula genomic clone 7G12, DNA sequence
Length = 924
Score = 154 bits (331), Expect(2) = 6e-038
Identities = 63/109 (57%), Positives = 78/109 (71%)
Frame = +2 / -2
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK GA V++VVSE GWPSA G AS DNA Y +
Sbjct: 332 QQGNNAVGYQNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAAGDSASTDNAATYYRN 153
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVY 685
LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF +K P Y
Sbjct: 152 LINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSPKY 6
Score = 24.9 bits (48), Expect(2) = 6e-038
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / -2
Query: 277 NVYPYFAY 300
NVYPYFAY
Sbjct: 401 NVYPYFAY 378
>gb|BE239936.1|BE239936 EST403985 MHRP- Medicago truncatula cDNA clone pMHRP-41A20, mRNA
sequence
Length = 532
Score = 153 bits (329), Expect(2) = 1e-037
Identities = 63/110 (57%), Positives = 80/110 (72%)
Frame = +2 / +2
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
+ Y NLFDA +D++ AALEK GA V++VVSE GWPSA G AS DNA Y + I+HV
Sbjct: 131 VGYQNLFDAQLDSLYAALEKVGASGVKIVVSESGWPSAAGDSASTDNAATYYRNWINHVK 310
Query: 557 RGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*L 706
GTPKR G +ET++FAMF+ENQK G TE++FGLF +K P Y + FN*+
Sbjct: 311 NGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLFNPDKSPKYQMSFN*I 460
Score = 24.9 bits (48), Expect(2) = 1e-037
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 277 NVYPYFAY 300
NVYPYFAY
Sbjct: 42 NVYPYFAY 65
>gb|AC144539.7| Medicago truncatula clone mth2-11o10, complete sequence
Length = 113167
Score = 118 bits (253), Expect(2) = 1e-030
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2 / -2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF A+ DNAR Y LI HV G
Sbjct: 83331 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFAATYDNARVYLDNLIRHVNGG 83152
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+EN+K
Sbjct: 83151 TPMRSGPIETYIFGLFDENKK 83089
Score = 117 bits (251), Expect(3) = 3e-034
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDAM+D+V AAL+ G V VVVSE GWPS GG S DNAR Y LI HVG+G
Sbjct: 98517 YQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGAATSYDNARIYLDNLIRHVGKG 98696
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+R ET++FAMF+ENQK
Sbjct: 98697 TPRRPWATETYIFAMFDENQK 98759
Score = 117 bits (251), Expect(3) = 5e-035
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2 / -3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV G
Sbjct: 90095 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGG 89916
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+ENQK
Sbjct: 89915 TPMRSGPIETYIFGLFDENQK 89853
Score = 36.3 bits (73), Expect(2) = 1e-030
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / -2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 83436 NIYSYFSYKDNPKDIS 83389
Score = 36.3 bits (73), Expect(3) = 5e-035
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 90200 NIYSYFSYKDNPKDIS 90153
Score = 34.1 bits (68), Expect(3) = 3e-034
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYF++ NPRDIS
Sbjct: 98412 NVYPYFSHVGNPRDIS 98459
Score = 33.1 bits (66), Expect(3) = 3e-034
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 98772 EKHFGVFYPNKQKKYPFGF 98828
Score = 33.1 bits (66), Expect(3) = 5e-035
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 89840 EKHFGVFYPNKQKKYPFGF 89784
>gb|AC149491.2| Medicago truncatula chromosome 2 BAC clone mth2-46o19, complete
sequence
Length = 106587
Score = 118 bits (253), Expect(2) = 1e-030
