TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716233.2.1
(1153 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula c... 349 e-113
gb|AC146572.11| Medicago truncatula clone mth2-104c10, comp... 135 e-102
gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Med... 132 1e-055
gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula c... 180 5e-051
gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Med... 172 6e-049
emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A1... 135 6e-048
gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula ... 176 2e-046
gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula g... 130 2e-045
gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cD... 137 3e-038
gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved l... 136 5e-038
gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower M... 134 2e-037
emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A1... 135 1e-030
emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A1... 131 3e-029
emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17... 130 4e-029
emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A1... 130 4e-029
gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating ... 117 3e-025
gb|BF640668.1|BF640668 NF032H03IN1F1031 Insect herbivory Me... 79 5e-021
>gb|CA921210.1|CA921210 EST638928 MTUS Medicago truncatula cDNA clone MTUS-37D6, mRNA
sequence
Length = 813
Score = 349 bits (756), Expect(2) = e-113
Identities = 135/157 (85%), Positives = 147/157 (93%)
Frame = -2 / -3
Query: 732 LSNQVPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAML 553
LS+QVPYYDYALDLILD+ESS+ D FTEEQNELIES+AEMLYG+IHARYILTSKGLAAML
Sbjct: 679 LSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGLAAML 500
Query: 552 EKFKNYDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSY 373
+K+KNYDFGRCPRVYC GQPCLP GQSD+PRSSTVKIYCP+CE++ YPRSKYQGNIDG+Y
Sbjct: 499 DKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAY 320
Query: 372 FGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKP 262
FGTTFPHL LMTY LKPQKPSQ Y PRVFGFKLHKP
Sbjct: 319 FGTTFPHLLLMTYGQLKPQKPSQNYVPRVFGFKLHKP 209
Score = 217 bits (469), Expect(3) = 9e-070
Identities = 103/138 (74%), Positives = 107/138 (77%)
Frame = +2 / +3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SL PKTLG CDGFCGF C *VI R*GNVVPK PSMLP YLD G* SSH GQY
Sbjct: 210 GL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSMLP*YLDRG**MSSHLGQY 389
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISA 622
IFTVLDLG SD P GRQG P+Q TLGHLPKS*FL S++AA PLLV + RA*I P SISA
Sbjct: 390 IFTVLDLGMSDWPTGRQGCPEQ*TLGHLPKS*FLYLSSMAASPLLVNI*RA*IIP*SISA 569
Query: 623 DDSINSFCSSVNPSSLED 676
DSINSFCSSVN S ED
Sbjct: 570 ADSINSFCSSVNMSPWED 623
Score = 139 bits (299), Expect(2) = 3e-035
Identities = 72/157 (45%), Positives = 98/157 (62%)
Frame = -1 / -2
Query: 730 E*SGAIL*LCT*SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVG 551
E S A+L*LC+* + *V * VYRG K*+NR+ DA+ ++SC ++ +QQ + C+ G
Sbjct: 677 EQSSALL*LCS*FNFGC*VLPW*HVYRGTK*VNRISSGDALWYDSCPLYIDQQRTGCHAG 498
Query: 550 EVQELRLW*MPQGVLLWPALPSSRAIRCS*IEHCEDILSEMRRT*LSKIQVPRQHRWIIL 371
+VQEL L *MP+ +LL LPSS +R S*+ HCEDIL E+ R LS +QV RQHR +
Sbjct: 497 QVQEL*LR*MPKSLLLRTTLPSSWPVRHS*V*HCEDILPEV*RHLLSSVQVSRQHRRGLF 318
Query: 370 WDDIPSSFPDDXXXXXXXXAVTAIHSKGFRLQTSQAV 260
W I S DD +T + S+ F +QTS A+
Sbjct: 317 WYYISSPVADDLWTTEATETITELCSESFWIQTS*AI 207
Score = 118 bits (253), Expect(2) = 8e-032
Identities = 70/164 (42%), Positives = 81/164 (49%)
Frame = +3 / +1
Query: 243 SYNSVMTACEV*SRKPLECIAVTXXXXXXXXXXXGKDEGMSSQSMIHRCCLGTWILDS*V 422
S+N A EV* +K E +V E M Q+ RCCL TW DS
