TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.3
(687 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cD... 215 6e-055
gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell cultu... 215 6e-055
gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell cultu... 215 6e-055
gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Me... 215 6e-055
gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cD... 215 6e-055
gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula ... 215 6e-055
gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infect... 215 6e-055
gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula c... 215 6e-055
gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved l... 208 9e-053
gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell cultu... 205 5e-052
gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula c... 201 8e-051
gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula... 200 2e-050
gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula c... 173 9e-049
gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating ... 185 7e-046
gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula c... 174 2e-042
gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKI... 98 1e-040
gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower M... 138 6e-032
>gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cDNA clone pGVN-49J6, mRNA
sequence
Length = 393
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 98 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 277
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 278 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 376
Score = 160 bits (345), Expect = 2e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -1
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 390 GMXILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 211
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 210 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 97
Score = 110 bits (234), Expect = 3e-023
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1 / -3
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 367 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 188
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 187 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 68
>gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell culture Medicago truncatula cDNA
clone NF080B09EC 5', mRNA sequence
Length = 656
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 182 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 361
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 362 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 460
Score = 161 bits (346), Expect = 1e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -3
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 474 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 295
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 294 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 181
Score = 110 bits (234), Expect = 3e-023
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1 / -2
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 451 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 272
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 271 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 152
>gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell culture Medicago truncatula cDNA
clone NF097B10EC 5', mRNA sequence
Length = 664
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 175 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 354
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 355 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 453
Score = 161 bits (346), Expect = 1e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -3
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 467 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 288
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 287 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 174
Score = 110 bits (234), Expect = 3e-023
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1 / -2
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 444 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 265
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 264 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 145
>gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Medicago truncatula cDNA clone
NF085B07IN 5', mRNA sequence
Length = 651
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 187 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 366
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 367 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 465
Score = 161 bits (346), Expect = 1e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -2
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 479 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 300
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 299 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 186
Score = 110 bits (234), Expect = 3e-023
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1 / -1
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 456 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 277
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 276 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 157
>gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cDNA clone pKV2-51F16, mRNA
sequence
Length = 544
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 80 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 259
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 260 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 358
Score = 161 bits (346), Expect = 1e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -2
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 372 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 193
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 192 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 79
Score = 105 bits (225), Expect = 5e-022
Identities = 46/96 (47%), Positives = 64/96 (66%)
Frame = +1 / -1
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 349 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 170
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFL 585
