TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1724812.2.1
(804 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI308457.1|BI308457 EST529867 GPOD Medicago truncatula c... 144 2e-033
gb|CX522320.1|CX522320 s13dNF78B06VI046_470444 Virus-Infect... 144 2e-033
gb|AQ580273.1|AQ580273 T135889b shotgun sub-library of BAC ... 136 5e-031
gb|AQ580287.1|AQ580287 T135903b shotgun sub-library of BAC ... 136 5e-031
gb|AW329251.2|AW329251 N200469e rootphos(-) Medicago trunca... 136 5e-031
gb|BG588616.1|BG588616 EST490425 MHRP- Medicago truncatula ... 136 5e-031
gb|AC147407.10| Medicago truncatula clone mth2-159b14, comp... 136 5e-031
emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-1... 136 5e-031
gb|CG949887.1|CG949887 MBEGH16TF mth2 Medicago truncatula g... 127 2e-030
gb|CA921682.1|CA921682 EST639400 MTUS Medicago truncatula c... 129 6e-029
gb|CA920182.1|CA920182 EST637900 MTUS Medicago truncatula c... 119 5e-028
gb|AW127513.2|AW127513 M110722 DSIL Medicago truncatula cDN... 119 7e-026
gb|BG456632.1|BG456632 NF083B07PL1F1059 Phosphate starved l... 119 7e-026
emb|CT573077.1| Medicago truncatula chromosome 5 clone mth2... 112 8e-025
gb|CG931895.1|CG931895 MBEIL04TR mth2 Medicago truncatula g... 112 9e-025
emb|CR954194.1| Medicago truncatula chromosome 5 clone mte1... 112 8e-024
gb|AC146585.18| Medicago truncatula clone mth2-68o3, comple... 108 1e-023
gb|BI264148.1|BI264148 NF113F10PL1F1091 Phosphate starved l... 108 1e-023
emb|CR936325.2| Medicago truncatula chromosome 5 clone mth2... 111 1e-023
gb|CG931469.1|CG931469 MBEHB82TFB mth2 Medicago truncatula ... 106 4e-023
gb|BG647106.1|BG647106 EST508725 HOGA Medicago truncatula c... 109 5e-023
gb|AQ917129.1|AQ917129 T233160b Medicago truncatula BAC lib... 109 7e-023
gb|CG962256.1|CG962256 MBEME57TR mth2 Medicago truncatula g... 109 7e-023
gb|BG451009.1|BG451009 NF097G06DT1F1050 Drought Medicago tr... 109 7e-023
gb|CX522259.1|CX522259 s13dNF67C06VI040_470322 Virus-Infect... 109 7e-023
gb|CA920981.1|CA920981 EST638699 MTUS Medicago truncatula c... 63 8e-023
gb|AJ497543.1|AJ497543 AJ497543 MTFLOW Medicago truncatula ... 100 1e-022
gb|CX518878.1|CX518878 s13dNF38C09VI070_438976 Virus-Infect... 107 2e-022
gb|AC162276.2| Medicago truncatula chromosome 7 clone mth2-... 107 3e-022
gb|BG648787.1|BG648787 EST510406 HOGA Medicago truncatula c... 101 1e-021
gb|AW776615.1|AW776615 EST335680 DSIL Medicago truncatula c... 100 1e-021
gb|BF520967.1|BF520967 EST458449 DSIL Medicago truncatula c... 105 1e-021
gb|CX520110.1|CX520110 s13dNF54H04VI042_444272 Virus-Infect... 105 1e-021
gb|AC151740.21| Medicago truncatula clone mth2-82n16, compl... 102 2e-021
gb|CG938499.1|CG938499 MBEDS05TRD mth2 Medicago truncatula ... 100 2e-021
gb|CG923030.1|CG923030 MBEIN84TR mth2 Medicago truncatula g... 100 2e-021
gb|CG975026.1|CG975026 MBEHF85TF mth2 Medicago truncatula g... 100 2e-021
gb|CG947188.1|CG947188 MBEMV63TR mth2 Medicago truncatula g... 100 2e-021
gb|CX527318.1|CX527318 s13dNF42C11AT086_515148 Aphid-Infect... 100 2e-021
gb|CG945776.1|CG945776 MBEKG06TRB mth2 Medicago truncatula ... 98 3e-021
gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKI... 98 4e-021
gb|BE318556.2|BE318556 NF040H08LF1F1073 Developing leaf Med... 103 4e-021
emb|CR305941.1| mte1-26C3FM1 BAC end, cultivar Jemalong A17... 97 6e-021
emb|CR331527.1| mte1-60P1FM1 BAC end, cultivar Jemalong A17... 97 6e-021
gb|AL381439.1|AL381439 MtBC01A09F3 MtBC Medicago truncatula... 97 6e-021
gb|AC146706.8| Medicago truncatula clone mth2-108g5, comple... 102 6e-021
gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING... 102 6e-021
gb|CA916825.1|CA916825 EST640972 GPOD Medicago truncatula c... 97 8e-021
gb|AC171534.4| Medicago truncatula chromosome 7 BAC clone m... 102 8e-021
>gb|BI308457.1|BI308457 EST529867 GPOD Medicago truncatula cDNA clone pGPOD-5N24 5' end,
mRNA sequence
Length = 747
Score = 144 bits (309), Expect = 2e-033
Identities = 51/78 (65%), Positives = 65/78 (83%)
Frame = +3 / +2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFL+ ++ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WGD
Sbjct: 419 LPDGFLEGISERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWGD 598
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+AKFLVD G+G+RL
Sbjct: 599 QVTNAKFLVDVFGVGIRL 652
>gb|CX522320.1|CX522320 s13dNF78B06VI046_470444 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 466
Score = 144 bits (309), Expect = 2e-033
Identities = 51/78 (65%), Positives = 65/78 (83%)
Frame = +3 / +3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFL+ ++ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WGD
