TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131572.2.3
(1521 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC139852.10| Medicago truncatula clone mth2-8n13, WORKIN... 65 2e-028
gb|AC147536.11| Medicago truncatula clone mth2-9l3, complet... 81 5e-027
gb|AC146757.19| Medicago truncatula clone mth2-16n21, compl... 81 7e-027
gb|AC140068.18| Medicago truncatula clone mth2-15l24, compl... 64 1e-024
gb|BQ165539.1|BQ165539 EST611408 KVKC Medicago truncatula c... 66 2e-023
gb|CA919746.1|CA919746 EST637464 MTUS Medicago truncatula c... 59 7e-022
gb|AW329216.2|AW329216 N200428e rootphos(-) Medicago trunca... 78 7e-022
gb|CB894426.1|CB894426 EST647218 HOGA Medicago truncatula c... 63 3e-021
gb|AW560370.1|AW560370 EST315418 DSIR Medicago truncatula c... 66 5e-021
gb|AL388318.1|AL388318 MtBC47H04F1 MtBC Medicago truncatula... 66 5e-021
gb|AC123575.10| Medicago truncatula clone mth1-31p6, comple... 61 6e-021
>gb|AC139852.10| Medicago truncatula clone mth2-8n13, WORKING DRAFT SEQUENCE, 10 ordered
pieces
Length = 154519
Score = 65.2 bits (136), Expect(4) = 2e-028
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = -1 / +3
Query: 507 ETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+ +L+MDI MM G++R EKEW+ LF +AGF +YKI F EVYP*
Sbjct: 22371 QQNLIMDINMMAFDGGKERTEKEWNHLFIEAGFKDYKIFPLFSYESLIEVYP* 22529
Score = 58.3 bits (121), Expect(4) = 2e-028
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = -1 / +3
Query: 1407 ELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPFX 1228
EL + Q+ ++ + L P+SL+CAV+L IP IY HG + +LV+ L +P AK
Sbjct: 3786 ELFQGQSLLYTHMYASLKPMSLKCAVQLNIPEIIYNHGKPITLPDLVSTLKVPLAKSSLV 3965
Query: 1227 XXXXXXLAASGVFTVDRQSTEE 1162
LA G+F + + ++
Sbjct: 3966 KRLMRFLAHIGIFAIHGKGEDD 4031
Score = 52.8 bits (109), Expect(4) = 1e-022
Identities = 25/94 (26%), Positives = 48/94 (51%)
Frame = -1 / +3
Query: 1440 MASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTA 1261
MAS + EL + Q+ ++ +L ++L+ A++L IP IY HG + ++LV+
Sbjct: 31887 MASTNNQLEATELFEGQSLLYMHMFGFLKSMALKWAIQLNIPDIIYNHGKPITLSDLVST 32066
Query: 1260 LSLPSAKLPFXXXXXXXLAASGVFTVDRQSTEEE 1159
L +P +K LA +G+F + + ++
Sbjct: 32067 LQVPISKQSLVERLMRFLAHNGIFVIHEKGENDD 32168
Score = 51.9 bits (107), Expect(4) = 1e-022
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = -1 / +2
Query: 480 MMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+M G++R KEW LF +AGF +YKI FG R E YP*
Sbjct: 33431 IMMGINGKERTGKEWKHLFVEAGFKDYKIFPLFGFRSLIEAYP* 33562
Score = 49.6 bits (102), Expect(4) = 2e-028
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -1 / +3
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADGAMINYVEGDMFSFIPPA 661
G+ A+ I +AFP +KC V P ++A + ++YV GD+F IP A
Sbjct: 4362 GNGTTAKIICEAFPKVKCLVFDVPHVVANSSCESQNVSYVGGDIFKSIPKA 4514
Score = 47.3 bits (97), Expect(4) = 1e-022
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -1 / +3
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADGAMINYVEGDMFSFIPPA 661
G AR I +AFP +KC V P+++A + ++YV GDMF IP A
Sbjct: 32502 GTGTTARIICEAFPKLKCVVYDLPQVVANLSSACDNLSYVGGDMFKSIPQA 32654
Score = 41.4 bits (84), Expect(4) = 1e-022
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -1 / +2
Query: 624 TDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
TDE C+K+L C++++ S GKVII DI+I+
Sbjct: 33281 TDEICIKILKTCKESVSSNGKKGKVIIMDIIIN 33379
Score = 40.5 bits (82), Expect(4) = 2e-028
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -1 / +1
Query: 624 TDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
+DE C+K+L C+ ++ S+ GKVII DI+I+
Sbjct: 6712 SDENCIKILKTCKDSVSSKGRKGKVIIIDILIN 6810