+L VV ID+NL VV +THH Y +FLFL L
Sbjct: 169 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLIL 62
>gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula cDNA clone mt--abc955109g05,
mRNA sequence
Length = 623
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 87 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 266
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 267 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 365
Score = 161 bits (346), Expect = 1e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -2
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 379 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 200
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 199 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 86
Score = 110 bits (234), Expect = 3e-023
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1 / -1
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 356 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 177
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 176 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 57
>gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 522
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 139 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 318
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 319 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 417
Score = 161 bits (346), Expect = 1e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -2
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 431 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 252
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 251 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 138
Score = 110 bits (234), Expect = 3e-023
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1 / -1
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 408 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 229
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 228 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 109
>gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula cDNA clone MTYAH63, mRNA
sequence
Length = 756
Score = 215 bits (464), Expect = 6e-055
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 166 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 345
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 346 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 444
Score = 161 bits (346), Expect = 1e-038
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = +2 / -2
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 458 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 279
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 278 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 165
Score = 110 bits (234), Expect = 3e-023
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1 / -1
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH ADE+ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 435 GVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 256
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 255 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 136
>gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved leaf Medicago truncatula cDNA
clone NF067D09PL 5', mRNA sequence
Length = 683
Score = 208 bits (448), Expect = 9e-053
Identities = 88/93 (94%), Positives = 90/93 (96%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 129 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDR ISKMFLRGDSVIIVLRN K*+
Sbjct: 309 KKKAQPVNKDRXISKMFLRGDSVIIVLRNXK*A 407
Score = 157 bits (338), Expect = 1e-037
Identities = 73/98 (74%), Positives = 78/98 (79%)
Frame = +2 / -2
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +L FL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 421 GMEILAYLXFLRTMMTESPRRNILLMXRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 242
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 241 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 128
Score = 107 bits (228), Expect = 2e-022
Identities = 47/100 (47%), Positives = 65/100 (65%)
Frame = +1 / -1
Query: 298 GVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTNPA 477
GVP+++DDR++ +EH AD +ILV SLL + L L PH P + ++H+ V+IKS + A
Sbjct: 398 GVPKNNDDRISTKEHFADXTILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDTA 219
Query: 478 KQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLI 597
+L VV ID+NL VV +THH Y +FLFL LP I
Sbjct: 218 *KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSI 99
>gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell culture Medicago truncatula cDNA
clone NF061F08EC 5', mRNA sequence
Length = 682
Score = 205 bits (443), Expect = 5e-052
Identities = 86/93 (92%), Positives = 89/93 (95%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+ GPLSVL MSV+NNTQVLINCRNNKKLLGRV AFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 157 FNIGPLSVLYMSVRNNTQVLINCRNNKKLLGRVMAFDRHCNMVLENVREMWTEVPKTGKG 336
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 337 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*T 435
Score = 154 bits (331), Expect = 1e-036
Identities = 70/92 (76%), Positives = 75/92 (81%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
+LGFL TMMTESP RNILLMNLSLFTG AFF PLPV GTSVHIS TFS T+LQ SKA T
Sbjct: 431 YLGFLRTMMTESPRRNILLMNLSLFTG*AFFFPLPVFGTSVHISLTFSRTILQCLSKAMT 252
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQ + T VLFLTL+ STD GP+LN
Sbjct: 251 RPRSFLLFRQFISTCVLFLTLM*STDSGPMLN 156
>gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula cDNA clone MtTA01H10S6, mRNA
sequence
Length = 468
Score = 201 bits (434), Expect = 8e-051
Identities = 85/89 (95%), Positives = 86/89 (96%)
Frame = -1 / +2
Query: 555 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 376
P VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA
Sbjct: 2 PGQVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 181
Query: 375 LPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 182 QPVNKDRFISKMFLRGDSVIIVLRNPK*A 268
Score = 147 bits (315), Expect = 2e-034
Identities = 69/94 (73%), Positives = 74/94 (78%)
Frame = +2 / -1
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 282 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 103
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRG 556