Sbjct: 15 LPDGFLEGISERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWGD 194
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+AKFLVD G+G+RL
Sbjct: 195 QVTNAKFLVDVFGVGIRL 248
>gb|AQ580273.1|AQ580273 T135889b shotgun sub-library of BAC clone 67A02 Medicago truncatula
genomic clone 67-A-02-C-025, DNA sequence
Length = 608
Score = 136 bits (291), Expect = 5e-031
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3 / -1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WG
Sbjct: 509 VLPNEFLEETNERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWG 330
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AKFLVD G+G+RL
Sbjct: 329 DQVTNAKFLVDVFGVGIRL 273
>gb|AQ580287.1|AQ580287 T135903b shotgun sub-library of BAC clone 67A02 Medicago truncatula
genomic clone 67-A-02-C-039, DNA sequence
Length = 630
Score = 136 bits (291), Expect = 5e-031
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3 / +1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WG
Sbjct: 286 VLPNEFLEETNERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWG 465
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AKFLVD G+G+RL
Sbjct: 466 DQVTNAKFLVDVFGVGIRL 522
>gb|AW329251.2|AW329251 N200469e rootphos(-) Medicago truncatula cDNA clone MHRP-18A1, mRNA
sequence
Length = 579
Score = 136 bits (291), Expect = 5e-031
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3 / +2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WG
Sbjct: 41 VLPNEFLEETNERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWG 220
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AKFLVD G+G+RL
Sbjct: 221 DQVTNAKFLVDVFGVGIRL 277
>gb|BG588616.1|BG588616 EST490425 MHRP- Medicago truncatula cDNA clone pMHRP-57C3, mRNA
sequence
Length = 678
Score = 136 bits (291), Expect = 5e-031
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3 / +1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WG
Sbjct: 124 VLPNEFLEETNERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWG 303
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AKFLVD G+G+RL
Sbjct: 304 DQVTNAKFLVDVFGVGIRL 360
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence
Length = 115857
Score = 136 bits (291), Expect = 5e-031
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3 / +3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WG
Sbjct: 94470 VLPNEFLEETNERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWG 94649
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AKFLVD G+G+RL
Sbjct: 94650 DQVTNAKFLVDVFGVGIRL 94706
>emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 on chromosome 3, complete
sequence
Length = 125291
Score = 136 bits (291), Expect = 5e-031
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +3 / -2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ RG VV WSPQ+ VLAHPS ACF+THCGWNS++E ++ GVP++ FP WG
Sbjct: 100051 VLPNEFLEETNERGKVVNWSPQEEVLAHPSVACFITHCGWNSSMEALSLGVPMLTFPAWG 99872
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AKFLVD G+G+RL
Sbjct: 99871 DQVTNAKFLVDVFGVGIRL 99815
>gb|CG949887.1|CG949887 MBEGH16TF mth2 Medicago truncatula genomic clone 49D8, DNA sequence
Length = 776
Score = 127 bits (272), Expect(2) = 2e-030
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +3 / -3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LPDG L+ RG VV WSPQ++VLAH S ACF+THCGWNS++E IA+GVPVVAFPQWG
Sbjct: 531 MLPDGILEKTKSRGKVVRWSPQEQVLAHRSIACFVTHCGWNSSMEAIASGVPVVAFPQWG 352
Query: 222 DQCTDAK 242
DQ T+AK
Sbjct: 351 DQVTNAK 331
Score = 28.6 bits (56), Expect(2) = 2e-030
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3 / -2
Query: 405 GGSSDAHVQAFVDEVSRRA 461
GGSS ++++FVDE+ +R+
Sbjct: 148 GGSSHRNIESFVDEIRKRS 92
>gb|CA921682.1|CA921682 EST639400 MTUS Medicago truncatula cDNA clone MTUS-43B10, mRNA
sequence
Length = 653
Score = 129 bits (276), Expect = 6e-029
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +3 / -2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LPD FL+ RG VV WSPQ VLAHPS ACF+THCGWNS++E ++ GVPV+ FP G
Sbjct: 538 VLPDDFLEETNERGKVVEWSPQVDVLAHPSVACFITHCGWNSSIEALSLGVPVLTFPSRG 359
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AKFLVD G+G+++
Sbjct: 358 DQLTNAKFLVDVFGVGIKM 302
>gb|CA920182.1|CA920182 EST637900 MTUS Medicago truncatula cDNA clone MTUS-24F9, mRNA
sequence
Length = 787
Score = 119 bits (254), Expect(2) = 5e-028
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +3 / -2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
L + FL+ +G VV W PQ +VL HP+ ACFLTHCGWNSTLE I AGVP++ +PQW D