>gb|AC147536.11| Medicago truncatula clone mth2-9l3, complete sequence
Length = 111486
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 39/101 (38%), Positives = 56/101 (55%)
Frame = -1 / -3
Query: 1410 AELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPF 1231
+EL + QA ++ S+L P+S++ AVELGIP I HG + ELV+AL +P AK
Sbjct: 67717 SELFEVQAHLYNQLFSFLRPVSIKWAVELGIPDIIQNHGKPITLPELVSALRIPEAKAGC 67538
Query: 1230 XXXXXXXLAASGVFTVDRQSTEEERYRISPVSYLLVDGIPH 1108
LA + +F + + +E Y +SP S LLV G H
Sbjct: 67537 VHSVMRLLAHNKIFAIVKIDDNKEAYALSPTSKLLVKGTDH 67415
Score = 54.7 bits (113), Expect(3) = 5e-027
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -1 / -1
Query: 507 ETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEV 358
E L DI MM R+RDEK W ++ T+AGF YKI FG R E+
Sbjct: 56673 EVKLCFDITMMANHNSRERDEKTWKKIITEAGFMSYKIFPIFGFRSLIEL 56524
Score = 45.5 bits (93), Expect(3) = 5e-027
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -1 / -1
Query: 621 DEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
D++CVK+L +C++A +K GGKVII DI+I+
Sbjct: 56796 DDDCVKILKKCKEAASRQKKGGKVIIIDIVIN 56701
>gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete sequence
Length = 135915
Score = 81.3 bits (171), Expect(3) = 7e-027
Identities = 39/101 (38%), Positives = 56/101 (55%)
Frame = -1 / -3
Query: 1410 AELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPF 1231
+EL + QA ++ S+L P+S++ AVELGIP I HG + ELV+AL +P AK
Sbjct: 92149 SELFEVQAHLYNQLFSFLRPVSIKWAVELGIPDIIQNHGKPITLPELVSALRIPEAKAGC 91970
Query: 1230 XXXXXXXLAASGVFTVDRQSTEEERYRISPVSYLLVDGIPH 1108
LA + +F + + +E Y +SP S LLV G H
Sbjct: 91969 VHSVMRLLAHNKIFAIVKIDDNKEAYALSPTSKLLVKGTDH 91847
Score = 54.7 bits (113), Expect(3) = 7e-027
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -1 / -2
Query: 507 ETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEV 358
E L DI MM R+RDEK W ++ T+AGF YKI FG R E+
Sbjct: 81104 EVKLCFDITMMANHNSRERDEKTWKKIITEAGFMSYKIFPIFGFRSLIEL 80955
Score = 45.5 bits (93), Expect(3) = 7e-027
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 621 DEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
D++CVK+L +C++A +K GGKVII DI+I+
Sbjct: 81227 DDDCVKILKKCKEAASRQKKGGKVIIIDIVIN 81132
>gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete sequence
Length = 111620
Score = 64.3 bits (134), Expect(3) = 9e-022
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -1 / -2
Query: 510 LETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP*D 346
+ET L D+ MM + G++R+EKEW +L + AGF++YKI G R E+YP*+
Sbjct: 18070 VETQLFFDMLMMALLTGKERNEKEWMKLISLAGFNDYKITPILGLRSMIEIYP*N 17906
Score = 63.4 bits (132), Expect(4) = 1e-021
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -1 / -1
Query: 510 LETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+ET L D+ MM + G++R++KEW +L + AGFS+YKI G R E+YP*
Sbjct: 26480 VETQLFFDMLMMVVLAGKERNKKEWIKLISSAGFSDYKITPILGLRSLIEIYP* 26319
Score = 60.6 bits (126), Expect(5) = 1e-024
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -1 / -1
Query: 507 ETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+T L D+ MM + G++R +KEW +L + AGF++YKI G R E+YP*
Sbjct: 15143 KTQLFFDMLMMVLATGKERTKKEWVKLISSAGFNDYKITPVLGLRSVIEIYP* 14985
Score = 60.6 bits (126), Expect(5) = 1e-024
Identities = 24/75 (32%), Positives = 45/75 (60%)
Frame = -1 / -3
Query: 1410 AELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPF 1231
+ LLKAQ+ IW+ +++ +SL+C V+LGIP I+ +G S ++L+++L + K +
Sbjct: 46902 SNLLKAQSHIWKHIFNFINSMSLKCVVDLGIPDIIHNYGRPMSLSKLISSLPINPTKTCY 46723
Query: 1230 XXXXXXXLAASGVFT 1186
+ SG+F+
Sbjct: 46722 FHRLIRIMTYSGIFS 46678