Sbjct: 190 SFNFSFMAYEV*IQKLSEHSSVMVSVASVVHKSSATGEEM*YQNKPRRCCLDTWTEDSKC 369
Query: 423 LRISDNISSQCSI*EHLIALLEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHEL 602
L S NISSQC *E LEG+ SS GIY+S SS T P Q CW HE
Sbjct: 370 LHTSGNISSQC*T*ECRTGQLEGKVVRSSKLLGIYRSHSSCTCPAWQPVLCWSIYNGHES 549
Query: 603 NRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSD 734
AS + RL HF PR*T HH +TQ + +Q HNHN A D S+
Sbjct: 550 YHKASPLLIRLTHFVPR*TCHHGRTQHPKLNQEHNHNKALDCSN 681
Score = 105 bits (225), Expect(2) = 1e-027
Identities = 48/93 (51%), Positives = 66/93 (70%)
Frame = +1 / +2
Query: 337 SHQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHP 516
SHQ+++R+C K+ +DVAL+LG IV F R IYLHSAR RN+ L WKA L+ AV+
Sbjct: 284 SHQQQVRKCSTKISPVDVALILGPRIVNVFTPRAIYLHSARPRNVGLANWKARLSGAVNS 463
Query: 517 GASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
AST+V+VL L+QH S + AG ++ MN T++H
Sbjct: 464 WASTEVIVLVLVQHGSQSFAGQYITGMNHTIKH 562
Score = 105 bits (224), Expect(2) = 3e-024
Identities = 62/136 (45%), Positives = 72/136 (52%)
Frame = -3 / -1
Query: 656 LPRSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQG 477
LPR+KM+*S+ +RC V*FM +*PA+ L CW S+RT T VDA TA + AFQ
Sbjct: 603 LPRNKMS*SNQQRRCFMV*FMPVIY*PAKDWLPCWTSTRTMTSVDAQEFTAPDNLAFQLA 424
Query: 476 NQMFLDRAL*RYIVRNAKNLTIQDPSTKATSMDHTLGRHSLIFS**LXXXXXXXXRHSNT 297
+ FL AL*RYI R K TI PS KATS L H L **L H
Sbjct: 423 SPTFLGLAL*RYIARGVKTFTILGPSIKATSTGLILVLHFLTCC**LMDN*SHRNHHRTM 244
Query: 296 LQGFSASNFTSRHDRV 249
+ F SNF S V
Sbjct: 243 FREFLDSNFISHKAEV 196
Score = 81.3 bits (171), Expect(2) = e-113
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -2 / -1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLC 736
WISWFC LRGNEFFCE+DDDYIQDDFNLC
Sbjct: 768 WISWFCNLRGNEFFCEVDDDYIQDDFNLC 682
Score = 56.1 bits (116), Expect(3) = 9e-070
Identities = 20/44 (45%), Positives = 36/44 (81%)
Frame = +1 / +1
Query: 736 TQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTHIRIFT 867
TQ+++IL ++I++LTKEFI+SQ +P +P ++++G +IR+FT
Sbjct: 682 TQIEVILDVIIVNLTKEFISSQIAKPRDPRCIITVGNHYIRLFT 813
Score = 40.5 bits (82), Expect(2) = 8e-032
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3 / +3
Query: 735 HTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLH 866
HT *+H +H + HKRIH L+ +T +S+ R HQ LH
Sbjct: 681 HTD*SHLGCNHRQPHKRIHFLSNCKTTRSKMYHHRRKPLHQTLH 812
Score = 39.6 bits (80), Expect(2) = 1e-027
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2 / +2
Query: 737 HRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
HRLK QKNS P +QNHEIQD
Sbjct: 683 HRLKSSWM*SSSTSQKNSFPLKLQNHEIQD 772
Score = 31.3 bits (62), Expect(3) = 9e-070
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1 / +2
Query: 652 GKPVIIRRLNV*DEIKCIIIIWHLITQTTQVK 747
GK V + LN+ + IK IIII HL QT ++K
Sbjct: 599 GKHVTMGGLNIQN*IKSIIIIRHLTAQTHRLK 694
Score = 30.9 bits (61), Expect(2) = 3e-035
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = -3 / -2
Query: 866 VKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCV 735
VK LM* P G G E MNSFVR M +M CV
Sbjct: 812 VKSLM*WFPTVMIHLGSRGFAI*EEMNSFVRLTMITSKMTSICV 681
Score = 28.6 bits (56), Expect(2) = 3e-024
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 865 *RF*CEWFRGRGHVLDFMVLYIARQ*ILL* 776
*R *C FR ++LD +VL R+*ILL*
Sbjct: 811 *RV*CSGFRR**YILDLVVLQFERK*ILL* 722
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence
Length = 109548
Score = 135 bits (289), Expect(5) = e-102
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = -2 / +1
Query: 555 LEKFKNYDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGS 376
L+K+KNYDFGRCPRVYC GQPCLP GQSD+PRSSTVKIYCP+CE++ YPRSKYQG+I
Sbjct: 86788 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGSILIQ 86967