Sbjct: 633 LSEKFLEETKEKGLVVTWCPQTKVLVHPAIACFLTHCGWNSTLEAITAGVPMIGYPQWTD 454
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q T+A + D MG+RL+
Sbjct: 453 QPTNATLVSDVFRMGIRLK 397
Score = 29.0 bits (57), Expect(2) = 5e-028
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 405 GGSSDAHVQAFVDEV 449
GGSSD ++Q FVDE+
Sbjct: 261 GGSSDRNIQRFVDEI 217
>gb|AW127513.2|AW127513 M110722 DSIL Medicago truncatula cDNA clone IL275, mRNA sequence
Length = 432
Score = 119 bits (254), Expect = 7e-026
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +3 / +3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
L + FL+ +G VV W PQ +VL HP+ ACFLTHCGWNSTLE I AGVP++ +PQW D
Sbjct: 93 LSEKFLEETKEKGLVVTWCPQTKVLVHPAIACFLTHCGWNSTLEAITAGVPMIGYPQWTD 272
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q T+A + D MG+RL+
Sbjct: 273 QPTNATLVSDVFRMGIRLK 329
>gb|BG456632.1|BG456632 NF083B07PL1F1059 Phosphate starved leaf Medicago truncatula cDNA
clone NF083B07PL 5', mRNA sequence
Length = 661
Score = 119 bits (254), Expect = 7e-026
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +3 / +3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
L + FL+ +G VV W PQ +VL HP+ ACFLTHCGWNSTLE I AGVP++ +PQW D
Sbjct: 258 LSEKFLEETKEKGLVVTWCPQTKVLVHPAIACFLTHCGWNSTLEAITAGVPMIGYPQWTD 437
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q T+A + D MG+RL+
Sbjct: 438 QPTNATLVSDVFRMGIRLK 494
>emb|CT573077.1| Medicago truncatula chromosome 5 clone mth2-43j18, WORKING DRAFT
SEQUENCE
Length = 142572
Score = 112 bits (239), Expect(2) = 8e-025
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = +3 / -3
Query: 48 PDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQ 227
P GFL+ GRG VV W Q++VL+HP+ ACFL+HCGW+S +E++ AGVPV+ +P W DQ
Sbjct: 80815 PKGFLEETKGRGLVVTWCNQEKVLSHPAVACFLSHCGWSSMIESVTAGVPVIGYPYWLDQ 80636
Query: 228 CTDAKFLVDELGMGVRL 278
T AK +V + GV L
Sbjct: 80635 PTIAKIIVKQFDNGVIL 80585
Score = 22.6 bits (43), Expect(2) = 8e-025
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 4 RPFLWVVRPT 33
+ FLWV++PT
Sbjct: 80878 KSFLWVIKPT 80849
>gb|CG931895.1|CG931895 MBEIL04TR mth2 Medicago truncatula genomic clone 62B8, DNA sequence
Length = 882
Score = 112 bits (239), Expect(2) = 9e-025
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = +3 / +3
Query: 48 PDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQ 227
P GFL+ GRG VV W Q++VL+HP+ ACFL+HCGW+S +E++ AGVPV+ +P W DQ
Sbjct: 366 PKGFLEETKGRGLVVTWCNQEKVLSHPAVACFLSHCGWSSMIESVTAGVPVIGYPYWLDQ 545
Query: 228 CTDAKFLVDELGMGVRL 278
T AK +V + GV L
Sbjct: 546 PTIAKIIVKQFDNGVIL 596
Score = 22.6 bits (43), Expect(2) = 9e-025
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 4 RPFLWVVRPT 33
+ FLWV++PT
Sbjct: 303 KSFLWVIKPT 332
>emb|CR954194.1| Medicago truncatula chromosome 5 clone mte1-1f10, WORKING DRAFT SEQUENCE
Length = 149242
Score = 112 bits (239), Expect = 8e-024
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP G+ DS+ +G +V W Q +LAH + CF+THCGWNSTLE+++ GVPVV PQW D
Sbjct: 133165 LPKGYKDSIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLGVPVVCLPQWAD 132986
Query: 225 QCTDAKFLVDELGMGVR 275
Q DAKFL + +GVR
Sbjct: 132985 QLPDAKFLEEIWEVGVR 132935
Score = 109 bits (233), Expect = 5e-023
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3 / -2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP G+ D + +G +V W Q +LAH + CF+THCGWNSTLE+++ GVPVV PQW D
Sbjct: 125022 LPKGYKDFIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLGVPVVCLPQWAD 124843
Query: 225 QCTDAKFLVDELGMGVR 275
Q DAKFL + +GVR
Sbjct: 124842 QLPDAKFLEEIWEVGVR 124792
>gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete sequence
Length = 124526
Score = 108 bits (230), Expect = 1e-022
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = +3 / -3
Query: 57 FLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTD 236
F D + +G +V W Q VL+H S CFLTHCGWNSTLE++ +GVP+VAFPQW DQ T+
Sbjct: 106680 FKDELEKKGKIVKWCSQVEVLSHSSLGCFLTHCGWNSTLESLVSGVPLVAFPQWTDQKTN 106501
Query: 237 AKFLVDELGMGVRL 278
AK + D +GVR+
Sbjct: 106500 AKLIEDVWKIGVRV 106459
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +3 / -3
Query: 57 FLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTD 236
+ + + +G +V W Q +L+HPS CFLTHCGWNSTLE++ GVP+VAFPQW DQ T+
Sbjct: 113418 YREELEEKGKIVKWCSQMEILSHPSLGCFLTHCGWNSTLESLVKGVPMVAFPQWTDQMTN 113239
Query: 237 AKFLVDELGMGVRL 278
AK + D +GVR+
Sbjct: 113238 AKLIEDVWKIGVRV 113197
Score = 23.1 bits (44), Expect(2) = 1e-023
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / -3
Query: 1 GRPFLWVVRPTPG 39
G PFLWV+R G
Sbjct: 113481 GFPFLWVLREKEG 113443
