TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716394.2.1
(1074 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE998812.1|BE998812 EST430479 GVSN Medicago truncatula c... 249 5e-087
gb|BG581844.1|BG581844 EST483580 GVN Medicago truncatula cD... 220 4e-078
gb|CX518310.1|CX518310 s13dNF30D11VI092_422333 Virus-Infect... 283 4e-075
gb|CX516872.1|CX516872 s13dNF09E10VI083_398215 Virus-Infect... 261 2e-068
gb|DW016612.1|DW016612 EST1225573 MTY Medicago truncatula c... 132 2e-063
gb|CX529106.1|CX529106 s13dNF42A06MJ037_244270 Methyl Jasmo... 158 2e-061
gb|DW018695.1|DW018695 EST1227656 MTY Medicago truncatula c... 132 7e-060
gb|AW775007.1|AW775007 EST334158 KV3 Medicago truncatula cD... 125 8e-057
gb|BI271257.1|BI271257 NF053C09FL1F1070 Developing flower M... 127 2e-051
gb|CX528879.1|CX528879 s13dNF01E07MJ051_243825 Methyl Jasmo... 122 5e-050
emb|CR962123.1| Medicago truncatula chromosome 5 clone mth2... 73 1e-049
gb|BI271777.1|BI271777 NF012H03FL1F1031 Developing flower M... 107 2e-045
gb|AC175090.3| Medicago truncatula clone mth2-156c19, WORKI... 65 1e-040
gb|AC154089.3| Medicago truncatula clone mth2-91j8, WORKING... 60 1e-036
gb|CA922214.1|CA922214 EST639932 MTUS Medicago truncatula c... 154 3e-036
gb|BI272246.1|BI272246 NF022F11FL1F1094 Developing flower M... 65 1e-032
gb|AJ503274.1|AJ503274 AJ503274 MTAMP Medicago truncatula c... 99 5e-025
>gb|BE998812.1|BE998812 EST430479 GVSN Medicago truncatula cDNA clone pGVSN-13A11, mRNA
sequence
Length = 795
Score = 249 bits (539), Expect(2) = 5e-087
Identities = 92/174 (52%), Positives = 122/174 (70%)
Frame = -2 / +3
Query: 779 PQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTSYNLTESLMFLAHFVGDVH 600
P++C F+Y RDC + G + CVVGAINNYT QL YG+ T YNLT++L+FL+HF+GDVH
Sbjct: 270 PKLCTFQYDRDCKDLNGVKDRCVVGAINNYTTQLLDYGKDTKYNLTQALLFLSHFMGDVH 449
Query: 599 QPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLT 420
QPLH GF D+GGN I VHW+ RK NLHHVWD +II+TA + FY+ ++D + A++ N+T
Sbjct: 450 QPLHTGFTTDKGGNLIDVHWFTRKQNLHHVWDANIIETAEERFYDTNIDKYISAIQENIT 629
Query: 419 DGWSDDIVHWENCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSR 258
WSD++ WE C + TC + YA E I +C +AYKD +D L YF SR
Sbjct: 630 KTWSDEVAGWEACSSNKTTCPDIYASEGIKAACQWAYKDAPEDSVLER*YFLSR 791
Score = 111 bits (236), Expect(2) = 1e-028
Identities = 68/139 (48%), Positives = 74/139 (53%)
Frame = +1 / -3
Query: 364 VACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLRYQ 543
V L LQ S SSDH V F A +SML+ * AVSIML S T WRF FL Q
Sbjct: 685 VVLLELQASHPATSSDHVFVIFS*IALMYLSMLVS*NLSSAVSIMLASQTWWRFCFLVNQ 506
Query: 544 WTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLYEVFWP*L*SWSV*LLIAPTTHIP 723
T + PP S P C G WTSP K R VRLY V P* S V*LLIAPTTH+
Sbjct: 505 *TSIKFPPLSVVNPVCRG*WTSPIK*ERKRSACVRLYLVSLP*SRS*VV*LLIAPTTHLS 326
Query: 724 CWPRELWQSREYLKLQTWG 780
P QS Y K+Q+ G
Sbjct: 325 FTPFRSLQSLSYWKVQSLG 269
Score = 94.1 bits (199), Expect(2) = 5e-087
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = -2 / +3
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHYA 786
WG +GH + CKIA+ LS+ AAAAV+ LLP+ A +LS+VC WAD+V+++ W+S LH+A
Sbjct: 81 WGTDGHAITCKIAQSRLSDTAAAAVKKLLPDYAQNDLSSVCSWADRVKFYLKWSSALHFA 260
Query: 785 NTP 777
+TP
Sbjct: 261 DTP 269
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = +1 / -3
Query: 826 TWSAHGHTVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPH 966