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF A+ DNAR Y LI HV G
Sbjct: 89490 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFAATYDNARVYLDNLIRHVNGG 89669
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+EN+K
Sbjct: 89670 TPMRSGPIETYIFGLFDENKK 89732
Score = 117 bits (251), Expect(3) = 5e-035
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2 / +1
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV G
Sbjct: 82726 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGG 82905
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+ENQK
Sbjct: 82906 TPMRSGPIETYIFGLFDENQK 82968
Score = 117 bits (251), Expect(3) = 3e-034
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = +2 / -3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDAM+D+V AAL+ G V VVVSE GWPS GG S DNAR Y LI HVG+G
Sbjct: 74305 YQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGAATSYDNARIYLDNLIRHVGKG 74126
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+R ET++FAMF+ENQK
Sbjct: 74125 TPRRPWATETYIFAMFDENQK 74063
Score = 36.3 bits (73), Expect(2) = 1e-030
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 89385 NIYSYFSYKDNPKDIS 89432
Score = 36.3 bits (73), Expect(3) = 5e-035
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 82621 NIYSYFSYKDNPKDIS 82668
Score = 34.1 bits (68), Expect(3) = 3e-034
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYF++ NPRDIS
Sbjct: 74410 NVYPYFSHVGNPRDIS 74363
Score = 33.1 bits (66), Expect(3) = 5e-035
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 82981 EKHFGVFYPNKQKKYPFGF 83037
Score = 33.1 bits (66), Expect(3) = 3e-034
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 74050 EKHFGVFYPNKQKKYPFGF 73994
>gb|AJ845852.1|AJ845852 AJ845852 MtSNF Medicago truncatula cDNA clone MtNF11M23N1, mRNA
sequence
Length = 519
Score = 117 bits (251), Expect(3) = 6e-035
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV G
Sbjct: 186 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGG 365
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+ENQK
Sbjct: 366 TPMRSGPIETYIFGLFDENQK 428
Score = 36.3 bits (73), Expect(3) = 6e-035
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 81 NIYSYFSYKDNPKDIS 128
Score = 33.1 bits (66), Expect(3) = 6e-035
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 441 EKHFGVFYPNKQKKYPFGF 497
>gb|BG588681.1|BG588681 EST490490 MHRP- Medicago truncatula cDNA clone pMHRP-57O11, mRNA
sequence
Length = 718
Score = 117 bits (251), Expect(3) = 3e-034
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDAM+D+V AAL+ G V VVVSE GWPS GG S DNAR Y LI HVG+G
Sbjct: 177 YQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGAATSYDNARIYLDNLIRHVGKG 356
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+R ET++FAMF+ENQK
Sbjct: 357 TPRRPWATETYIFAMFDENQK 419
Score = 34.1 bits (68), Expect(3) = 3e-034
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYF++ NPRDIS
Sbjct: 72 NVYPYFSHVGNPRDIS 119
Score = 33.1 bits (66), Expect(3) = 3e-034
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 432 EKHFGVFYPNKQKKYPFGF 488
>gb|BF644711.1|BF644711 NF019E05EC1F1038 Elicited cell culture Medicago truncatula cDNA
clone NF019E05EC 5', mRNA sequence
Length = 675
Score = 117 bits (251), Expect(3) = 3e-034
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDAM+D+V AAL+ G V VVVSE GWPS GG S DNAR Y LI HVG+G
Sbjct: 222 YQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGAATSYDNARIYLDNLIRHVGKG 401
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+R ET++FAMF+ENQK
Sbjct: 402 TPRRPWATETYIFAMFDENQK 464