Query: 375 YF 370
Y+
Sbjct: 86968 YY 86973
Score = 130 bits (278), Expect(5) = e-102
Identities = 47/52 (90%), Positives = 51/52 (98%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSN 667
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+
Sbjct: 86291 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSH 86446
Score = 96.8 bits (205), Expect(5) = e-102
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = -2 / +1
Query: 390 NIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKP 262
+IDG+YFGTTFPHL LMTY LKPQKPSQ Y PRVFGFKLHKP
Sbjct: 88156 DIDGAYFGTTFPHLLLMTYGQLKPQKPSQNYVPRVFGFKLHKP 88284
Score = 94.5 bits (200), Expect(3) = 5e-036
Identities = 43/66 (65%), Positives = 49/66 (74%)
Frame = +2 / -2
Query: 359 NVVPKYDPSMLPWYLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS* 538
+++ Y +LP YLD G* SSH GQYIFTVLDLG SD P GRQG P+Q TLGHLPKS*
Sbjct: 86984 DIIK*Y*IRILP*YLDRG**MSSHLGQYIFTVLDLGMSDWPTGRQGCPEQ*TLGHLPKS* 86805
Query: 539 FLNFSN 556
FL S+
Sbjct: 86804 FLYLSS 86787
Score = 92.7 bits (196), Expect(5) = 5e-056
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +1 / -3
Query: 676 LNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTHI 855
LN+ + IK IIII HL QTTQ+++IL ++I++LTKEFI+SQ +P +P ++++GTT+I
Sbjct: 86437 LNIQN*IKSIIIIRHLTAQTTQIEVILDVIIVNLTKEFISSQIAKPRDPRCIITVGTTNI 86258
Query: 856 RIFTVSFKFL 885
R+FTV F+FL
Sbjct: 86257 RLFTVRFRFL 86228
Score = 84.0 bits (177), Expect(3) = 5e-036
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3 / -2
Query: 663 HH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPR 842
+H +TQ + +Q HNHN A D S+HT *+H +H + HKRIH L+ +T +S+ R
Sbjct: 86450 YHGRTQHPKLNQEHNHNKALDCSNHTD*SHLGCNHRQPHKRIHFLSNCKTTRSKMYHHRR 86271
Query: 843 NHSHQNLHCQFQIP 884
NH HQ LHC FQIP
Sbjct: 86270 NH*HQTLHCPFQIP 86229
Score = 79.0 bits (166), Expect(5) = e-102
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -2 / +3
Query: 663 DGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKF 544
D FTEEQNELIES+AEMLYG+IHARYILTSKGLAAM+ F
Sbjct: 86592 DMFTEEQNELIESAAEMLYGMIHARYILTSKGLAAMVGIF 86711
Score = 72.5 bits (152), Expect(5) = 5e-056
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = +2 / -2
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSM 388
GL*SL PKTLG CDGFCGF C *VI R*GNVVPK PSM
Sbjct: 88283 GL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSM 88158
Score = 71.6 bits (150), Expect(3) = 6e-024
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = -1 / +3
Query: 553 GEVQELRLW*MPQGVLLWPALPSSRAIRCS*IEHCEDILSEMRRT*LSKIQVPRQHRWII 374
G+VQEL L *MP+ +LL LPSS +R S*+ HCEDIL E+ R LS +QV RQ+ + I
Sbjct: 86790 GQVQEL*LR*MPKSLLLRTTLPSSWPVRHS*V*HCEDILPEV*RHLLSSVQVSRQYPYSI 86969
Query: 373 LWDDI 359
L++D+
Sbjct: 86970 LFNDV 86984
Score = 69.8 bits (146), Expect(5) = 5e-056
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1 / -1
Query: 385 DVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPGASTKVVVLELLQ 555
D AL+LG IV F R IYLHSAR RN+ L WKA L+ AV+ AST+V+VL L+Q
Sbjct: 86958 DTALILGPRIVNVFTPRAIYLHSARPRNVGLANWKARLSGAVNSWASTEVIVLVLVQ 86788
Score = 54.2 bits (112), Expect(3) = 6e-024
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -1 / +1
Query: 880 I*N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LC 701
I*N Q*R *C WFR ++LD +VL R+*ILL* *L+ * VW E S A+L*LC
Sbjct: 86233 I*NGQ*RV*C*WFRR**YILDLVVLQFERK*ILL*G*R*LHPR*LQSVWFEQSSALL*LC 86412
Query: 700 T* 695
+*
Sbjct: 86413 S* 86418
Score = 53.8 bits (111), Expect(5) = 5e-056
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2 / -3
Query: 557 IAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPS 664
