TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 1804898.2.1
         (739 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BQ165539.1|BQ165539  EST611408 KVKC Medicago truncatula c...    70   2e-027
gb|AW329216.2|AW329216  N200428e rootphos(-) Medicago trunca...    92   9e-026
gb|AW560370.1|AW560370  EST315418 DSIR Medicago truncatula c...    70   1e-025
gb|AL388318.1|AL388318  MtBC47H04F1 MtBC Medicago truncatula...    70   1e-025
gb|CA919746.1|CA919746  EST637464 MTUS Medicago truncatula c...    70   2e-023
gb|CA920377.1|CA920377  EST638095 MTUS Medicago truncatula c...    67   8e-023
gb|CB894426.1|CB894426  EST647218 HOGA Medicago truncatula c...    76   9e-023
gb|AJ547897.1|AJ547897  AJ547897 MTAPHEU Medicago truncatula...    70   1e-021
gb|CX529311.1|CX529311  s13dNF02A04MJ021_244679 Methyl Jasmo...    70   1e-021
gb|CA921971.1|CA921971  EST639689 MTUS Medicago truncatula c...    66   2e-021
gb|DW018810.1|DW018810  EST1227771 MTY Medicago truncatula c...    66   2e-021
gb|BQ165420.1|BQ165420  EST611277 KVKC Medicago truncatula c...    66   2e-021
gb|CA920370.1|CA920370  EST638088 MTUS Medicago truncatula c...    64   7e-021
>gb|BQ165539.1|BQ165539 EST611408 KVKC Medicago truncatula cDNA clone pKVKC-10A2, mRNA
           sequence
          Length = 762

 Score = 70.3 bits (147), Expect(3) = 2e-027
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = +2 / -1

                                                          
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           DL ++  VNG ER E EW  +FL+AGF +YKITH  G  S+IEVFP*
Sbjct: 348 DLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 208

 Score = 67.5 bits (141), Expect(3) = 2e-027
 Identities = 24/71 (33%), Positives = 41/71 (57%)
 Frame = +2 / -1

                                                                       
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXX 265
           V +   G+  L + GGDMFE IP   +++LK +LHDW++++C+KI+++C           
Sbjct: 603 VVDGLQGSENLKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEG 424

                      
Query: 266 XXXXXDTVLGS 298
                D V+G+
Sbjct: 423 KVIIIDAVMGN 391

 Score = 23.5 bits (45), Expect(3) = 2e-027
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2 / -1

                     
Query: 59  CTVMDLPHVV 88
           C V DLPHVV
Sbjct: 627 CIVFDLPHVV 598
>gb|AW329216.2|AW329216 N200428e rootphos(-) Medicago truncatula cDNA clone MHRP-17E8, mRNA
           sequence
          Length = 614

 Score = 91.8 bits (194), Expect(2) = 9e-026
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = +2 / -1

                                                                      
Query: 56  RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
           +C V DLP VVA   +    LS+ GGDMF+ IP ADA+MLKWILHDW ++ CIKI++ C
Sbjct: 557 KCVVYDLPQVVANLSSACDNLSYVGGDMFKSIPQADAIMLKWILHDWTDEICIKILKTC 381

 Score = 48.3 bits (99), Expect(2) = 9e-026
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +2 / -1

                                                       
Query: 359 ILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           I+  +NG ER   EW+ +F+ AGF+DYKI       S+IE +P*
Sbjct: 266 IMMGINGKERTGKEWKHLFVEAGFKDYKIFPLFENRSLIEAYP* 135
>gb|AW560370.1|AW560370 EST315418 DSIR Medicago truncatula cDNA clone pDSIR-26L24, mRNA
           sequence
          Length = 619

 Score = 70.3 bits (147), Expect(2) = 1e-025
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = +2 / -3

                                                          
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           DL ++  VNG ER E EW  +FL+AGF +YKITH  G  S+IEVFP*
Sbjct: 356 DLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 216

 Score = 67.5 bits (141), Expect(2) = 1e-025
 Identities = 24/71 (33%), Positives = 41/71 (57%)
 Frame = +2 / -3

                                                                       
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXX 265
           V +   G+  L + GGDMFE IP   +++LK +LHDW++++C+KI+++C           
Sbjct: 611 VVDGLQGSENLKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEG 432

                      
Query: 266 XXXXXDTVLGS 298
                D V+G+
Sbjct: 431 KVIIIDAVMGN 399
>gb|AL388318.1|AL388318 MtBC47H04F1 MtBC Medicago truncatula cDNA clone MtBC47H04 T3, mRNA
           sequence
          Length = 477

 Score = 70.3 bits (147), Expect(2) = 1e-025
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = +2 / +3