T SAH HT+ TAAAA S R AILQ M PS PH
Sbjct: 220 TRSAHEHTLDKSFCA*SGSNFFTAAAAVSLRRD*AILQVMACPSVPH 80
>gb|BG581844.1|BG581844 EST483580 GVN Medicago truncatula cDNA clone pGVN-66C17 5' end,
mRNA sequence
Length = 793
Score = 220 bits (474), Expect(2) = 4e-078
Identities = 78/144 (54%), Positives = 105/144 (72%)
Frame = -2 / +2
Query: 779 PQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTSYNLTESLMFLAHFVGDVH 600
P++C F+Y RDC + G + CVVGAINNYT QL YG+ T YNLT++L+FL+HF+GDVH
Sbjct: 257 PKLCTFQYDRDCKDLNGVKDRCVVGAINNYTTQLLDYGKDTKYNLTQALLFLSHFMGDVH 436
Query: 599 QPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLT 420
QPLH GF D+GGN I VHW+ RK NLHHVWD +II+TA + FY+ ++D + A++ N+T
Sbjct: 437 QPLHTGFTTDKGGNLIDVHWFTRKQNLHHVWDANIIETAEERFYDTNIDKYISAIQENIT 616
Query: 419 DGWSDDIVHWENCKNKHATCANDY 348
WSD++ WE C + TC + Y
Sbjct: 617 KTWSDEVAGWEACSSNKTTCPDMY 688
Score = 111 bits (236), Expect(2) = 1e-028
Identities = 68/139 (48%), Positives = 74/139 (53%)
Frame = +1 / -2
Query: 364 VACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLRYQ 543
V L LQ S SSDH V F A +SML+ * AVSIML S T WRF FL Q
Sbjct: 672 VVLLELQASHPATSSDHVFVIFS*IALMYLSMLVS*NLSSAVSIMLASQTWWRFCFLVNQ 493
Query: 544 WTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLYEVFWP*L*SWSV*LLIAPTTHIP 723
T + PP S P C G WTSP K R VRLY V P* S V*LLIAPTTH+
Sbjct: 492 *TSIKFPPLSVVNPVCRG*WTSPIK*ERKRSACVRLYLVSLP*SRS*VV*LLIAPTTHLS 313
Query: 724 CWPRELWQSREYLKLQTWG 780
P QS Y K+Q+ G
Sbjct: 312 FTPFRSLQSLSYWKVQSLG 256
Score = 94.1 bits (199), Expect(2) = 4e-078
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = -2 / +2
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHYA 786
WG +GH + CKIA+ LS+ AAAAV+ LLP+ A +LS+VC WAD+V+++ W+S LH+A
Sbjct: 68 WGTDGHAITCKIAQSRLSDTAAAAVKKLLPDYAQNDLSSVCSWADRVKFYLKWSSALHFA 247
Query: 785 NTP 777
+TP
Sbjct: 248 DTP 256
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = +1 / -2
Query: 826 TWSAHGHTVXXXXXXXXXXXXCTAAAAFSDRYFSAILQTMMWPSFPH 966
T SAH HT+ TAAAA S R AILQ M PS PH
Sbjct: 207 TRSAHEHTLDKSFCA*SGSNFFTAAAAVSLRRD*AILQVMACPSVPH 67
>gb|CX518310.1|CX518310 s13dNF30D11VI092_422333 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 628
Score = 283 bits (612), Expect = 4e-075
Identities = 107/192 (55%), Positives = 137/192 (71%)
Frame = -2 / +2
Query: 764 FKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTSYNLTESLMFLAHFVGDVHQPLHV 585
F+Y RDC + G + CVVGAINNYT QL YG+ T YNLT++L+FL+HF+GDVHQPLH
Sbjct: 14 FQYDRDCKDLNGVKDRCVVGAINNYTTQLLDYGKDTKYNLTQALLFLSHFMGDVHQPLHT 193
Query: 584 GFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSD 405
GF D+GGN I VHW+ RK NLHHVWD +II+TA + FY+ ++D + A++ N+T WSD
Sbjct: 194 GFTTDKGGNLIDVHWFTRKQNLHHVWDANIIETAEERFYDTNIDKYISAIQENITKTWSD 373
Query: 404 DIVHWENCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQA 225
++ WE C + TC + YA E I +C +AYKD +D L DDYF SR PIV RLA+
Sbjct: 374 EVAGWEACSSNKTTCPDIYASEGIKAACQWAYKDAPEDSVLEDDYFLSRLPIVSLRLAEG 553
Query: 224 GIRLALVLNRIF 189
G+RLA LNRIF
Sbjct: 554 GVRLAATLNRIF 589
Score = 106 bits (226), Expect(2) = 2e-024
Identities = 66/135 (48%), Positives = 71/135 (52%)
Frame = +1 / -2
Query: 364 VACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLRYQ 543
V L LQ S SSDH V F A +SML+ * AVSIML S T WRF FL Q
Sbjct: 414 VVLLELQASHPATSSDHVFVIFS*IALMYLSMLVS*NLSSAVSIMLASQTWWRFCFLVNQ 235
Query: 544 WTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLYEVFWP*L*SWSV*LLIAPTTHIP 723