+AA PLLV + RA*I P SISA DSINSFCSSVN S
Sbjct: 86698 MAASPLLVNI*RA*IIP*SISAADSINSFCSSVNMS 86591
Score = 46.4 bits (95), Expect(5) = e-102
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +2
Query: 1041 AGMDRKRIKDALEKHLERSSPSTSRGV 961
A +DRKRI D L+K LERSSPSTSR +
Sbjct: 85190 ASVDRKRINDVLDKQLERSSPSTSRTI 85270
Score = 43.7 bits (89), Expect(3) = 6e-024
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = -1 / +2
Query: 664 *RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCN 557
* VYRG K*+NR+ DA+ ++SC ++ +QQ + C+
Sbjct: 86591 *HVYRGTK*VNRISSGDALWYDSCPLYIDQQRTGCH 86698
Score = 40.9 bits (83), Expect(5) = 5e-056
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -1
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPPQQHQTTPI 1072
LEVDG+D S C S SL+RFRS A T P+
Sbjct: 85263 LEVDGEDRSSCLSRTSLIRFRSTDATSALDPTPPL 85159
Score = 32.2 bits (64), Expect(3) = 5e-036
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3 / -1
Query: 573 CWLKCIVHELNRTASLQMTRLIHFAPR*TRH 665
CW HE AS + RL HF PR*T H
Sbjct: 86682 CWSIYNGHESYHKASPLLIRLTHFVPR*TCH 86590
>gb|BE319805.2|BE319805 NF020A01RT1F1001 Developing root Medicago truncatula cDNA clone
NF020A01RT 5', mRNA sequence
Length = 390
Score = 132 bits (282), Expect(3) = 1e-055
Identities = 47/54 (87%), Positives = 53/54 (98%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDD 661
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+++
Sbjct: 75 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHEE 236
Score = 89.0 bits (188), Expect(3) = 2e-032
Identities = 38/74 (51%), Positives = 57/74 (77%)
Frame = +1 / -2
Query: 664 IIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLG 843
++R N+ ++IK III+ HL Q+T+V++IL ++II+LTKE I+S+ EP*+P VLS+
Sbjct: 233 LMRGFNIQNQIKSIIIVRHLAAQSTKVEVILDVIIINLTKELISSEIAEP*DPRCVLSIR 54
Query: 844 TTHIRIFTVSFKFL 885
TTHI +FTV F+ L
Sbjct: 53 TTHI*LFTVCFRLL 12
Score = 70.7 bits (148), Expect(3) = 1e-055
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = -2 / +3
Query: 651 EEQNELIESSAEMLYGLIHARYILTSKGLAAM 556
EEQNELIES+AEMLYG+IHARYILTSKG+AAM
Sbjct: 231 EEQNELIESAAEMLYGMIHARYILTSKGMAAM 326
Score = 55.6 bits (115), Expect(3) = 2e-032
Identities = 27/32 (84%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 557 IAARPLLVKMYRA*IKPYSISADDSINSFCSS 652
IAA PLLV MYRA*I P SISA DSINSFCSS
Sbjct: 325 IAAIPLLVNMYRA*IIP*SISAADSINSFCSS 230
Score = 54.7 bits (113), Expect(3) = 1e-055
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -2 / +1
Query: 555 LEKFKNYDFGRCPRVYCCGQP 493
L+K+KNYDFGRCPRVYC GQP
Sbjct: 328 LDKYKNYDFGRCPRVYCSGQP 390
Score = 35.0 bits (70), Expect(3) = 2e-032
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / -2
Query: 494 GWPQQYTLGHLPKS*FLNFS 553
G P+Q TLGHLPKS*FL S
Sbjct: 389 GCPEQ*TLGHLPKS*FLYLS 330
>gb|DW018596.1|DW018596 EST1227557 MTY Medicago truncatula cDNA clone MTYB854, mRNA
sequence
Length = 792
Score = 180 bits (387), Expect(2) = 5e-051
Identities = 71/90 (78%), Positives = 77/90 (85%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+ D FTEEQ
Sbjct: 432 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQ 611
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAML 553
NELIES AEMLYG+IHA+ LA L
Sbjct: 612 NELIESVAEMLYGMIHAQEFTAPDNLAFQL 701
Score = 110 bits (234), Expect(2) = 4e-031
Identities = 49/100 (49%), Positives = 63/100 (63%)
Frame = +3 / -1
Query: 594 HELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHR 773
HE AS + RL HF PR*T HH +TQ + +Q HNHN A D S+HT *+H +H +
Sbjct: 660 HESYHKASPLLIRLTHFVPR*TCHHGRTQHPKLNQEHNHNKALDCSNHTD*SHLGCNHRQ 481
Query: 774 SHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
HKRIH L+ +T +S+ RNH HQ L+C FQIPH +