Score = 34.1 bits (68), Expect(3) = 3e-034
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYF++ NPRDIS
Sbjct: 117 NVYPYFSHVGNPRDIS 164
Score = 33.1 bits (66), Expect(3) = 3e-034
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 477 EKHFGVFYPNKQKKYPFGF 533
>gb|BQ156922.1|BQ156922 NF098G01IR1F1008 Irradiated Medicago truncatula cDNA clone
NF098G01IR 5', mRNA sequence
Length = 662
Score = 115 bits (246), Expect(3) = 3e-034
Identities = 45/81 (55%), Positives = 58/81 (71%)
Frame = +2 / -2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVV E GWPS GGF + DNAR Y LI HV G
Sbjct: 541 YQNLFDALLDSLHAAIDNTGIGFVKVVVXESGWPSDGGFATTYDNARVYLDNLIRHVKGG 362
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R GP+ET++F +F+ENQK
Sbjct: 361 TPMRXGPIETYIFGLFDENQK 299
Score = 36.3 bits (73), Expect(3) = 3e-034
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / -1
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 647 NIYSYFSYKDNPKDIS 600
Score = 33.1 bits (66), Expect(3) = 3e-034
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 286 EKHFGVFYPNKQKKYPFGF 230
>gb|CX526663.1|CX526663 s13dNF25C10AT082_513838 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 645
Score = 117 bits (251), Expect(3) = 5e-034
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2 / -2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV G
Sbjct: 485 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGG 306
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+ENQK
Sbjct: 305 TPMRSGPIETYIFGLFDENQK 243
Score = 33.1 bits (66), Expect(3) = 5e-034
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 230 EKHFGVFYPNKQKKYPFGF 174
Score = 33.1 bits (66), Expect(3) = 5e-034
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y Y +Y+DNP+DIS
Sbjct: 590 NIYSYXSYKDNPKDIS 543
>gb|BE942469.1|BE942469 EST422048 MGHG Medicago truncatula cDNA clone pMGHG-8L9, mRNA
sequence
Length = 601
Score = 117 bits (251), Expect(3) = 6e-033
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV G
Sbjct: 311 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGG 490
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+ENQK
Sbjct: 491 TPMRSGPIETYIFGLFDENQK 553
Score = 36.3 bits (73), Expect(3) = 6e-033
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 206 NIYSYFSYKDNPKDIS 253
Score = 26.3 bits (51), Expect(3) = 6e-033
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQ 676
EK+FG+FY NKQ
Sbjct: 566 EKHFGVFYPNKQ 601
>gb|BQ153601.1|BQ153601 NF040D11IR1F1093 Irradiated Medicago truncatula cDNA clone
NF040D11IR 5', mRNA sequence
Length = 635
Score = 111 bits (237), Expect(3) = 1e-031
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV G
Sbjct: 317 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSXGGFATTYDNARVYLDNLIRHVKGG 496
Query: 563 TPKRTGPLETFVFAMFNEN 619
TP R+GP+ET++F +F+ N
Sbjct: 497 TPMRSGPIETYIFGLFDXN 553
Score = 36.3 bits (73), Expect(3) = 1e-031
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 212 NIYSYFSYKDNPKDIS 259
Score = 28.1 bits (55), Expect(3) = 1e-031
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 644 KNFGLFYGNKQPVYPIRF 697
K+FG+FY NK YP F
Sbjct: 575 KHFGVFYPNKXKKYPFGF 628
>gb|BQ154587.1|BQ154587 NF077H06IR1F1060 Irradiated Medicago truncatula cDNA clone
NF077H06IR 5', mRNA sequence
Length = 640
Score = 117 bits (250), Expect(3) = 7e-031
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2 / -1
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV G
Sbjct: 541 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGG 362