T + PP S P C G WTSP K R VRLY V P* S V*LLIAPTTH+
Sbjct: 234 *TSIKFPPLSVVNPVCRG*WTSPIK*ERKRSACVRLYLVSLP*SRS*VV*LLIAPTTHLS 55
Query: 724 CWPRELWQSREYLKL 768
P QS Y K+
Sbjct: 54 FTPFRSLQSLSYWKV 10
Score = 28.1 bits (55), Expect(2) = 2e-024
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = +1 / -2
Query: 193 IRLSTNANLIPACANLFSTIGYLLKK*SSPRVMSCSTSL 309
IRL AN P AN TIG +K*SS S SL
Sbjct: 585 IRLRVAANRTPPSANRKLTIGKRDRK*SSSSTESSGASL 469
>gb|CX516872.1|CX516872 s13dNF09E10VI083_398215 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 548
Score = 261 bits (564), Expect = 2e-068
Identities = 98/178 (55%), Positives = 126/178 (70%)
Frame = -2 / +2
Query: 764 FKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTSYNLTESLMFLAHFVGDVHQPLHV 585
F+Y RDC + G + CVVGAINNYT QL YG+ T YNLT++L+FL+HF+GDVHQPLH
Sbjct: 14 FQYDRDCKDLNGVKDRCVVGAINNYTTQLLDYGKDTKYNLTQALLFLSHFMGDVHQPLHT 193
Query: 584 GFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSD 405
GF D+GGN I VHW+ RK NLHHVWD +II+TA + FY+ ++D + A++ N+T WSD
Sbjct: 194 GFTTDKGGNLIDVHWFTRKQNLHHVWDANIIETAEERFYDTNIDKYISAIQENITKTWSD 373
Query: 404 DIVHWENCKNKHATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLA 231
++ WE C + TC + YA E I +C +AYKD +D L DDYF SR PIV RLA
Sbjct: 374 EVAGWEACSSNKTTCPDIYASEGIKAACQWAYKDAPEDSVLEDDYFLSRLPIVSLRLA 547
Score = 106 bits (226), Expect = 7e-022
Identities = 66/135 (48%), Positives = 71/135 (52%)
Frame = +1 / -3
Query: 364 VACLFLQFSQWTMSSDHPSVRFILRASTMVSMLLL*KSLIAVSIMLTSHT*WRFAFLRYQ 543
V L LQ S SSDH V F A +SML+ * AVSIML S T WRF FL Q
Sbjct: 414 VVLLELQASHPATSSDHVFVIFS*IALMYLSMLVS*NLSSAVSIMLASQTWWRFCFLVNQ 235
Query: 544 WTVMVLPPSSSSKPTCSGWWTSPTKCARNIRLSVRLYEVFWP*L*SWSV*LLIAPTTHIP 723
T + PP S P C G WTSP K R VRLY V P* S V*LLIAPTTH+
Sbjct: 234 *TSIKFPPLSVVNPVCRG*WTSPIK*ERKRSACVRLYLVSLP*SRS*VV*LLIAPTTHLS 55
Query: 724 CWPRELWQSREYLKL 768
P QS Y K+
Sbjct: 54 FTPFRSLQSLSYWKV 10
>gb|DW016612.1|DW016612 EST1225573 MTY Medicago truncatula cDNA clone MTYAJ45, mRNA
sequence
Length = 835
Score = 132 bits (283), Expect(7) = 2e-063
Identities = 47/86 (54%), Positives = 67/86 (77%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YN+TE+L+FL+HF+GD+HQP+HVGF D+GGNTI + WYR K+NLHHVWD II TA+ D
Sbjct: 442 YNMTEALLFLSHFMGDIHQPMHVGFTSDKGGNTIDLRWYRHKSNLHHVWDREIILTALAD 621
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIV 396
+Y+K + +++ ++ N T+G D V
Sbjct: 622 YYDKDVTLLLQDIEKNYTNGIWSDDV 699
Score = 64.3 bits (134), Expect(7) = 2e-063
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2 / +1
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
W KEGH M C IA+ L +A+ AV LLP G LS +C W DQ+R Y +
Sbjct: 127 WSKEGHEMTCLIAQALLKPEASEAVHHLLPPHVNGNLSALCVWPDQIRHWYKY 285
Score = 40.0 bits (81), Expect(7) = 2e-063
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -2 / +1
Query: 368 ATCANDYAIESIHYSCNYAYKDVEQDITLGDDYFFS 261
++C N++A ESI +C + Y+ V+ +TL + YF S
Sbjct: 727 SSCVNNWAKESIQIACKWGYEGVKSGMTLSEKYFDS 834
Score = 33.6 bits (67), Expect(7) = 2e-063
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 725 QGMCVVGAINNYTDQLYSYGQKTS 654
+ MCV GAI N+T QL Y + TS
Sbjct: 361 EDMCVAGAIKNFTSQLSHYKEGTS 432
Score = 30.9 bits (61), Expect(7) = 2e-063
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 413 WSDDIVHWENCKN 375
WSDD+ WE+CK+
Sbjct: 685 WSDDVASWEHCKD 723
Score = 29.0 bits (57), Expect(7) = 2e-063