Sbjct: 480 PHKRIHFLSNCKTTRSKMYHHRRNH*HQTLNCPFQIPHRK 361
Score = 103 bits (219), Expect(2) = 2e-038
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -2 / +2
Query: 531 FGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQ 394
+ CPRVYC GQPCLP GQSD+PRSSTV+IYCP+CE++ YPRSKYQ
Sbjct: 650 YDSCPRVYCSGQPCLPVGQSDIPRSSTVRIYCPRCEDIYYPRSKYQ 787
Score = 94.1 bits (199), Expect(4) = 1e-048
Identities = 40/78 (51%), Positives = 60/78 (76%)
Frame = +1 / -2
Query: 652 GKPVIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRV 831
GK V + LN+ + IK IIII HL QTTQ+++IL ++I++LTKEFI+SQ +P +P +
Sbjct: 602 GKHVTMGGLNIQN*IKSIIIIRHLTAQTTQIEVILDVIIVNLTKEFISSQIAKPRDPRCI 423
Query: 832 LSLGTTHIRIFTVSFKFL 885
+++GTT+IR+ TV F+FL
Sbjct: 422 ITVGTTNIRLLTVRFRFL 369
Score = 78.0 bits (164), Expect(2) = 2e-038
Identities = 48/96 (50%), Positives = 61/96 (63%)
Frame = -1 / +2
Query: 880 I*N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LC 701
I*N Q R *C WFR ++LD +VL R+*ILL* *L+ * VW E S A+L*LC
Sbjct: 374 I*NGQLRV*C*WFRR**YILDLVVLQFERK*ILL*G*R*LHPR*LQSVWFEQSSALL*LC 553
Query: 700 T*SHLRH*VF***RVYRGAK*INRVICRDAVRFNSC 593
+* + *V * VYRG K*+NR+ DA+ ++SC
Sbjct: 554 S*FNFGC*VLPW*HVYRGTK*VNRISSGDALWYDSC 661
Score = 72.1 bits (151), Expect(4) = 1e-048
Identities = 31/42 (73%), Positives = 32/42 (76%)
Frame = +2 / -1
Query: 398 YLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGH 523
YLD G* SSH GQYI TVLDLG SD P GRQG P+Q TLGH
Sbjct: 783 YLDRG**MSSHLGQYILTVLDLGMSDWPTGRQGCPEQ*TLGH 658
Score = 46.9 bits (96), Expect(2) = 4e-031
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = +1 / -3
Query: 394 LVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPGA 522
L+LG IV F R IY HSAR RN+ L WKA L+ AV+ A
Sbjct: 787 LILGPRIVNVFTPRAIYPHSARPRNVGLANWKARLSGAVNSWA 659
Score = 46.4 bits (95), Expect(2) = 5e-051
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 1041 AGMDRKRIKDALEKHLERSSPSTSRGV 961
A +DRKRI D L+K LERSSPSTSR +
Sbjct: 192 ASVDRKRINDVLDKQLERSSPSTSRTI 272
Score = 44.6 bits (91), Expect(4) = 1e-048
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +2 / -3
Query: 593 A*IKPYSISADDSINSFCSSVNPSSLED 676
A*I P SISA DSINSFCSSVN S ED
Sbjct: 661 A*IIP*SISATDSINSFCSSVNMSPWED 578
Score = 40.9 bits (83), Expect(4) = 1e-048
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPPQQHQTTPI 1072
LEVDG+D S C S SL+RFRS A T P+
Sbjct: 265 LEVDGEDRSSCLSRTSLIRFRSTDATSALDPTPPL 161
>gb|BG452468.1|BG452468 NF089F06LF1F1048 Developing leaf Medicago truncatula cDNA clone
NF089F06LF 5', mRNA sequence
Length = 638
Score = 172 bits (371), Expect(2) = 6e-049
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+ D FTEEQ
Sbjct: 414 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQ 593
Query: 642 NELIESSAEMLYGLI 598
NELIES AEMLYG+I
Sbjct: 594 NELIESXAEMLYGMI 638
Score = 108 bits (230), Expect = 2e-022
Identities = 48/94 (51%), Positives = 60/94 (63%)
Frame = +3 / -3
Query: 612 ASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIH 791
AS RL HF PR*T HH +TQ + +Q HNHN A D S+HT *+H +H + HKRIH
Sbjct: 624 ASPLXIRLTHFVPR*TCHHGRTQHPKLNQEHNHNKALDCSNHTD*SHLGCNHRQPHKRIH 445
Query: 792 CLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
L+ +T +S+ RNH HQ LHC FQIPH +
Sbjct: 444 FLSNCKTTRSKMYHHRRNH*HQTLHCPFQIPHRK 343
Score = 96.8 bits (205), Expect(3) = 1e-032
Identities = 41/78 (52%), Positives = 61/78 (78%)
Frame = +1 / -1
Query: 652 GKPVIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRV 831
GK V + LN+ + IK IIII HL QTTQ+++IL ++I++LTKEFI+SQ +P +P +
Sbjct: 584 GKHVTMGGLNIQN*IKSIIIIRHLTAQTTQIEVILDVIIVNLTKEFISSQIAKPRDPRCI 405
Query: 832 LSLGTTHIRIFTVSFKFL 885
+++GTT+IR+FTV F+FL
Sbjct: 404 ITVGTTNIRLFTVRFRFL 351