>gb|BI264148.1|BI264148 NF113F10PL1F1091 Phosphate starved leaf Medicago truncatula cDNA
clone NF113F10PL 5', mRNA sequence
Length = 665
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +3 / -1
Query: 57 FLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTD 236
+ + + +G +V W Q +L+HPS CFLTHCGWNSTLE++ GVP+VAFPQW DQ T+
Sbjct: 332 YREELEEKGKIVKWCSQMEILSHPSLGCFLTHCGWNSTLESLVKGVPMVAFPQWTDQMTN 153
Query: 237 AKFLVDELGMGVRL 278
AK + D +GVR+
Sbjct: 152 AKLIEDVWKIGVRV 111
Score = 23.1 bits (44), Expect(2) = 1e-023
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / -1
Query: 1 GRPFLWVVRPTPG 39
G PFLWV+R G
Sbjct: 395 GFPFLWVLREKEG 357
>emb|CR936325.2| Medicago truncatula chromosome 5 clone mth2-53m2, COMPLETE SEQUENCE
Length = 139736
Score = 111 bits (237), Expect = 1e-023
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3 / +2
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D +LP+GFLD A G V+ W+PQ +VLAHP+T F++HCGWNSTLE+I GVP+ +
Sbjct: 112571 DLVAVLPEGFLDRTARTGRVIGWAPQVQVLAHPATGGFVSHCGWNSTLESIYYGVPIATW 112750
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P + DQ T+A LV EL MGV +
Sbjct: 112751 PLFADQQTNAFQLVSELKMGVEI 112819
>gb|CG931469.1|CG931469 MBEHB82TFB mth2 Medicago truncatula genomic clone 54M20, DNA
sequence
Length = 891
Score = 106 bits (226), Expect(2) = 4e-023
Identities = 39/80 (48%), Positives = 56/80 (70%)
Frame = +3 / -2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GFL+++ RG +V W+PQ++VL HP+ F TH GWNSTLE++ GVP++ P +GD
Sbjct: 245 LPSGFLENLGERGYIVKWAPQEQVLKHPAVGAFWTHNGWNSTLESVCEGVPMICMPSFGD 66
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q +AK+ D +GV+L G
Sbjct: 65 QKINAKYASDVWKVGVQLEG 6
Score = 23.1 bits (44), Expect(2) = 4e-023
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 4 RPFLWVVRP 30
+PFLW +RP
Sbjct: 305 QPFLWAIRP 279
>gb|BG647106.1|BG647106 EST508725 HOGA Medicago truncatula cDNA clone pHOGA-15P15 5' end,
mRNA sequence
Length = 616
Score = 109 bits (233), Expect = 5e-023
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3 / +1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP G+ D + +G +V W Q +LAH + CF+THCGWNSTLE+++ GVPVV PQW D
Sbjct: 268 LPKGYKDFIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLGVPVVCLPQWAD 447
Query: 225 QCTDAKFLVDELGMGVR 275
Q DAKFL + +GVR
Sbjct: 448 QLPDAKFLEEIWEVGVR 498
>gb|AQ917129.1|AQ917129 T233160b Medicago truncatula BAC library Medicago truncatula
genomic clone 52C06, DNA sequence
Length = 515
Score = 109 bits (232), Expect = 7e-023
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = +3 / -2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FL GRG VV W Q++VL HP+ ACFL+HCGWNSTLET+ GVPV+ +P W D
Sbjct: 448 LPKEFLKETEGRGLVVKWCAQEKVLMHPAVACFLSHCGWNSTLETLITGVPVICWPSWLD 269
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+A + + GV++
Sbjct: 268 QPTNAMLIENVFRNGVKV 215
>gb|CG962256.1|CG962256 MBEME57TR mth2 Medicago truncatula genomic clone 1I17, DNA sequence
Length = 900
Score = 109 bits (232), Expect = 7e-023
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FL GRG VV W Q++VL HP+ ACFL+HCGWNSTLET+ GVPV+ +P W D
Sbjct: 448 LPKEFLKETEGRGLVVKWCAQEKVLMHPAVACFLSHCGWNSTLETLITGVPVICWPSWLD 269
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+A + + GV++
Sbjct: 268 QPTNAMLIENVFRNGVKV 215
>gb|BG451009.1|BG451009 NF097G06DT1F1050 Drought Medicago truncatula cDNA clone NF097G06DT
5', mRNA sequence
Length = 660
Score = 109 bits (232), Expect = 7e-023
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP G D + +G +V W Q +LAH + CF+THCGWNSTLE+++ GVPVV PQW D
Sbjct: 600 LPKGXKDXIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSXGVPVVCLPQWAD 421
Query: 225 QCTDAKFLVDELGMGVR 275
Q DAKFL + +GVR
Sbjct: 420 QLPDAKFLEEIWEVGVR 370
>gb|CX522259.1|CX522259 s13dNF67C06VI040_470322 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 548
Score = 109 bits (232), Expect = 7e-023
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = +3 / +1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG +V W Q +L+HPS CFLTHCGWNSTLE++ GVP+VAFPQW DQ T+AK + D
Sbjct: 7 RGKIVKWCSQMEILSHPSLGCFLTHCGWNSTLESLVKGVPMVAFPQWTDQMTNAKLIEDV 186
Query: 258 LGMGVRL 278
+GVR+
Sbjct: 187 WKIGVRV 207
>gb|CA920981.1|CA920981 EST638699 MTUS Medicago truncatula cDNA clone MTUS-34C9, mRNA
sequence
Length = 751
Score = 62.9 bits (131), Expect(3) = 8e-023
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +3 / -2
Query: 162 NSTLETIAAGVPVVAFPQWGDQCTDAKFLVDELGMGVRL 278
+S++E ++ GVP++ FP WGDQ T+AKFLVD G+G+RL
Sbjct: 645 DSSMEALSLGVPMLTFPAWGDQVTNAKFLVDVFGVGIRL 529
Score = 59.7 bits (124), Expect(3) = 8e-023
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3 / -3