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R GP+ET++F +F+ENQK
Sbjct: 361 TPMRXGPIETYIFGLFDENQK 299
Score = 33.1 bits (66), Expect(3) = 7e-031
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 286 EKHFGVFYPNKQKKYPFGF 230
Score = 23.1 bits (44), Expect(3) = 7e-031
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 289 YFAYRDNPR 315
YF+Y+DNP+
Sbjct: 635 YFSYKDNPK 609
>gb|BG457631.1|BG457631 NF105D01PL1F1012 Phosphate starved leaf Medicago truncatula cDNA
clone NF105D01PL 5', mRNA sequence
Length = 619
Score = 118 bits (253), Expect(2) = 1e-030
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF A+ DNAR Y LI HV G
Sbjct: 218 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFAATYDNARVYLDNLIRHVNGG 397
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+EN+K
Sbjct: 398 TPMRSGPIETYIFGLFDENKK 460
Score = 36.3 bits (73), Expect(2) = 1e-030
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y+DNP+DIS
Sbjct: 113 NIYSYFSYKDNPKDIS 160
>gb|AW689225.1|AW689225 NF016H03ST1F1000 Developing stem Medicago truncatula cDNA clone
NF016H03ST 5', mRNA sequence
Length = 635
Score = 118 bits (253), Expect(2) = 6e-029
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +2 / +2
Query: 359 RDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQG 538
+ N + Y NLFDA +D+V AALEK GA V++VVSE GWPSAGG AS DNA Y +
Sbjct: 368 QQGNNQVGYRNLFDAQLDSVYAALEKVGASGVKIVVSESGWPSAGGDSASTDNAATYYRN 547
Query: 539 LIDHVGRGTPKRTGPLETFVFAMFNE 616
LI+HV GTP R G +ET++ MF+E
Sbjct: 548 LINHVRNGTPXRPGAIETYLLPMFDE 625
Score = 30.4 bits (60), Expect(2) = 6e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
NVYPYFAY +N + IS
Sbjct: 299 NVYPYFAYINNKQSIS 346
>gb|AJ497453.1|AJ497453 AJ497453 MTFLOW Medicago truncatula cDNA clone mt--abc955109e01,
mRNA sequence
Length = 352
Score = 127 bits (273), Expect = 2e-028
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = +2 / +1
Query: 443 APNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQ 622
A V++VVSE GWPSAGG AS DNA Y + LI+HV GTPKR G +ET++FAMF+ENQ
Sbjct: 1 ASGVKIVVSESGWPSAGGDSASTDNAATYYRNLINHVRNGTPKRPGAIETYLFAMFDENQ 180
Query: 623 KGGDPTEKNFGLFYGNKQPVYPIRFN* 703
K G TE++FGLF N+ P Y I FN*
Sbjct: 181 KTGAATEQHFGLFNPNRTPKYQISFN* 261
>gb|AJ548101.1|AJ548101 AJ548101 MTAPHEU Medicago truncatula cDNA clone mtaehac110002g04,
mRNA sequence
Length = 322
Score = 111 bits (236), Expect(2) = 4e-027
Identities = 44/78 (56%), Positives = 57/78 (73%)
Frame = +2 / -3
Query: 392 LFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPK 571
LFDA++D++ AA++ G V+VVVSE GWPS GGF + DNAR Y LI HV GTP
Sbjct: 320 LFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGGTPM 141
Query: 572 RTGPLETFVFAMFNENQK 625
R GP+ET++F +F+ENQK
Sbjct: 140 RPGPIETYIFGLFDENQK 87
Score = 32.2 bits (64), Expect(2) = 4e-027
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPI 691
EK+FG+FY NKQ YP+
Sbjct: 74 EKHFGVFYPNKQKKYPL 24
>gb|AJ497126.1|AJ497126 AJ497126 MTFLOW Medicago truncatula cDNA clone mt--abc955104h08,
mRNA sequence
Length = 442
Score = 111 bits (238), Expect(2) = 5e-027
Identities = 46/75 (61%), Positives = 55/75 (73%)
Frame = +2 / +2
Query: 479 WPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGL 658
WPSAGG AS DNA Y + LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGL
Sbjct: 92 WPSAGGDSASTDNAATYYRNLINHVRNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGL 271
Query: 659 FYGNKQPVYPIRFN* 703
F N+ P Y I FN*
Sbjct: 272 FNPNRTPKYQISFN* 316
Score = 30.9 bits (61), Expect(2) = 5e-027