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 277 YKYRWTSPLHFIDTP 321
Score = 24.4 bits (47), Expect(7) = 2e-063
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 770 CNFKYSRDC 744
C F+YSRDC
Sbjct: 331 CGFQYSRDC 357
>gb|CX529106.1|CX529106 s13dNF42A06MJ037_244270 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 575
Score = 158 bits (339), Expect(3) = 2e-061
Identities = 57/90 (63%), Positives = 70/90 (77%)
Frame = -2 / +2
Query: 779 PQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKTSYNLTESLMFLAHFVGDVH 600
P++C F+Y RDC + G + CVVGAINNYT QL YG+ T YNLT++L+FL+HF+GDVH
Sbjct: 251 PKLCTFQYDRDCKDLNGVKDRCVVGAINNYTTQLLDYGKDTKYNLTQALLFLSHFMGDVH 430
Query: 599 QPLHVGFEDDEGGNTITVHWYRRKANLHHV 510
QPLH GF D+GGN I VHW+ RK NLHHV
Sbjct: 431 QPLHTGFTTDKGGNLIDVHWFTRKQNLHHV 520
Score = 94.1 bits (199), Expect(3) = 2e-061
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = -2 / +2
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHYA 786
WG +GH + CKIA+ LS+ AAAAV+ LLP+ A +LS+VC WAD+V+++ W+S LH+A
Sbjct: 62 WGTDGHAITCKIAQSRLSDTAAAAVKKLLPDYAQNDLSSVCSWADRVKFYLKWSSALHFA 241
Query: 785 NTP 777
+TP
Sbjct: 242 DTP 250
Score = 24.9 bits (48), Expect(3) = 2e-061
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2 / +3
Query: 509 WDVSIIDTAIKDFYNKSM 456
WD +II+TA + FY+ ++
Sbjct: 522 WDANIIETAEERFYDTNI 575
>gb|DW018695.1|DW018695 EST1227656 MTY Medicago truncatula cDNA clone MTYB978, mRNA
sequence
Length = 899
Score = 132 bits (283), Expect(7) = 7e-060
Identities = 47/86 (54%), Positives = 67/86 (77%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YN+TE+L+FL+HF+GD+HQP+HVGF D+GGNTI + WYR K+NLHHVWD II TA+ D
Sbjct: 450 YNMTEALLFLSHFMGDIHQPMHVGFTSDKGGNTIDLRWYRHKSNLHHVWDREIILTALAD 629
Query: 473 FYNKSMDTMVEALKMNLTDGWSDDIV 396
+Y+K + +++ ++ N T+G D V
Sbjct: 630 YYDKDVTLLLQDIEKNYTNGIWSDDV 707
Score = 64.3 bits (134), Expect(7) = 7e-060
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2 / +3
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
W KEGH M C IA+ L +A+ AV LLP G LS +C W DQ+R Y +
Sbjct: 135 WSKEGHEMTCLIAQALLKPEASEAVHHLLPPHVNGNLSALCVWPDQIRHWYKY 293
Score = 33.6 bits (67), Expect(7) = 7e-060
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 725 QGMCVVGAINNYTDQLYSYGQKTS 654
+ MCV GAI N+T QL Y + TS
Sbjct: 369 EDMCVAGAIKNFTSQLSHYKEGTS 440
Score = 30.9 bits (61), Expect(7) = 7e-060
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 413 WSDDIVHWENCKN 375
WSDD+ WE+CK+
Sbjct: 693 WSDDVASWEHCKD 731
Score = 29.0 bits (57), Expect(7) = 7e-060
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 285 YKYRWTSPLHFIDTP 329
Score = 27.6 bits (54), Expect(7) = 7e-060
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2 / +3
Query: 368 ATCANDYAIESIHYSCNYAYKDV 300
++C N++A ESI +C + Y V
Sbjct: 735 SSCVNNWAKESIQIACKWGYDGV 803
Score = 24.4 bits (47), Expect(7) = 7e-060
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 770 CNFKYSRDC 744
C F+YSRDC
Sbjct: 339 CGFQYSRDC 365
>gb|AW775007.1|AW775007 EST334158 KV3 Medicago truncatula cDNA clone pKV3-25M19, mRNA
sequence
Length = 561
Score = 125 bits (267), Expect(3) = 8e-057
Identities = 44/71 (61%), Positives = 58/71 (81%)
Frame = -2 / +1
Query: 677 YSYGQKTSYNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVS 498
Y ++ YNLT++L+FL+HF+GD+HQPLH GF D+GGN ITV WY+RK NLHHVWDVS
Sbjct: 346 YGSDIESKYNLTQALLFLSHFMGDIHQPLHCGFVSDKGGNEITVRWYKRKQNLHHVWDVS 525
Query: 497 IIDTAIKDFYN 465