Query: 90 VPWSPQDRVLAHPSTACFLTHCGW 161
V WSPQ++VLAHPS ACF+THCGW
Sbjct: 716 VKWSPQEQVLAHPSVACFITHCGW 645
Score = 26.7 bits (52), Expect(3) = 8e-023
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3 / -2
Query: 405 GGSSDAHVQAFVDEVSR 455
GGSSD H+ AF+ ++ +
Sbjct: 384 GGSSDLHLDAFMQDIKK 334
>gb|AJ497543.1|AJ497543 AJ497543 MTFLOW Medicago truncatula cDNA clone mt--abc955110f09,
mRNA sequence
Length = 518
Score = 99.6 bits (211), Expect(2) = 1e-022
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = +3 / +2
Query: 108 DRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDELGMGVRL 278
++VLAH S ACF+THCGWNS++E I GVP++ FP +GDQ T+AKFLVD G G+RL
Sbjct: 20 EQVLAHSSVACFITHCGWNSSMEAITLGVPMLTFPAFGDQLTNAKFLVDVFGAGIRL 190
Score = 29.9 bits (59), Expect(2) = 1e-022
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 405 GGSSDAHVQAFVDEVSRRACG 467
GGSSD H+ AF+ ++ + G
Sbjct: 329 GGSSDRHLDAFIQDIKKHGTG 391
>gb|CX518878.1|CX518878 s13dNF38C09VI070_438976 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 300
Score = 107 bits (229), Expect = 2e-022
Identities = 39/67 (58%), Positives = 50/67 (74%)
Frame = +3 / +2
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G +V W Q +L+HPS CFLTHCGWNSTLE++ GVP+VAFPQW DQ T+AK + D
Sbjct: 23 KGKIVKWCSQMEILSHPSLGCFLTHCGWNSTLESLVKGVPMVAFPQWTDQMTNAKLIEDV 202
Query: 258 LGMGVRL 278
+GVR+
Sbjct: 203 WKIGVRV 223
>gb|AC162276.2| Medicago truncatula chromosome 7 clone mth2-145k10, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 124138
Score = 107 bits (228), Expect = 3e-022
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = +3 / +2
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G VV W Q +VLAH S CF+THCGWNSTLE I+ GVP+VA PQW DQ T+AKF+ D
Sbjct: 110675 KGFVVTWCSQLKVLAHESIGCFVTHCGWNSTLEAISLGVPIVAMPQWSDQSTNAKFIEDV 110854
Query: 258 LGMGVRL 278
+G+R+
Sbjct: 110855 WKIGIRV 110875
Score = 102 bits (217), Expect = 8e-021
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = +3 / +3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+ VV W Q +VLAH + CF+THCGWNSTLE ++ GVP +A PQW DQ T+AKF+ D
Sbjct: 119151 KSLVVTWCSQLKVLAHEAIGCFVTHCGWNSTLEALSLGVPTIAIPQWSDQRTNAKFIADV 119330
Query: 258 LGMGVR 275
MG+R
Sbjct: 119331 WKMGIR 119348
>gb|BG648787.1|BG648787 EST510406 HOGA Medicago truncatula cDNA clone pHOGA-23H18 5' end,
mRNA sequence
Length = 758
Score = 101 bits (215), Expect(2) = 1e-021
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +3 / +2
Query: 57 FLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTD 236
+ + + +G +V W Q +L+HPS CFLTHCGWNSTLE++ GVP+VAFPQW DQ T+
Sbjct: 467 YREELEEKGKIVKWCSQMEILSHPSLGCFLTHCGWNSTLESLVKGVPMVAFPQWTDQMTN 646
Query: 237 AKFL 248
AK +
Sbjct: 647 AKLI 658
Score = 23.1 bits (44), Expect(2) = 1e-021
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +2
Query: 1 GRPFLWVVRPTPG 39
G PFLWV+R G
Sbjct: 404 GFPFLWVLREKEG 442
>gb|AW776615.1|AW776615 EST335680 DSIL Medicago truncatula cDNA clone pDSIL-11A11, mRNA
sequence
Length = 708
Score = 100 bits (214), Expect(2) = 1e-021
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +3 / -2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F + ++ RG + W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +
Sbjct: 563 ILSSDFANEISDRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 384
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ TD +F+ +E +G+ +
Sbjct: 383 DQPTDCRFICNEWKIGMEI 327
Score = 23.5 bits (45), Expect(2) = 1e-021
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 4 RPFLWVVRP 30
+PFLW+ RP
Sbjct: 614 KPFLWITRP 588
>gb|BF520967.1|BF520967 EST458449 DSIL Medicago truncatula cDNA clone pDSIL-41A5, mRNA
sequence
Length = 389
Score = 105 bits (223), Expect = 1e-021
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +3 / +3
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D +LP+GFLD G G V+ W+ Q ++LAHP+T F++HCGWNSTLE+I GVP+ A+
Sbjct: 33 DLESVLPEGFLDRTTGIGRVIGWAQQAQILAHPATGGFVSHCGWNSTLESIYFGVPIAAW 212
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P + +Q +A LV EL +GV +
Sbjct: 213 PLYAEQQANAFELVCELKIGVEI 281
>gb|CX520110.1|CX520110 s13dNF54H04VI042_444272 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 581
Score = 105 bits (223), Expect = 1e-021
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +3 / +3
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D +LP+GFLD G G V+ W+ Q ++LAHP+T F++HCGWNSTLE+I GVP+ A+
Sbjct: 126 DLESVLPEGFLDRTTGIGRVIGWAQQAQILAHPATGGFVSHCGWNSTLESIYFGVPIAAW 305
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P + +Q +A LV EL +GV +
Sbjct: 306 PLYAEQQANAFELVCELKIGVEI 374