                                                          
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           DL ++  VNG ER E EW  +FL+AGF +YKITH  G  S+IEVFP*
Sbjct: 264 DLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 404

 Score = 67.5 bits (141), Expect(2) = 1e-025
 Identities = 24/71 (33%), Positives = 41/71 (57%)
 Frame = +2 / +3

                                                                       
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXX 265
           V +   G+  L + GGDMFE IP   +++LK +LHDW++++C+KI+++C           
Sbjct: 9   VVDGLQGSENLKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEG 188

                      
Query: 266 XXXXXDTVLGS 298
                D V+G+
Sbjct: 189 KVIIIDAVMGN 221
>gb|CA919746.1|CA919746 EST637464 MTUS Medicago truncatula cDNA clone MTUS-17E5, mRNA
           sequence
          Length = 560

 Score = 70.3 bits (147), Expect(3) = 2e-023
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = +2 / -2

                                                    
Query: 101 AGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIM 223
           +GT  L+F GGDMF+ IP ADA++LKW+LHDWD++  +KI+
Sbjct: 487 SGTQNLNFVGGDMFKSIPPADAVLLKWVLHDWDDELSLKIL 365

 Score = 56.1 bits (116), Expect(3) = 2e-023
 Identities = 22/47 (46%), Positives = 32/47 (68%)
 Frame = +2 / -2

                                                          
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           D+ +++  NG ERE+ EW+++   AGF  YKIT   G  S+IEV+P*
Sbjct: 247 DMVMMTLHNGKEREKKEWKKLIYDAGFSSYKITPICGFKSLIEVYP* 107

 Score = 23.5 bits (45), Expect(3) = 2e-023
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2 / -2

                       
Query: 56  RCTVMDLPHVVA 91
           +CTV+D P VVA
Sbjct: 529 KCTVLDQPQVVA 494
>gb|CA920377.1|CA920377 EST638095 MTUS Medicago truncatula cDNA clone MTUS-27D12, mRNA
           sequence
          Length = 752

 Score = 66.6 bits (139), Expect(2) = 8e-023
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = +2 / -1

                                                            
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
           V E   G+  L++ GGDMF  +P ADA++LK +LHDW +  CIKI+++C
Sbjct: 743 VVENLCGSNNLTYVGGDMFISVPKADAVLLKAVLHDWTDKDCIKILKKC 597

 Score = 63.8 bits (133), Expect(2) = 8e-023
 Identities = 23/43 (53%), Positives = 34/43 (79%)
 Frame = +2 / -1

                                                      
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           +S VNG ER E EW+++F+ AGF+DYKI+   G+ S+IE++P*
Sbjct: 479 ISCVNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP* 351
>gb|CB894426.1|CB894426 EST647218 HOGA Medicago truncatula cDNA clone HOGA-31K19, mRNA
           sequence
          Length = 817

 Score = 76.2 bits (160), Expect(2) = 9e-023
 Identities = 28/71 (39%), Positives = 42/71 (59%)
 Frame = +2 / +3

                                                                       
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXX 265
           V +   G+  L++ GGDMF+ IP  DA++LKWILHDW++++C+KI++ C           
Sbjct: 228 VVDGLQGSENLNYVGGDMFKEIPPTDAILLKWILHDWNDEECVKILKNCKDAISKKGKQG 407

                      
Query: 266 XXXXXDTVLGS 298
                D VL S
Sbjct: 408 KVIVIDMVLES 440

 Score = 51.9 bits (107), Expect(2) = 9e-023
 Identities = 20/47 (42%), Positives = 32/47 (68%)
 Frame = +2 / +3

                                                          
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           D+ ++  + G ER + EW ++  +AGF DYKIT   G+ S+IE++P*
Sbjct: 486 DMLMMVVLAGKERNKKEWIKLISSAGFSDYKITPILGLRSLIEIYP* 626
>gb|AJ547897.1|AJ547897 AJ547897 MTAPHEU Medicago truncatula cDNA clone mtaehac110001e01,
           mRNA sequence
          Length = 576

 Score = 70.3 bits (147), Expect(2) = 1e-021
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = +2 / -1

                                                    
Query: 101 AGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIM 223
           +GT  L+F GGDMF+ IP ADA++LKW+LHDWD++  +KI+
Sbjct: 528 SGTQNLNFVGGDMFKSIPPADAVLLKWVLHDWDDELSLKIL 406

 Score = 56.1 bits (116), Expect(2) = 1e-021
 Identities = 22/47 (46%), Positives = 32/47 (68%)
 Frame = +2 / -2