SKA TRP SFLLLRQL+RT VLF TLI+ST G
Sbjct: 102 LSKALTRPRSFLLLRQLIRTCVLFFTLIMSTCPG 1
>gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula cDNA clone MtBB22A12 T3, mRNA
sequence
Length = 464
Score = 200 bits (431), Expect = 2e-050
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = -1 / +2
Query: 546 VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPV 367
VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA PV
Sbjct: 2 VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPV 181
Query: 366 NKDRFISKMFLRGDSVIIVLRNPK*S 289
NKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 182 NKDRFISKMFLRGDSVIIVLRNPK*A 259
Score = 146 bits (314), Expect = 3e-034
Identities = 68/91 (74%), Positives = 73/91 (80%)
Frame = +2 / -3
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 273 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 94
Query: 455 RSKARTRPSSFLLLRQLMRTWVLFLTLIIST 547
SKA TRP SFLLLRQL+RT VLF TLI+ST
Sbjct: 93 LSKALTRPRSFLLLRQLIRTCVLFFTLIMST 1
>gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula cDNA clone MTYBA66, mRNA
sequence
Length = 754
Score = 173 bits (373), Expect(2) = 9e-049
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLM SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 159 FNTGPLSVLMRSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 338
Query: 387 KKKALPVNKDRFISKM 340
KKKA PVNKDRFIS +
Sbjct: 339 KKKAQPVNKDRFISNV 386
Score = 127 bits (272), Expect(2) = 3e-033
Identities = 58/75 (77%), Positives = 62/75 (82%)
Frame = +2 / -1
Query: 344 LLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVL 523
LLM SL TG AFF PLPVLGTSVHISRTFS T+LQ SKA TRP SFLLLRQL+RT VL
Sbjct: 382 LLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALTRPRSFLLLRQLIRTCVL 203
Query: 524 FLTLIISTDRGPVLN 568
F TL++STD GPVLN
Sbjct: 202 FFTLLMSTDSGPVLN 158
Score = 41.4 bits (84), Expect(2) = 9e-049
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -1 / +1
Query: 348 SKMFLRGDSVIIVLRNPK*S 289
S MFLRGDSVIIVLRNPK*+
Sbjct: 376 SAMFLRGDSVIIVLRNPK*A 435
Score = 35.9 bits (72), Expect(2) = 3e-033
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / -3
Query: 275 GFRLGDHLGFLSTMMTESPLRNI 343
G + +LGFL TMMTESP RNI
Sbjct: 449 GMEILAYLGFLRTMMTESPRRNI 381
>gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 365
Score = 185 bits (398), Expect = 7e-046
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 132 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 311
Query: 387 KKKALPVNKDRFISKMFL 334
KKKA PVNKDRFISKMFL
Sbjct: 312 KKKAQPVNKDRFISKMFL 365
Score = 135 bits (289), Expect = 8e-031
Identities = 62/78 (79%), Positives = 65/78 (83%)
Frame = +2 / -2
Query: 335 RNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ SKA TRP SFLLLRQL+RT
Sbjct: 364 RNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALTRPRSFLLLRQLIRT 185
Query: 515 WVLFLTLIISTDRGPVLN 568
VLF TLI+STD GPVLN
Sbjct: 184 CVLFFTLIMSTDSGPVLN 131
>gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula cDNA clone pHOGA-18D13 5' end,
mRNA sequence
Length = 508
Score = 174 bits (374), Expect = 2e-042
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = -1 / +3
Query: 516 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 337
+VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA PVNKDRFISKMF
Sbjct: 9 RVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMF 188
Query: 336 LRGDSVIIVLRNPK*S 289
LRGDSVIIVLR+PK*+
Sbjct: 189 LRGDSVIIVLRSPK*A 236
Score = 127 bits (273), Expect = 1e-028
Identities = 59/80 (73%), Positives = 63/80 (78%)
Frame = +2 / -1
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQW 454
G + +LG L TMMTESP RNILLM SL TG AFF PLPVLGTSVHISRTFS T+LQ
Sbjct: 250 GMEILAYLGLLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQC 71
Query: 455 RSKARTRPSSFLLLRQLMRT 514
SKA TRP SFLLLRQL+RT
Sbjct: 70 LSKALTRPRSFLLLRQLIRT 11
>gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 110967
Score = 97.7 bits (207), Expect(2) = 1e-040
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1 / -1
Query: 543 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
LM+ ++ QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 99852 LMLILQTPMQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 99715
Score = 90.0 bits (190), Expect(2) = 1e-040
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -1 / -1
Query: 411 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*S 289
+VPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK*+
Sbjct: 99618 QVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*A 99496
Score = 72.1 bits (151), Expect(3) = 1e-028
Identities = 32/45 (71%), Positives = 34/45 (75%)
Frame = +2 / +2
Query: 275 GFRLGDHLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
G + +LGFL TMMTESP RNILLM SL TG AFF PLPVLGT
Sbjct: 99482 GMEILAYLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGT 99616
Score = 65.7 bits (137), Expect(3) = 1e-028
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +2 / +2
Query: 398 VLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWV 520
+L TSVHISRTFS T+LQ SKA TRP SFLLLRQL+RT +
Sbjct: 99707 MLHTSVHISRTFSRTILQCLSKALTRPRSFLLLRQLIRTCI 99829
Score = 27.6 bits (54), Expect(3) = 1e-028
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 514 LGVVLNTHH*Y*QRACAKFLFLFLP 588
L VV +THH Y +FLFL LP
Sbjct: 99918 LCVVFHTHHEYR*WTSVEFLFLILP 99992
>gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower Medicago truncatula cDNA clone
NF020H02FL 5', mRNA sequence
Length = 354
Score = 138 bits (297), Expect = 6e-032
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGK 391
F+TGPLSVLMMSVKNNTQVLIN RNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGK
Sbjct: 178 FNTGPLSVLMMSVKNNTQVLINXRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGK 354
Score = 105 bits (225), Expect = 5e-022
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +2 / -2
Query: 392 LPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
LPVLGTSVHISRTFS T+LQ SKA TRP SFLLLRQL+RT VLF TLI+STD GPVLN
Sbjct: 353 LPVLGTSVHISRTFSRTILQCLSKALTRPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLN 177
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 616,472,007
Number of Sequences: 392609
Number of extensions: 8019908
Number of successful extensions: 38645
Number of sequences better than 1.0e-020: 25
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21931559430
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)