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 419 VAALEKAGAPNVRVVVSEXG 478
+ ALEK GA V++VVSE G
Sbjct: 33 IRALEKVGASGVKIVVSESG 92
>gb|CX528751.1|CX528751 s13dNF07E03MJ019_243571 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 549
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 46/77 (59%), Positives = 54/77 (70%)
Frame = +2 / -1
Query: 395 FDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKR 574
FDAM+D+V AAL+ G V VVVSE GWPS GG S DNAR Y LI HVG+GTP+R
Sbjct: 546 FDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGAATSYDNARIYLDNLIRHVGKGTPRR 367
Query: 575 TGPLETFVFAMFNENQK 625
ET++FAMF+EN K
Sbjct: 366 PWATETYIFAMFDENPK 316
Score = 33.1 bits (66), Expect(2) = 2e-026
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 303 EKHFGVFYPNKQKKYPFGF 247
>gb|AL378824.1|AL378824 MtBB40F11R1 MtBB Medicago truncatula cDNA clone MtBB40F11 T7, mRNA
sequence
Length = 487
Score = 118 bits (253), Expect = 1e-025
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AA++ G V+VVVSE GWPS GGF A+ DNAR Y LI HV G
Sbjct: 19 YQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFAATYDNARVYLDNLIRHVNGG 198
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP R+GP+ET++F +F+EN+K
Sbjct: 199 TPMRSGPIETYIFGLFDENKK 261
>gb|BQ152567.1|BQ152567 NF021A06IR1F1049 Irradiated Medicago truncatula cDNA clone
NF021A06IR 5', mRNA sequence
Length = 579
Score = 97.3 bits (206), Expect(3) = 4e-025
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +2 / +3
Query: 425 ALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFA 604
A++ G V+VVVSE GWPS GGF + DNAR Y LI HV GTP R+GP+ET++F
Sbjct: 93 AIDNTGIGFVKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGGTPMRSGPIETYIFG 272
Query: 605 MFNENQK 625
+F+ENQK
Sbjct: 273 LFDENQK 293
Score = 33.1 bits (66), Expect(3) = 4e-025
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 306 EKHFGVFYPNKQKKYPFGF 362
Score = 23.5 bits (45), Expect(3) = 4e-025
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVA 424
Y NLFDA++D++ A
Sbjct: 50 YQNLFDALLDSLHA 91
>gb|BQ156366.1|BQ156366 NF092A12IR1F1097 Irradiated Medicago truncatula cDNA clone
NF092A12IR 5', mRNA sequence
Length = 503
Score = 93.6 bits (198), Expect(3) = 4e-025
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +2 / +3
Query: 452 VRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQK 625
V+VVVSE GWPS GGF + DNAR Y LI HV GTP R+GP+ET++F +F+ENQK
Sbjct: 105 VKVVVSESGWPSDGGFATTYDNARVYLDNLIRHVKGGTPMRSGPIETYIFGLFDENQK 278
Score = 33.1 bits (66), Expect(3) = 4e-025
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG+FY NKQ YP F
Sbjct: 291 EKHFGVFYPNKQKKYPFGF 347
Score = 27.2 bits (53), Expect(3) = 4e-025
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALE 433
Y NLFDA++D++ AA++
Sbjct: 35 YQNLFDALLDSLHAAID 85
>gb|AJ497244.1|AJ497244 AJ497244 MTFLOW Medicago truncatula cDNA clone mt--abc955106g06,
mRNA sequence
Length = 358
Score = 113 bits (241), Expect = 5e-024
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +2 / +2
Query: 470 EXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKN 649
+ GWPSAGG AS DNA Y + LI+HV GTPKR G +ET++FAMF+ENQK G +E++
Sbjct: 35 KSGWPSAGGDSASTDNAATYYRNLINHVRNGTPKRPGAIETYLFAMFDENQKTGAASEQH 214
Query: 650 FGLFYGNKQPVYPIRFN* 703
FGLF N+ P Y I FN*
Sbjct: 215 FGLFNPNRTPKYQISFN* 268
>emb|CR936328.1| Medicago truncatula chromosome 5 clone mth4-1f18, COMPLETE SEQUENCE
Length = 194592
Score = 66.1 bits (138), Expect(3) = 1e-023
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +2 / -3
Query: 362 DNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