II+T ++ FY+
Sbjct: 526 IIETEVERFYD 558
Score = 99.1 bits (210), Expect(3) = 8e-057
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = -2 / +1
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHYA 786
WG +GH +VCKIA+ LS AA AV+ LLPESA +LS+ C WAD VR+ + W+SPLH+A
Sbjct: 46 WGDDGHAIVCKIAQARLSNTAAKAVKKLLPESANNDLSSKCSWADHVRFIFQWSSPLHFA 225
Query: 785 NTP 777
+TP
Sbjct: 226 DTP 234
Score = 37.3 bits (75), Expect(3) = 8e-057
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2 / +1
Query: 731 GQQGMCVVGAINNYTDQLYSYG 666
G +G CVV AI+NYT QL YG
Sbjct: 286 GTKGRCVVAAISNYTTQLLDYG 351
>gb|BI271257.1|BI271257 NF053C09FL1F1070 Developing flower Medicago truncatula cDNA clone
NF053C09FL 5', mRNA sequence
Length = 667
Score = 127 bits (272), Expect(5) = 2e-051
Identities = 43/77 (55%), Positives = 62/77 (80%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YN+TE+L+FL+HF+GD+HQP+HVGF D+GGNTI + WYR K+NLHHVWD II TA+ D
Sbjct: 427 YNMTEALLFLSHFMGDIHQPMHVGFTSDKGGNTIDLRWYRHKSNLHHVWDREIILTALXD 606
Query: 473 FYNKSMDTMVEALKMNL 423
+Y+K + +++ L+ +
Sbjct: 607 YYDKDVTLLLQTLRKTI 657
Score = 64.3 bits (134), Expect(5) = 2e-051
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2 / +1
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
W KEGH M C IA+ L +A+ AV LLP G LS +C W DQ+R Y +
Sbjct: 112 WSKEGHEMTCLIAQALLKPEASEAVHHLLPPHVNGNLSALCVWPDQIRHWYKY 270
Score = 33.6 bits (67), Expect(5) = 2e-051
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 725 QGMCVVGAINNYTDQLYSYGQKTS 654
+ MCV GAI N+T QL Y + TS
Sbjct: 346 EDMCVAGAIKNFTSQLSHYKEGTS 417
Score = 29.0 bits (57), Expect(5) = 2e-051
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 262 YKYRWTSPLHFIDTP 306
Score = 24.4 bits (47), Expect(5) = 2e-051
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 770 CNFKYSRDC 744
C F+YSRDC
Sbjct: 316 CGFQYSRDC 342
>gb|CX528879.1|CX528879 s13dNF01E07MJ051_243825 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 625
Score = 122 bits (262), Expect(5) = 5e-050
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -2 / +3
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKD 474
YN+TE+L+FL+HF+GD+HQP+HVGF D+GGNTI + WYR K+NLHHVWD II TA+ D
Sbjct: 423 YNMTEALLFLSHFMGDIHQPMHVGFTSDKGGNTIDLRWYRHKSNLHHVWDREIILTALAD 602
Query: 473 FYNKSM 456
+Y+K +
Sbjct: 603 YYDKDV 620
Score = 64.3 bits (134), Expect(5) = 5e-050
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2 / +3
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
W KEGH M C IA+ L +A+ AV LLP G LS +C W DQ+R Y +
Sbjct: 108 WSKEGHEMTCLIAQALLKPEASEAVHHLLPPHVNGNLSALCVWPDQIRHWYKY 266
Score = 33.6 bits (67), Expect(5) = 5e-050
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 725 QGMCVVGAINNYTDQLYSYGQKTS 654
+ MCV GAI N+T QL Y + TS
Sbjct: 342 EDMCVAGAIKNFTSQLSHYKEGTS 413
Score = 29.0 bits (57), Expect(5) = 5e-050
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +3
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 258 YKYRWTSPLHFIDTP 302
Score = 24.4 bits (47), Expect(5) = 5e-050
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 770 CNFKYSRDC 744
C F+YSRDC
Sbjct: 312 CGFQYSRDC 338
>emb|CR962123.1| Medicago truncatula chromosome 5 clone mth2-167a19, WORKING DRAFT
SEQUENCE
Length = 129434
Score = 73.0 bits (153), Expect(5) = 2e-030
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = -2 / -1
Query: 917 LSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHYANTP 777