Score = 46.4 bits (95), Expect(2) = 6e-049
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 1041 AGMDRKRIKDALEKHLERSSPSTSRGV 961
A +DRKRI D L+K LERSSPSTSR +
Sbjct: 174 ASVDRKRINDVLDKQLERSSPSTSRTI 254
Score = 42.3 bits (86), Expect(3) = 1e-032
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2 / -2
Query: 599 IKPYSISADDSINSFCSSVNPSSLED 676
I P SISA DSINSFCSSVN S ED
Sbjct: 637 IIP*SISAXDSINSFCSSVNMSPWED 560
Score = 40.9 bits (83), Expect(3) = 1e-032
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPPQQHQTTPI 1072
LEVDG+D S C S SL+RFRS A T P+
Sbjct: 247 LEVDGEDRSSCLSRTSLIRFRSTDATSALDPTPPL 143
>emb|CR311810.1| mte1-34G19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 624
Score = 135 bits (290), Expect(2) = 6e-048
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = -2 / +1
Query: 555 LEKFKNYDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGS 376
L+K+KNYDFGRCPRVYC GQPCLP GQSD+PRSSTVKIYCP+CE+L YPRSKYQG+I +
Sbjct: 289 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGSILMT 468
Query: 375 Y 373
Y
Sbjct: 469 Y 471
Score = 93.2 bits (197), Expect(2) = 3e-030
Identities = 42/57 (73%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 386 MLPWYLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSN 556
+LP YLD G* SSH GQYIFTVLDLG SD P GRQG P+Q TLGHLPKS*FL S+
Sbjct: 458 ILP*YLDRG**RSSHLGQYIFTVLDLGMSD*PTGRQGCPEQ*TLGHLPKS*FLYLSS 288
Score = 77.6 bits (163), Expect(2) = 6e-048
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -2 / +2
Query: 663 DGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAML 553
D FTEEQNELIES+AEMLYG+IHARYILTSKG+AAM+
Sbjct: 95 DMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMV 205
Score = 61.1 bits (127), Expect(2) = 3e-030
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = +2 / -1
Query: 557 IAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSL 670
IAA PLLV MYRA*I P SISA DSINSFCSSVN S +
Sbjct: 201 IAAIPLLVNMYRA*IIP*SISAADSINSFCSSVNISPM 88
>gb|AJ499063.1|AJ499063 AJ499063 MTPOSE Medicago truncatula cDNA clone mt--acc955211g03,
mRNA sequence
Length = 551
Score = 176 bits (379), Expect(2) = 2e-046
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = -2 / +1
Query: 492 CLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQK 313
CLP GQSD+PRSSTVKIYCP+CE++ YPRSKYQGNIDG+YFGTTFPHL LMTY LKPQK
Sbjct: 34 CLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLLLMTYGQLKPQK 213
Query: 312 PSQQYTPRVFGFKLHKP 262
PSQ Y PRVFGFKLHKP
Sbjct: 214 PSQNYVPRVFGFKLHKP 264
Score = 130 bits (279), Expect(2) = 7e-030
Identities = 59/77 (76%), Positives = 59/77 (76%)
Frame = +2 / -1
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SL PKTLG CDGFCGF C *VI R*GNVVPK PSMLP YLD G* SSH GQY
Sbjct: 263 GL*SLNPKTLGT*FCDGFCGFSCP*VISNR*GNVVPK*APSMLP*YLDRG**MSSHLGQY 84
Query: 443 IFTVLDLGTSDCPAGRQ 493
IFTVLDLG SD P GRQ
Sbjct: 83 IFTVLDLGMSDWPTGRQ 33
Score = 31.8 bits (63), Expect(2) = 2e-046
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 525 RCPRVYCCGQP 493
RCPRVYC GQP
Sbjct: 2 RCPRVYCSGQP 34
Score = 22.1 bits (42), Expect(2) = 7e-030
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / -3
Query: 488 RQGWPQQYTLGHL 526
+ G P+Q TLGHL
Sbjct: 39 KAGCPEQ*TLGHL 1
>gb|CG967562.1|CG967562 MBEKO04TF mth2 Medicago truncatula genomic clone 75B7, DNA sequence
Length = 906
Score = 130 bits (279), Expect(2) = 2e-045
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = -2 / -2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDD 661
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+ +
Sbjct: 524 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGE 363
Score = 91.8 bits (194), Expect(2) = 6e-029