D GNGL Y NLFDA +DAV AAL + ++ VVVSE GWPS G
Sbjct: 41878 DAGNGLRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKG 41747
Score = 54.2 bits (112), Expect(3) = 1e-023
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
L F+FA+FNENQK G +E+NFGLFY +++ VY +
Sbjct: 41638 LTVFLFALFNENQKPGPTSERNFGLFYPDEKKVYNV 41531
Score = 28.6 bits (56), Expect(3) = 1e-023
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1 / -3
Query: 250 RAXGXRXSPNVYPYFAYRDNPRDIS 324
R G NVYP+FAY N IS
Sbjct: 41992 RETGSYLMVNVYPFFAYESNADVIS 41918
>gb|AC137995.31| Medicago truncatula clone mth2-11j1, complete sequence
Length = 146749
Score = 66.1 bits (138), Expect(3) = 1e-023
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +2 / -3
Query: 362 DNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
D GNGL Y NLFDA +DAV AAL + ++ VVVSE GWPS G
Sbjct: 130175 DAGNGLRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKG 130044
Score = 54.2 bits (112), Expect(3) = 1e-023
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
L F+FA+FNENQK G +E+NFGLFY +++ VY +
Sbjct: 129935 LTVFLFALFNENQKPGPTSERNFGLFYPDEKKVYNV 129828
Score = 28.6 bits (56), Expect(3) = 1e-023
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1 / -3
Query: 250 RAXGXRXSPNVYPYFAYRDNPRDIS 324
R G NVYP+FAY N IS
Sbjct: 130289 RETGSYLMVNVYPFFAYESNADVIS 130215
>gb|BF520734.1|BF520734 EST458207 DSIL Medicago truncatula cDNA clone pDSIL-39A20, mRNA
sequence
Length = 647
Score = 66.1 bits (138), Expect(3) = 1e-023
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +2 / +3
Query: 362 DNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
D GNGL Y NLFDA +DAV AAL + ++ VVVSE GWPS G
Sbjct: 216 DAGNGLRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKG 347
Score = 54.2 bits (112), Expect(3) = 1e-023
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2 / +3
Query: 584 LETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
L F+FA+FNENQK G +E+NFGLFY +++ VY +
Sbjct: 456 LTVFLFALFNENQKPGPTSERNFGLFYPDEKKVYNV 563
Score = 28.6 bits (56), Expect(3) = 1e-023
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1 / +3
Query: 250 RAXGXRXSPNVYPYFAYRDNPRDIS 324
R G NVYP+FAY N IS
Sbjct: 102 RETGSYLMVNVYPFFAYESNADVIS 176
>emb|CR494458.1| mth2-168I11FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 726
Score = 59.3 bits (123), Expect(3) = 8e-023
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2 / +3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
FQP + D L+Y+N+ A +DAV AA++ G NV V VSE GWPS G
Sbjct: 225 FQPNEGLVDPNTNLHYDNMLYAQIDAVYAAIKVIGYTNVEVKVSETGWPSNG 380
Score = 51.9 bits (107), Expect(3) = 8e-023
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2 / +3
Query: 581 PLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
P++ +VFA+FNE+ K G +E+N+GL+Y + PVY I
Sbjct: 486 PIDVYVFALFNEDLKPGPASERNYGLYYPDGSPVYNI 596
Score = 35.0 bits (70), Expect(3) = 8e-023
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N YP+FAY+DNP ++S
Sbjct: 162 NAYPFFAYKDNPNEVS 209
>emb|CR482269.1| mth2-146C21FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 654
Score = 59.3 bits (123), Expect(3) = 8e-023
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2 / +3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
FQP + D L+Y+N+ A +DAV AA++ G NV V VSE GWPS G
Sbjct: 225 FQPNEGLVDPNTNLHYDNMLYAQIDAVYAAIKVIGYTNVEVKVSETGWPSNG 380
Score = 51.9 bits (107), Expect(3) = 8e-023
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2 / +3
Query: 581 PLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