LS AA AV+ LLPESA +LS+ C WAD VR+ + W+SPLH+A+TP
Sbjct: 95090 LSNTAAKAVKKLLPESANNDLSSKCSWADHVRFIFQWSSPLHFADTP 94950
Score = 71.2 bits (149), Expect(8) = 1e-049
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = -2 / -1
Query: 917 LSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHYANTP 777
LS+ AA AV+ LLPESA +LS+ C WAD VR+ Y W+S LH+A+TP
Sbjct: 111566 LSDAAAKAVKKLLPESANNDLSSKCSWADHVRFIYPWSSALHFADTP 111426
Score = 64.8 bits (135), Expect(8) = 1e-049
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = -2 / -2
Query: 599 QPLHVGFEDDEGGNTITVHWYRRKANLHHVWDV 501
QPLH GF D+GGN ITVHWY RK NLHHV +
Sbjct: 103489 QPLHCGFVSDKGGNEITVHWYTRKQNLHHVCQI 103391
Score = 62.5 bits (130), Expect(5) = 2e-030
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -2 / -1
Query: 599 QPLHVGFEDDEGGNTITVHWYRRKANLHHVWDV 501
QPLH GF D+GGN ITV WY+RK NLHHV +
Sbjct: 94370 QPLHCGFVSDKGGNEITVRWYKRKQNLHHVCQI 94272
Score = 58.8 bits (122), Expect(8) = 1e-049
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -2 / -2
Query: 284 LGDDYFFSRYPIVEKRLAQAGIRLALVLNRIF 189
L DDYF SRYPIV RLAQ G+RLA LNRIF
Sbjct: 93523 LADDYFLSRYPIVNLRLAQGGVRLAATLNRIF 93428
Score = 42.3 bits (86), Expect(8) = 1e-049
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 512 VWDVSIIDTAIKDFYNKSMDTMVEALKMNLT 420
VWDVSII+T ++ FY+ + V+A++ N+T
Sbjct: 94195 VWDVSIIETEVERFYDSELSEFVDAIQQNIT 94103
Score = 39.6 bits (80), Expect(8) = 1e-049
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 731 GQQGMCVVGAINNYTDQLYSYG 666
G +G CVVGAI NYT+QL YG
Sbjct: 103831 GIKGRCVVGAITNYTNQLLDYG 103766
Score = 39.1 bits (79), Expect(5) = 2e-030
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = -2 / -2
Query: 656 SYNLTESLMFLAHFVGDVHQ 597
S NLT++L+FL+HF+GD+HQ
Sbjct: 94519 SDNLTQALLFLSHFMGDIHQ 94460
Score = 37.7 bits (76), Expect(8) = 1e-049
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -2 / -2
Query: 656 SYNLTESLMFLAHFVGDVHQ 597
S NLT++L FL+HF+GD+HQ
Sbjct: 103633 SDNLTQALYFLSHFMGDIHQ 103574
Score = 37.3 bits (75), Expect(5) = 2e-030
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2 / -1
Query: 731 GQQGMCVVGAINNYTDQLYSYG 666
G +G CVV AI+NYT QL YG
Sbjct: 94712 GTKGRCVVAAISNYTTQLLDYG 94647
Score = 33.1 bits (66), Expect(8) = 1e-049
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = -2 / -3
Query: 965 WGKEGHIMVCKIAE 924
WG++GH++VCKIA+
Sbjct: 111894 WGEDGHVIVCKIAQ 111853
Score = 31.8 bits (63), Expect(8) = 1e-049
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2 / -1
Query: 413 WSDDIVHWENCKNKHATCANDYAIESI 333
W+D + WE+C +K C Y + I
Sbjct: 93896 WADQVEDWESCGSKDTPCPITYVLSDI 93816
Score = 30.4 bits (60), Expect(5) = 2e-030
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 965 WGKEGHIMVCKIAE 924
WG +GH +VCKIA+
Sbjct: 95374 WGDDGHAIVCKIAQ 95333
>gb|BI271777.1|BI271777 NF012H03FL1F1031 Developing flower Medicago truncatula cDNA clone
NF012H03FL 5', mRNA sequence
Length = 586
Score = 107 bits (228), Expect(5) = 2e-045
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEGGNTITVHWYRRKANLHHVWD 504
YN+TE+L+FL+HF+GD+HQP+HVGF D+GGNTI + WYR K+NLHHVWD
Sbjct: 427 YNMTEALLFLSHFMGDIHQPMHVGFTSDKGGNTIDLRWYRHKSNLHHVWD 576
Score = 64.3 bits (134), Expect(5) = 2e-045
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2 / +1
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
W KEGH M C IA+ L +A+ AV LLP G LS +C W DQ+R Y +
