TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131572.2.6
         (1100 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BQ165539.1|BQ165539  EST611408 KVKC Medicago truncatula c...    66   3e-023
gb|CB894426.1|CB894426  EST647218 HOGA Medicago truncatula c...    64   1e-021
gb|AW560370.1|AW560370  EST315418 DSIR Medicago truncatula c...    66   3e-021
gb|AL388318.1|AL388318  MtBC47H04F1 MtBC Medicago truncatula...    66   3e-021

>gb|BQ165539.1|BQ165539 EST611408 KVKC Medicago truncatula cDNA clone pKVKC-10A2, mRNA
           sequence
          Length = 762

 Score = 66.1 bits (138), Expect(3) = 3e-023
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +2 / -1

                                                                     
Query: 638 LETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
           +E QL  D+ MM +  G++ +EKEW  LF  AGFS YKI    G +   EV+P*  YL
Sbjct: 369 IEAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP*YKYL 196




 Score = 57.4 bits (119), Expect(3) = 3e-023
 Identities = 24/59 (40%), Positives = 35/59 (59%)
 Frame = +2 / -1

                                                                      
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 619
           + YV GDMF  IPP  +           DEEC+K+L +C++AI ++   GKVII D ++
Sbjct: 573 LKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVM 397




 Score = 24.4 bits (47), Expect(3) = 3e-023
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2 / -1

                         
Query: 353 RAIAKAFPHIKCTV 394
           + IAK+FP+I+C V
Sbjct: 660 KVIAKSFPNIECIV 619



>gb|CB894426.1|CB894426 EST647218 HOGA Medicago truncatula cDNA clone HOGA-31K19, mRNA
           sequence
          Length = 817

 Score = 64.3 bits (134), Expect(2) = 1e-021
 Identities = 26/56 (46%), Positives = 37/56 (66%)
 Frame = +2 / +3

                                                                   
Query: 638 LETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
           +ETQL  D+ MM +  G++ ++KEW +L + AGFS+YKI    G R   E+YP* I
Sbjct: 465 VETQLFFDMLMMVVLAGKERNKKEWIKLISSAGFSDYKITPILGLRSLIEIYP*HI 632




 Score = 60.6 bits (126), Expect(2) = 1e-021
 Identities = 25/60 (41%), Positives = 34/60 (56%)
 Frame = +2 / +3

                                                                       
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
           +NYV GDMF  IPP              DEECVK+L  C+ AI  +   GKVI+ D++++
Sbjct: 258 LNYVGGDMFKEIPPTDAILLKWILHDWNDEECVKILKNCKDAISKKGKQGKVIVIDMVLE 437



>gb|AW560370.1|AW560370 EST315418 DSIR Medicago truncatula cDNA clone pDSIR-26L24, mRNA
           sequence
          Length = 619

 Score = 66.1 bits (138), Expect(2) = 3e-021
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +2 / -3

                                                                     
Query: 638 LETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
           +E QL  D+ MM +  G++ +EKEW  LF  AGFS YKI    G +   EV+P*  YL
Sbjct: 377 IEAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP*YKYL 204




 Score = 57.4 bits (119), Expect(2) = 3e-021
 Identities = 24/59 (40%), Positives = 35/59 (59%)
 Frame = +2 / -3

                                                                      
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 619
           + YV GDMF  IPP  +           DEEC+K+L +C++AI ++   GKVII D ++
Sbjct: 581 LKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVM 405



>gb|AL388318.1|AL388318 MtBC47H04F1 MtBC Medicago truncatula cDNA clone MtBC47H04 T3, mRNA
           sequence
          Length = 477

 Score = 66.1 bits (138), Expect(2) = 3e-021
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +2 / +3

                                                                     
Query: 638 LETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
           +E QL  D+ MM +  G++ +EKEW  LF  AGFS YKI    G +   EV+P*  YL
Sbjct: 243 IEAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP*YKYL 416




 Score = 57.4 bits (119), Expect(2) = 3e-021
 Identities = 24/59 (40%), Positives = 35/59 (59%)
 Frame = +2 / +3

                                                                      
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 619
           + YV GDMF  IPP  +           DEEC+K+L +C++AI ++   GKVII D ++
Sbjct: 39  LKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVM 215



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 1,110,840,220
Number of Sequences: 392609
Number of extensions: 17309668
Number of successful extensions: 197234
Number of sequences better than 1.0e-020: 4
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 39077409996
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)