>gb|AC151740.21| Medicago truncatula clone mth2-82n16, complete sequence
Length = 131700
Score = 102 bits (217), Expect = 8e-021
Identities = 37/74 (50%), Positives = 52/74 (70%)
Frame = +3 / -1
Query: 57 FLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTD 236
F + +A RG + W PQD+VL HPS FLTHCGWNST E+I AGVP++ +P + DQ TD
Sbjct: 110028 FTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTD 109849
Query: 237 AKFLVDELGMGVRL 278
+F+ +E +G+ +
Sbjct: 109848 CRFICNEWEIGMEI 109807
Score = 98.7 bits (209), Expect(2) = 2e-021
Identities = 35/79 (44%), Positives = 55/79 (69%)
Frame = +3 / -2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F++ ++ RG + W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +G
Sbjct: 56732 VLSSEFVNEISDRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFG 56553
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+ + + +E +G+ +
Sbjct: 56552 DQPTNCRLIYNEWEIGMEI 56496
Score = 98.2 bits (208), Expect(2) = 3e-021
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +3 / -3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F + ++ RG + W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +
Sbjct: 94810 ILSSEFTNEISDRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 94631
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+ +F+ +E +G+ +
Sbjct: 94630 DQPTNCRFICNEWEIGMEI 94574
Score = 97.3 bits (206), Expect(2) = 5e-021
Identities = 33/74 (44%), Positives = 53/74 (71%)
Frame = +3 / -3
Query: 57 FLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTD 236
F + ++ RG + W PQ++VL HPS FLTHCGWNST+E+I AGVP++ +P + DQ T+
Sbjct: 118957 FENEISDRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTIESICAGVPMLCWPNFADQPTN 118778
Query: 237 AKFLVDELGMGVRL 278
+++ +E +G+ +
Sbjct: 118777 CRYICNEWEIGMEI 118736
Score = 96.8 bits (205), Expect(2) = 7e-021
Identities = 33/79 (41%), Positives = 54/79 (68%)
Frame = +3 / -1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F++ + RG + W PQ++VL HPS FLTHCGWNST+E+I AGVP++ +P +
Sbjct: 9342 ILSSDFVNETSDRGVIASWCPQEKVLNHPSVGGFLTHCGWNSTMESICAGVPMLCWPFFA 9163
Query: 222 DQCTDAKFLVDELGMGVRL 278
+Q T+ +++ +E +G +
Sbjct: 9162 EQPTNCRYICNEWEIGAEI 9106
Score = 24.9 bits (48), Expect(2) = 7e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 9393 KPFLWIIRP 9367
Score = 24.9 bits (48), Expect(2) = 2e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -2
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 56783 KPFLWIIRP 56757
Score = 24.9 bits (48), Expect(2) = 3e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 94861 KPFLWIIRP 94835
Score = 24.9 bits (48), Expect(2) = 5e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 119023 KPFLWIIRP 118997
>gb|CG938499.1|CG938499 MBEDS05TRD mth2 Medicago truncatula genomic clone 34B9, DNA
sequence
Length = 919
Score = 100 bits (213), Expect(2) = 2e-021
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +3 / +1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FLD V RG + W QD+VL+HPS FLTHCGWNSTLETI+ GVP + +P + +
Sbjct: 430 LPQEFLDEVKDRGYITSWCYQDQVLSHPSVGGFLTHCGWNSTLETISYGVPTICWPFFAE 609
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+ ++L + +G+ +
Sbjct: 610 QQTNCRYLCNTWKIGMEI 663
Score = 23.1 bits (44), Expect(2) = 2e-021
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 376 PFLWIMRP 399
>gb|CG923030.1|CG923030 MBEIN84TR mth2 Medicago truncatula genomic clone 63M24, DNA
sequence
Length = 906
Score = 100 bits (213), Expect(2) = 2e-021
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +3 / +2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FLD V RG + W QD+VL+HPS FLTHCGWNSTLETI+ GVP + +P + +
Sbjct: 428 LPQEFLDEVKDRGYITSWCYQDQVLSHPSVGGFLTHCGWNSTLETISYGVPTICWPFFAE 607
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+ ++L + +G+ +
Sbjct: 608 QQTNCRYLCNTWKIGMEI 661
Score = 23.1 bits (44), Expect(2) = 2e-021
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 374 PFLWIMRP 397
>gb|CG975026.1|CG975026 MBEHF85TF mth2 Medicago truncatula genomic clone 55O2, DNA sequence
Length = 871
Score = 100 bits (213), Expect(2) = 2e-021
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +3 / +3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FLD V +G + W QD VLAHPS FLTHCGWNSTLETI+ GVP + +P + +
Sbjct: 585 LPQEFLDEVKDKGYITSWCSQDEVLAHPSVGGFLTHCGWNSTLETISYGVPTICWPFFAE 764
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+ ++L +G+ +
Sbjct: 765 QQTNCRYLCKSWKIGMEI 818
Score = 23.1 bits (44), Expect(2) = 2e-021
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 531 PFLWILRP 554
>gb|CG947188.1|CG947188 MBEMV63TR mth2 Medicago truncatula genomic clone 5K6, DNA sequence