Sbjct: 112 WSKEGHEMTCLIAQALLKPEASEAVHHLLPPHVNGNLSALCVWPDQIRHWYKY 270
Score = 33.6 bits (67), Expect(5) = 2e-045
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 725 QGMCVVGAINNYTDQLYSYGQKTS 654
+ MCV GAI N+T QL Y + TS
Sbjct: 346 EDMCVAGAIKNFTSQLSHYKEGTS 417
Score = 29.0 bits (57), Expect(5) = 2e-045
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 262 YKYRWTSPLHFIDTP 306
Score = 24.4 bits (47), Expect(5) = 2e-045
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 770 CNFKYSRDC 744
C F+YSRDC
Sbjct: 316 CGFQYSRDC 342
>gb|AC175090.3| Medicago truncatula clone mth2-156c19, WORKING DRAFT SEQUENCE, 16
ordered pieces
Length = 138337
Score = 65.2 bits (136), Expect(8) = 1e-040
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = -2 / -2
Query: 599 QPLHVGFEDDEGGNTITVHWYRRKANLHHV 510
QPLHVGF D GGN+ITV WYRRK NLHHV
Sbjct: 67521 QPLHVGFTGDLGGNSITVRWYRRKTNLHHV 67432
Score = 55.1 bits (114), Expect(8) = 1e-040
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = -2 / -2
Query: 923 KYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
+YLSE A AV+ LLP+SA +L++VC W D++R +YH+
Sbjct: 68499 EYLSEDALFAVKQLLPDSAQADLASVCSWPDEIRHNYHY 68383
Score = 44.1 bits (90), Expect(8) = 1e-040
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / -1
Query: 680 LYSYGQKTSYNLTESLMFLAHFVGDVHQ 597
+Y + + NLTE+LMFL+HFVGDVHQ
Sbjct: 67903 IYYFPPLITDNLTEALMFLSHFVGDVHQ 67820
Score = 42.3 bits (86), Expect(8) = 1e-040
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -2 / -1
Query: 521 LHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLT 420
L VWD II++A+K FY + TM++A++ N++
Sbjct: 66853 LFQVWDNMIIESALKKFYGSDLSTMIQAIQRNIS 66752
Score = 39.1 bits (79), Expect(8) = 1e-040
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 749 DCHNSRGQQGMCVVGAINNYTDQL 678
DCH+S G + CV GAI NYT QL
Sbjct: 68071 DCHDSYGHKHRCVTGAIYNYTMQL 68000
Score = 35.4 bits (71), Expect(8) = 1e-040
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2 / -2
Query: 821 WHYHWASPLHYANTP 777
+HY W+SPLHY +TP
Sbjct: 68391 YHYRWSSPLHYIDTP 68347
Score = 34.1 bits (68), Expect(8) = 1e-040
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / -2
Query: 425 LTDGWSDDIVHWENCKNKHATC 360
L D WS+D+ WE+C + H C
Sbjct: 66588 LQDIWSNDVSIWEHCAHNHTAC 66523
Score = 32.7 bits (65), Expect(8) = 1e-040
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2 / -3
Query: 968 AWGKEGHIMVCKIAEKYLS 912
AWGK+GH +CKI++ L+
Sbjct: 68621 AWGKDGHYAICKISQVTLT 68565
>gb|AC154089.3| Medicago truncatula clone mth2-91j8, WORKING DRAFT SEQUENCE, 8
unordered pieces
Length = 22126
Score = 60.2 bits (125), Expect(6) = 1e-036
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -2 / -3
Query: 599 QPLHVGFEDDEGGNTITVHWYRRKANLHHV 510
QPLH GF D+GGN I VHW+ RK NLHHV
Sbjct: 21377 QPLHTGFTTDKGGNLIDVHWFTRKQNLHHV 21288
Score = 51.9 bits (107), Expect(6) = 1e-036
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -2 / -1
Query: 278 DDYFFSRYPIVEKRLAQAGIRLALVLNRIF 189
DDYF SR PIV RLA+ G+RLA LNRIF
Sbjct: 20632 DDYFLSRLPIVSLRLAEGGVRLAATLNRIF 20543
Score = 51.0 bits (105), Expect(6) = 1e-036
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = -2 / -2
Query: 779 PQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQKT 657
P V + +S DC + G + CVVGAINNYT QL YG+ T
Sbjct: 21933 PLV*TYIHSGDCKDLNGVKDRCVVGAINNYTTQLLDYGKDT 21811
Score = 39.6 bits (80), Expect(6) = 1e-036
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = -2 / -3