                                                          
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           D+ +++  NG ERE+ EW+++   AGF  YKIT   G  S+IEV+P*
Sbjct: 287 DMVMMTLHNGKEREKKEWKKLIYDAGFSSYKITPICGFKSLIEVYP* 147
>gb|CX529311.1|CX529311 s13dNF02A04MJ021_244679 Methyl Jasmonate-Elicited Root Cell
           Suspension Culture Medicago truncatula cDNA, mRNA
           sequence
          Length = 496

 Score = 69.8 bits (146), Expect(2) = 1e-021
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = +2 / -1

                                                   
Query: 104 GTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIM 223
           GT  L+F GGDMF+ IP ADA++LKW+LHDWD++  +KI+
Sbjct: 496 GTQNLNFVGGDMFKSIPPADAVLLKWVLHDWDDELSLKIL 377

 Score = 56.1 bits (116), Expect(2) = 1e-021
 Identities = 22/47 (46%), Positives = 32/47 (68%)
 Frame = +2 / -1

                                                          
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           D+ +++  NG ERE+ EW+++   AGF  YKIT   G  S+IEV+P*
Sbjct: 259 DMVMMTLHNGKEREKKEWKKLIYDAGFSSYKITPICGFKSLIEVYP* 119
>gb|CA921971.1|CA921971 EST639689 MTUS Medicago truncatula cDNA clone MTUS-46H12, mRNA
           sequence
          Length = 693

 Score = 65.7 bits (137), Expect(2) = 2e-021
 Identities = 23/49 (46%), Positives = 37/49 (75%)
 Frame = +2 / -3

                                                            
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
           V E  +G+  L++ GGDMF  IP+ADA++LK+ILH+W +  C +I+++C
Sbjct: 475 VVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCTRILKKC 329

 Score = 60.2 bits (125), Expect(2) = 2e-021
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = +2 / -3

                                                      
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           ++ +NG ER E EW+++F+ AGF+DYKI+   G  S+IE++P*
Sbjct: 211 MACLNGKERNEEEWKKLFIEAGFQDYKISPLTGFLSLIEIYP* 83
>gb|DW018810.1|DW018810 EST1227771 MTY Medicago truncatula cDNA clone MTYBB22, mRNA
           sequence
          Length = 761

 Score = 65.7 bits (137), Expect(2) = 2e-021
 Identities = 23/49 (46%), Positives = 37/49 (75%)
 Frame = +2 / +1

                                                            
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
           V E  +G+  L++ GGDMF  IP+ADA++LK+ILH+W +  C +I+++C
Sbjct: 358 VVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCTRILKKC 504

 Score = 60.2 bits (125), Expect(2) = 2e-021
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = +2 / +1

                                                      
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           ++ +NG ER E EW+++F+ AGF+DYKI+   G  S+IE++P*
Sbjct: 622 MACLNGKERNEEEWKKLFIEAGFQDYKISPLTGFLSLIEIYP* 750
>gb|BQ165420.1|BQ165420 EST611277 KVKC Medicago truncatula cDNA clone pKVKC-9A5, mRNA
           sequence
          Length = 775

 Score = 65.7 bits (137), Expect(2) = 2e-021
 Identities = 23/49 (46%), Positives = 37/49 (75%)
 Frame = +2 / -1

                                                            
Query: 86  VAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
           V E  +G+  L++ GGDMF  IP+ADA++LK+ILH+W +  C +I+++C
Sbjct: 559 VVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCTRILKKC 413

 Score = 60.2 bits (125), Expect(2) = 2e-021
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = +2 / -1

                                                      
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           ++ +NG ER E EW+++F+ AGF+DYKI+   G  S+IE++P*
Sbjct: 295 MACLNGKERNEEEWKKLFIEAGFQDYKISPLTGFLSLIEIYP* 167
>gb|CA920370.1|CA920370 EST638088 MTUS Medicago truncatula cDNA clone MTUS-27C12, mRNA
           sequence
          Length = 757

 Score = 63.8 bits (133), Expect(2) = 7e-021
 Identities = 23/43 (53%), Positives = 34/43 (79%)
 Frame = +2 / -3

                                                      
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
           +S VNG ER E EW+++F+ AGF+DYKI+   G+ S+IE++P*
Sbjct: 479 ISCVNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP* 351

 Score = 60.2 bits (125), Expect(2) = 7e-021
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +2 / -3

                                              
Query: 128 GGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
           GGDMF  +P ADA++LK +LHDW +  CIKI+++C
Sbjct: 701 GGDMFISVPKADAVLLKAVLHDWTDKDCIKILKKC 597
  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 585,088,274
Number of Sequences: 392609
Number of extensions: 7986948
Number of successful extensions: 48413
Number of sequences better than 1.0e-020: 13
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 24074297995
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)