Identities = 39/80 (48%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 667 IRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGT 846
+R N+ ++IK III+ HL Q+T+V++IL ++II+LTKE I+S+ EP*+P VLS+ T
Sbjct: 369 MRGFNIQNQIKSIIIVRHLAAQSTKVEVILDVIIINLTKELISSEIAEP*DPRCVLSIRT 548
Query: 847 THIRIFTVSFKFLTIRHLRL 906
THI +FTV F+ L +H+ +
Sbjct: 549 THI*LFTVCFRLLCNQHINV 608
Score = 77.6 bits (163), Expect(2) = 2e-045
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -2 / -3
Query: 663 DGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAML 553
D FTEEQNELIES+AEMLYG+IHARYILTSKG+AAM+
Sbjct: 145 DMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMV 35
Score = 61.1 bits (127), Expect(2) = 6e-029
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = +2 / +3
Query: 557 IAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSL 670
IAA PLLV MYRA*I P SISA DSINSFCSSVN S +
Sbjct: 39 IAAIPLLVNMYRA*IIP*SISAADSINSFCSSVNISPM 152
>gb|BF004691.1|BF004691 EST433189 KV1 Medicago truncatula cDNA clone pKV1-18I24, mRNA
sequence
Length = 566
Score = 137 bits (293), Expect(2) = 3e-038
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEE 646
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+ D TEE
Sbjct: 389 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMCTEE 565
Score = 95.5 bits (202), Expect(2) = 5e-025
Identities = 41/82 (50%), Positives = 53/82 (64%)
Frame = +3 / -1
Query: 648 PR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRT 827
PR T HH +TQ + +Q HNHN A D S+HT *+H +H + HKRIH L+ +T +S+
Sbjct: 563 PRYTCHHGRTQHPKLNQEHNHNKALDCSNHTD*SHLGCNHRQPHKRIHFLSNCKTTRSKM 384
Query: 828 CPLPRNHSHQNLHCQFQIPHHQ 893
RNH HQ LHC FQIPH +
Sbjct: 383 YHHRRNH*HQTLHCPFQIPHRK 318
Score = 46.4 bits (95), Expect(2) = 3e-038
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +2
Query: 1041 AGMDRKRIKDALEKHLERSSPSTSRGV 961
A +DRKRI D L+K LERSSPSTSR +
Sbjct: 149 ASVDRKRINDVLDKQLERSSPSTSRTI 229
Score = 40.9 bits (83), Expect(2) = 5e-025
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPPQQHQTTPI 1072
LEVDG+D S C S SL+RFRS A T P+
Sbjct: 222 LEVDGEDRSSCLSRTSLIRFRSTDATSALDPTPPL 118
>gb|BI263331.1|BI263331 NF091D01PL1F1012 Phosphate starved leaf Medicago truncatula cDNA
clone NF091D01PL 5', mRNA sequence
Length = 582
Score = 136 bits (291), Expect(2) = 5e-038
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFT 652
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+ D FT
Sbjct: 411 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFT 581
Score = 96.8 bits (205), Expect(2) = 2e-025
Identities = 41/78 (52%), Positives = 61/78 (78%)
Frame = +1 / -2
Query: 652 GKPVIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRV 831
GK V + LN+ + IK IIII HL QTTQ+++IL ++I++LTKEFI+SQ +P +P +
Sbjct: 581 GKHVTMGGLNIQN*IKSIIIIRHLTAQTTQIEVILDVIIVNLTKEFISSQIAKPRDPRCI 402
Query: 832 LSLGTTHIRIFTVSFKFL 885
+++GTT+IR+FTV F+FL
Sbjct: 401 ITVGTTNIRLFTVRFRFL 348
Score = 46.4 bits (95), Expect(2) = 5e-038
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 1041 AGMDRKRIKDALEKHLERSSPSTSRGV 961
A +DRKRI D L+K LERSSPSTSR +
Sbjct: 171 ASVDRKRINDVLDKQLERSSPSTSRTI 251
Score = 40.9 bits (83), Expect(2) = 2e-025
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPPQQHQTTPI 1072
LEVDG+D S C S SL+RFRS A T P+
Sbjct: 244 LEVDGEDRSSCLSRTSLIRFRSTDATSALDPTPPL 140
>gb|BQ149655.1|BQ149655 NF107D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF107D02FL 5', mRNA sequence
Length = 619
Score = 134 bits (287), Expect(2) = 2e-037
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFT 652
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ES + D FT
Sbjct: 430 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESXHGDMFT 600