Query: 656 SYNLTESLMFLAHFVGDVHQ 597
S NLT++L+FL+HF+GDVHQ
Sbjct: 21689 SDNLTQALLFLSHFMGDVHQ 21630
Score = 38.2 bits (77), Expect(6) = 1e-036
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 512 VWDVSIIDTAIKDFYNKSMDTMVEALKMNLT 420
VWD +II+TA + FY+ ++D + A++ N+T
Sbjct: 21195 VWDANIIETAEERFYDTNIDKYISAIQENIT 21103
Score = 33.6 bits (67), Expect(6) = 1e-036
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2 / -2
Query: 413 WSDDIVHWENCKNKHATCANDYAI 342
WSD++ WE C + TC + Y +
Sbjct: 20943 WSDEVAGWEACSSNKTTCPDMYVL 20872
>gb|CA922214.1|CA922214 EST639932 MTUS Medicago truncatula cDNA clone MTUS-50H3, mRNA
sequence
Length = 592
Score = 154 bits (330), Expect = 3e-036
Identities = 59/115 (51%), Positives = 77/115 (66%)
Frame = -2 / -2
Query: 533 RKANLHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCAN 354
RK NLHHVWDVSII+T ++ FY+ + V+A++ N+T W+D + WE+C +K C
Sbjct: 591 RKQNLHHVWDVSIIETEVERFYDSELSEFVDAIQQNITREWADQVEDWESCGSKDTPCPI 412
Query: 353 DYAIESIHYSCNYAYKDVEQDITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIF 189
YA ES +C +AY+D + L DDYF SRYPIV RLAQ G+RLA LNRIF
Sbjct: 411 TYATESSKDACKWAYEDASEGSVLDDDYFLSRYPIVNLRLAQGGVRLAATLNRIF 247
>gb|BI272246.1|BI272246 NF022F11FL1F1094 Developing flower Medicago truncatula cDNA clone
NF022F11FL 5', mRNA sequence
Length = 521
Score = 64.8 bits (135), Expect(5) = 1e-032
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2 / +1
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHW 807
W KEGH M C IA+ L +A+ AV LLP G LS +C W DQ+R Y +
Sbjct: 112 WSKEGHEMTCLIAQALLKPEASXAVHHLLPPHVNGNLSALCVWPDQIRHWYKY 270
Score = 62.5 bits (130), Expect(5) = 1e-032
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = -2 / +1
Query: 653 YNLTESLMFLAHFVGDVHQPLHVGFEDDEG 564
YN+TE+L+FL HF+GD+HQP+HVGF D+G
Sbjct: 427 YNMTEALLFLXHFMGDIHQPMHVGFTSDKG 516
Score = 33.6 bits (67), Expect(5) = 1e-032
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 725 QGMCVVGAINNYTDQLYSYGQKTS 654
+ MCV GAI N+T QL Y + TS
Sbjct: 346 EDMCVAGAIKNFTSQLSHYKEGTS 417
Score = 29.0 bits (57), Expect(5) = 1e-032
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 821 WHYHWASPLHYANTP 777
+ Y W SPLH+ +TP
Sbjct: 262 YKYRWTSPLHFIDTP 306
Score = 24.4 bits (47), Expect(5) = 1e-032
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 770 CNFKYSRDC 744
C F+YSRDC
Sbjct: 316 CGFQYSRDC 342
>gb|AJ503274.1|AJ503274 AJ503274 MTAMP Medicago truncatula cDNA clone mtgmadc120032b10,
mRNA sequence
Length = 433
Score = 99.1 bits (210), Expect(2) = 5e-025
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = -2 / +2
Query: 965 WGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQVRWHYHWASPLHYA 786
WG +GH +VCKIA+ LS AA AV+ LLPESA +LS+ C WAD VR+ + W+SPLH+A
Sbjct: 125 WGDDGHAIVCKIAQARLSNTAAKAVKKLLPESANNDLSSKCSWADHVRFIFQWSSPLHFA 304
Query: 785 NTP 777
+TP
Sbjct: 305 DTP 313
Score = 37.3 bits (75), Expect(2) = 5e-025
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2 / +2
Query: 731 GQQGMCVVGAINNYTDQLYSYG 666
G +G CVV AI+NYT QL YG
Sbjct: 365 GTKGRCVVAAISNYTTQLLDYG 430
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 860,061,448
Number of Sequences: 392609
Number of extensions: 11453152
Number of successful extensions: 111593
Number of sequences better than 1.0e-020: 23
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 37946552472
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)