Length = 792
Score = 100 bits (213), Expect(2) = 2e-021
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FLD V +G + W QD VLAHPS FLTHCGWNSTLETI+ GVP + +P + +
Sbjct: 532 LPQEFLDEVKDKGYITSWCSQDEVLAHPSVGGFLTHCGWNSTLETISYGVPTICWPFFAE 353
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+ ++L +G+ +
Sbjct: 352 QQTNCRYLCKSWKIGMEI 299
Score = 23.1 bits (44), Expect(2) = 2e-021
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / -3
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 586 PFLWILRP 563
>gb|CX527318.1|CX527318 s13dNF42C11AT086_515148 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 606
Score = 100 bits (213), Expect(2) = 2e-021
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FLD V RG + W QD+VL+HPS FLTHCGWNSTLETI+ GVP + +P + +
Sbjct: 531 LPQEFLDEVKDRGYITSWCYQDQVLSHPSVGGFLTHCGWNSTLETISYGVPTICWPFFAE 352
Query: 225 QCTDAKFLVDELGMGVRL 278
Q T+ ++L + +G+ +
Sbjct: 351 QQTNCRYLCNTWKIGMEI 298
Score = 23.1 bits (44), Expect(2) = 2e-021
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / -1
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 585 PFLWIMRP 562
>gb|CG945776.1|CG945776 MBEKG06TRB mth2 Medicago truncatula genomic clone 73B11, DNA
sequence
Length = 927
Score = 98.2 bits (208), Expect(2) = 3e-021
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +3 / +1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F + ++ RG + W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +G
Sbjct: 649 ILSSEFENEISDRGLITSWCPQEQVLIHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFG 828
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+ +F+ E +G+ +
Sbjct: 829 DQPTNCRFIWHEWEIGLEI 885
Score = 24.9 bits (48), Expect(2) = 3e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 598 KPFLWIIRP 624
>gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKING DRAFT SEQUENCE, 7 ordered
pieces
Length = 137420
Score = 97.7 bits (207), Expect(2) = 4e-021
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +3 / -3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F + ++ R + W Q++VL HPS FLTHCGWNST E+I AGVP++ +P +G
Sbjct: 115041 VLSSEFANEISDRSLIASWCSQEKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFG 114862
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+ +F+ +EL +G+ +
Sbjct: 114861 DQPTNCRFICNELEIGIEI 114805
Score = 97.3 bits (206), Expect(2) = 5e-021
Identities = 34/79 (43%), Positives = 55/79 (69%)
Frame = +3 / -3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F++ ++ RG + W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +G
Sbjct: 72198 ILSSEFVNEISDRGLIASWCPQEQVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFG 72019
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ + +F+ ++ +G+ +
Sbjct: 72018 DQPANCRFICNKWEIGLEI 71962
Score = 97.3 bits (206), Expect(2) = 7e-021
Identities = 34/73 (46%), Positives = 53/73 (72%)
Frame = +3 / -2
Query: 60 LDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDA 239
++ ++ RG +V W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +GDQ +
Sbjct: 78967 VNGISDRGLIVNWCPQEQVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFGDQLANC 78788
Query: 240 KFLVDELGMGVRL 278
+F+ +E +G+ +
Sbjct: 78787 RFICNEWEIGLEI 78749
Score = 96.8 bits (205), Expect(2) = 7e-021
Identities = 33/79 (41%), Positives = 54/79 (68%)
Frame = +3 / -2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F++ + RG + W PQ++VL HPS FLTHCGWNST+E+I AGVP++ +P +
Sbjct: 125506 ILSSDFVNETSDRGVIASWCPQEKVLNHPSVGGFLTHCGWNSTMESICAGVPMLCWPFFA 125327
Query: 222 DQCTDAKFLVDELGMGVRL 278
+Q T+ +++ +E +G +
Sbjct: 125326 EQPTNCRYICNEWEIGAEI 125270
Score = 24.9 bits (48), Expect(2) = 5e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 72249 KPFLWIIRP 72223
Score = 24.9 bits (48), Expect(2) = 4e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 115092 KPFLWIIRP 115066
Score = 24.9 bits (48), Expect(2) = 7e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -2
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 125557 KPFLWIIRP 125531
Score = 24.4 bits (47), Expect(2) = 7e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -2
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 79036 QPFLWIIRP 79010
>gb|BE318556.2|BE318556 NF040H08LF1F1073 Developing leaf Medicago truncatula cDNA clone
NF040H08LF 5', mRNA sequence
Length = 442
Score = 103 bits (219), Expect = 4e-021
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = +3 / +2
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G +V W Q VL+H S +CF+THCGWNSTLE++ +GVP+VAFPQW DQ T+AK + D
Sbjct: 224 GKIVKWCSQVEVLSHRSLSCFMTHCGWNSTLESLGSGVPMVAFPQWTDQTTNAKLIEDVW 403