Score = 97.3 bits (206), Expect(2) = 2e-025
Identities = 41/78 (52%), Positives = 61/78 (78%)
Frame = +1 / -2
Query: 652 GKPVIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRV 831
GK V + LN+ + IK IIII HL QTTQ+++IL ++I++LTKEFI+SQ +P +P +
Sbjct: 600 GKHVTMXGLNIQN*IKSIIIIRHLTAQTTQIEVILDVIIVNLTKEFISSQIAKPRDPRCI 421
Query: 832 LSLGTTHIRIFTVSFKFL 885
+++GTT+IR+FTV F+FL
Sbjct: 420 ITVGTTNIRLFTVRFRFL 367
Score = 46.4 bits (95), Expect(2) = 2e-037
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +1
Query: 1041 AGMDRKRIKDALEKHLERSSPSTSRGV 961
A +DRKRI D L+K LERSSPSTSR +
Sbjct: 190 ASVDRKRINDVLDKQLERSSPSTSRTI 270
Score = 40.9 bits (83), Expect(2) = 2e-025
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPPQQHQTTPI 1072
LEVDG+D S C S SL+RFRS A T P+
Sbjct: 263 LEVDGEDRSSCLSRTSLIRFRSTDATSALDPTPPL 159
>emb|CR501194.1| mth2-178J6RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 805
Score = 135 bits (290), Expect = 1e-030
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = -2 / +2
Query: 555 LEKFKNYDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGS 376
L+K+KNYDFGRCPRVYC GQPCLP GQSD+PRSSTVKIYCP+CE+L YPRSKYQG+I +
Sbjct: 50 LDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGSILMT 229
Query: 375 Y 373
Y
Sbjct: 230 Y 232
>emb|CR487557.1| mth2-156M4RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 165
Score = 131 bits (280), Expect = 3e-029
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = -2 / +3
Query: 552 EKFKNYDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQG 391
+K+KNYDFGRCPRVYC GQPCLP GQSD+PRSSTVKIYCP+CE+L YPRSKYQG
Sbjct: 3 DKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQG 164
>emb|CR343665.1| mte1-76N8RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 626
Score = 130 bits (279), Expect = 4e-029
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = -2 / -2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDD 661
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+ +
Sbjct: 457 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGE 296
>emb|CR297274.1| mte1-14C10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 560
Score = 130 bits (279), Expect = 4e-029
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = -2 / -2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDD 661
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILD+ESS+ +
Sbjct: 289 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGE 128
>gb|CX541928.1|CX541928 s13dNF0BF10GS091_467164 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 620
Score = 117 bits (251), Expect = 3e-025
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLI 688
WISWFC LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLI
Sbjct: 484 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLI 618
>gb|BF640668.1|BF640668 NF032H03IN1F1031 Insect herbivory Medicago truncatula cDNA clone
NF032H03IN 5', mRNA sequence
Length = 546
Score = 79.0 bits (166), Expect(2) = 5e-021
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLC 736
WISWFC RGNEFFCE+DDDYIQDDFNLC
Sbjct: 459 WISWFCNXRGNEFFCEVDDDYIQDDFNLC 545
Score = 46.4 bits (95), Expect(2) = 5e-021
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 1041 AGMDRKRIKDALEKHLERSSPSTSRGV 961
A +DRKRI D L+K LERSSPSTSR +
Sbjct: 219 ASVDRKRINDVLDKQLERSSPSTSRTI 299
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,064,071,739
Number of Sequences: 392609
Number of extensions: 14469398
Number of successful extensions: 58065
Number of sequences better than 1.0e-020: 20
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 41213474208
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)