P++ +VFA+FNE+ K G +E+N+GL+Y + PVY I
Sbjct: 486 PIDVYVFALFNEDLKPGPASERNYGLYYPDGSPVYNI 596
Score = 35.0 bits (70), Expect(3) = 8e-023
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N YP+FAY+DNP ++S
Sbjct: 162 NAYPFFAYKDNPNEVS 209
>gb|CA921855.1|CA921855 EST639573 MTUS Medicago truncatula cDNA clone MTUS-45C4, mRNA
sequence
Length = 743
Score = 66.6 bits (139), Expect(3) = 2e-021
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +2 / -3
Query: 362 DNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
D GNGL Y N+FDA +DAV AAL +VRVVVSE GWPS G
Sbjct: 612 DPGNGLKYYNIFDAQIDAVFAALNVLQYDDVRVVVSETGWPSKG 481
Score = 48.3 bits (99), Expect(3) = 2e-021
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
L ++FA+FNEN K G +E+NFG+FY + + VY + F
Sbjct: 372 LTVYLFALFNENGKVGLTSERNFGMFYPDMKKVYDVPF 259
Score = 26.7 bits (52), Expect(3) = 2e-021
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDIS 324
NVYP+FAY N IS
Sbjct: 699 NVYPFFAYESNADVIS 652
>gb|CB065517.1|CB065517 EST645198 HOGA Medicago truncatula cDNA clone HOGA-19M3, mRNA
sequence
Length = 466
Score = 104 bits (222), Expect = 2e-021
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = +2 / -1
Query: 482 PSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLF 661
PSA G AS DNA Y + LI+HV GTPKR G +ET++FAMF+ENQK G TE++FGLF
Sbjct: 466 PSAAGDSASTDNAATYYRNLINHVKNGTPKRPGAIETYLFAMFDENQKTGAATEQHFGLF 287
Query: 662 YGNKQPVYPIRFN*L 706
+K P Y I FN*+
Sbjct: 286 NPDKSPKYQISFN*I 242
>gb|AC135318.40| Medicago truncatula clone mth2-36o3, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 120801
Score = 64.8 bits (135), Expect(4) = 4e-021
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2 / -3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
L+Y NLFDAMVD++ AALEK A NV +++ E GWP+AG
Sbjct: 94156 LSYTNLFDAMVDSIYAALEKIDAKNVSLIIGETGWPAAG 94040
Score = 35.9 bits (72), Expect(4) = 4e-021
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDI 321
NVYPYFAY NP+DI
Sbjct: 94252 NVYPYFAYASNPKDI 94208
Score = 29.9 bits (59), Expect(4) = 4e-021
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPI 691
E+N+GLFY + PVYP+
Sbjct: 93883 EQNWGLFYHDLTPVYPL 93833
Score = 26.3 bits (51), Expect(4) = 4e-021
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
++ F+FAMF+E+QK
Sbjct: 93937 IDAFIFAMFDEDQK 93896
>gb|AC149129.3| Medicago truncatula chromosome 7 BAC clone mth2-139m18, complete
sequence
Length = 106423
Score = 64.8 bits (135), Expect(4) = 4e-021
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2 / -1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAG 493
L+Y NLFDAMVD++ AALEK A NV +++ E GWP+AG
Sbjct: 12445 LSYTNLFDAMVDSIYAALEKIDAKNVSLIIGETGWPAAG 12329
Score = 35.9 bits (72), Expect(4) = 4e-021
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 277 NVYPYFAYRDNPRDI 321
NVYPYFAY NP+DI
Sbjct: 12541 NVYPYFAYASNPKDI 12497
Score = 29.9 bits (59), Expect(4) = 4e-021
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQPVYPI 691
E+N+GLFY + PVYP+
Sbjct: 12172 EQNWGLFYHDLTPVYPL 12122
Score = 26.3 bits (51), Expect(4) = 4e-021
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2 / -1
Query: 584 LETFVFAMFNENQK 625
++ F+FAMF+E+QK
Sbjct: 12226 IDAFIFAMFDEDQK 12185
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 553,461,549
Number of Sequences: 392609
Number of extensions: 5797783
Number of successful extensions: 22430
Number of sequences better than 1.0e-020: 46
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 30281851476
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)