Query: 261 GMGVRL 278
GVR+
Sbjct: 404 KTGVRM 421
>emb|CR305941.1| mte1-26C3FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 710
Score = 97.3 bits (206), Expect(2) = 6e-021
Identities = 33/74 (44%), Positives = 53/74 (71%)
Frame = +3 / +2
Query: 57 FLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTD 236
F + ++ RG + W PQ++VL HPS FLTHCGWNST+E+I AGVP++ +P + DQ T+
Sbjct: 185 FENEISDRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTIESICAGVPMLCWPNFADQPTN 364
Query: 237 AKFLVDELGMGVRL 278
+++ +E +G+ +
Sbjct: 365 CRYICNEWEIGMEI 406
Score = 24.9 bits (48), Expect(2) = 6e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 119 KPFLWIIRP 145
>emb|CR331527.1| mte1-60P1FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 669
Score = 97.3 bits (206), Expect(2) = 6e-021
Identities = 34/79 (43%), Positives = 55/79 (69%)
Frame = +3 / -3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F++ ++ RG + W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +G
Sbjct: 331 ILSSEFVNEISDRGLIASWCPQEQVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFG 152
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ + +F+ ++ +G+ +
Sbjct: 151 DQPANCRFICNKWEIGLEI 95
Score = 24.9 bits (48), Expect(2) = 6e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 382 KPFLWIIRP 356
>gb|AL381439.1|AL381439 MtBC01A09F3 MtBC Medicago truncatula cDNA clone MtBC01A09 T3, mRNA
sequence
Length = 505
Score = 97.3 bits (206), Expect(2) = 6e-021
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = +3 / +1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F + ++ RG + W PQ++VL HPS FLTHCGWNST E+I AGVP++ +P +G
Sbjct: 280 ILSSEFENEISDRGLITSWCPQEQVLIHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFG 459
Query: 222 DQCTDAKFLVDE 257
DQ T+ +F+ +E
Sbjct: 460 DQPTNCRFICNE 495
Score = 24.9 bits (48), Expect(2) = 6e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 229 KPFLWIIRP 255
>gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete sequence
Length = 106753
Score = 102 bits (218), Expect = 6e-021
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +3 / +3
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G +V W Q VL+H S CF+THCGWNSTLE++ +GVP+VAFPQW DQ T+AK + D
Sbjct: 32382 GKIVKWCSQVEVLSHRSLGCFMTHCGWNSTLESLGSGVPMVAFPQWTDQTTNAKLIEDVW 32561
Query: 261 GMGVRL 278
GVR+
Sbjct: 32562 KTGVRM 32579
>gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING DRAFT SEQUENCE, 13 ordered
pieces
Length = 127651
Score = 102 bits (218), Expect = 6e-021
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +3 / +1
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G +V W Q VL+H S CF+THCGWNSTLE++ +GVP+VAFPQW DQ T+AK + D
Sbjct: 31660 GKIVKWCSQVEVLSHRSLGCFMTHCGWNSTLESLGSGVPMVAFPQWTDQTTNAKLIEDVW 31839
Query: 261 GMGVRL 278
GVR+
Sbjct: 31840 KTGVRM 31857
>gb|CA916825.1|CA916825 EST640972 GPOD Medicago truncatula cDNA clone GPOD-34E5, mRNA
sequence
Length = 736
Score = 96.8 bits (205), Expect(2) = 8e-021
Identities = 33/79 (41%), Positives = 54/79 (68%)
Frame = +3 / +1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+L F++ + RG + W PQ++VL HPS FLTHCGWNST+E+I AGVP++ +P +
Sbjct: 430 ILSSDFVNETSDRGVIASWCPQEKVLNHPSVGGFLTHCGWNSTMESICAGVPMLCWPFFA 609
Query: 222 DQCTDAKFLVDELGMGVRL 278
+Q T+ +++ +E +G +
Sbjct: 610 EQPTNCRYICNEWEIGAEI 666
Score = 24.9 bits (48), Expect(2) = 8e-021
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 4 RPFLWVVRP 30
+PFLW++RP
Sbjct: 379 KPFLWIIRP 405
>gb|AC171534.4| Medicago truncatula chromosome 7 BAC clone mth2-90a20, complete
sequence
Length = 88903
Score = 102 bits (217), Expect = 8e-021
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = +3 / +3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+ VV W Q +VLAH + CF+THCGWNSTLE ++ GVP +A PQW DQ T+AKF+ D
Sbjct: 12420 KSLVVTWCSQLKVLAHEAIGCFVTHCGWNSTLEALSLGVPTIAIPQWSDQRTNAKFIADV 12599
Query: 258 LGMGVR 275
MG+R
Sbjct: 12600 WKMGIR 12617
Score = 102 bits (217), Expect = 8e-021
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = +3 / +3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+ VV W Q +VLAH + CF+THCGWNSTLE ++ GVP +A PQW DQ T+AKF+ D
Sbjct: 7911 KSLVVTWCSQLKVLAHEAIGCFVTHCGWNSTLEALSLGVPTIAIPQWSDQRTNAKFIADV 8090
Query: 258 LGMGVR 275
MG+R
Sbjct: 8091 WKMGIR 8108
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 609,103,210
Number of Sequences: 392609
Number of extensions: 7439265
Number of successful extensions: 41754
Number of sequences better than 1.0e-020: 57
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 26847253785
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)