Score = 59.3 bits (123), Expect(3) = 9e-022
Identities = 22/69 (31%), Positives = 44/69 (63%)
Frame = -1 / -3
Query: 1446 LAMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELV 1267
++M S+ + + LLKAQ+ +W +++ +SL+C V+LGIP I+ +G ++L+
Sbjct: 19965 VSMESQNIEQVASNLLKAQSHVWNHMFNFINSMSLKCVVDLGIPDIIHNYGKPIPLSKLI 19786
Query: 1266 TALSLPSAK 1240
++LS+ +K
Sbjct: 19785 SSLSIHPSK 19759
Score = 56.1 bits (116), Expect(4) = 1e-021
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = -1 / -2
Query: 1410 AELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPF 1231
+ LLKAQ+ IW +++ +SL+C V+LGIP I+ +G S ++L++ L + +K F
Sbjct: 28363 SNLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDIIHNYGKPISLSKLISLLPIHPSKTCF 28184
Score = 41.8 bits (85), Expect(5) = 1e-024
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 621 DEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
DEECVK+L C+ AI + GKVII D++++
Sbjct: 15266 DEECVKILRNCKDAIAKKGKEGKVIIIDMVVE 15171
Score = 40.9 bits (83), Expect(4) = 1e-021
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 621 DEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
DEECVK+L C+ AI + GKVI+ D++++
Sbjct: 26603 DEECVKILKNCKDAISKKGKQGKVIVIDMVLE 26508
Score = 40.0 bits (81), Expect(3) = 9e-022
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 621 DEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
DE+C+K+L C+ AI + GKV+I D+++D
Sbjct: 18193 DEQCLKILKNCKDAISKKGKEGKVVIIDMVLD 18098
Score = 30.9 bits (61), Expect(5) = 1e-024
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 714 GAMINYVEGDMFSFIPPA 661
G +NYV GDMF IPPA
Sbjct: 16288 GDNLNYVGGDMFKRIPPA 16235
Score = 29.9 bits (59), Expect(5) = 1e-024
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1 / -2
Query: 798 ARAIVKAFPHIKCTVLAPPKII 733
A+A+ K+FP ++CTV P ++
Sbjct: 16369 AKALAKSFPQLECTVFDLPHVV 16304
Score = 28.1 bits (55), Expect(4) = 1e-021
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 705 INYVEGDMFSFIPP 664
+NYV GDMF IPP
Sbjct: 27682 LNYVGGDMFKEIPP 27641
>gb|BQ165539.1|BQ165539 EST611408 KVKC Medicago truncatula cDNA clone pKVKC-10A2, mRNA
sequence
Length = 762
Score = 66.1 bits (138), Expect(3) = 2e-023
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -1 / -1
Query: 510 LETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+E L D+ MM + G++R+EKEWS LF AGFS YKI G + EV+P*
Sbjct: 369 IEAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 208
Score = 57.4 bits (119), Expect(3) = 2e-023
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -1 / -1
Query: 705 INYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 529
+ YV GDMF IPP + DEEC+K+L +C++AI ++ GKVII D ++
Sbjct: 573 LKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVM 397
Score = 25.8 bits (50), Expect(3) = 2e-023
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1 / -1
Query: 795 RAIVKAFPHIKCTVLAPPKII 733
+ I K+FP+I+C V P ++
Sbjct: 660 KVIAKSFPNIECIVFDLPHVV 598
>gb|CA919746.1|CA919746 EST637464 MTUS Medicago truncatula cDNA clone MTUS-17E5, mRNA
sequence
Length = 560
Score = 58.8 bits (122), Expect(3) = 7e-022
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -1 / -2
Query: 513 MLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+ E L D+ MMT+ G++R++KEW +L AGFS YKI G + EVYP*
Sbjct: 271 LTELQLHFDMVMMTLHNGKEREKKEWKKLIYDAGFSSYKITPICGFKSLIEVYP* 107
Score = 50.6 bits (104), Expect(3) = 7e-022
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = -1 / -2
Query: 705 INYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
+N+V GDMF IPPA DE +K+L ++AI + GK+II DI ID
Sbjct: 472 LNFVGGDMFKSIPPADAVLLKWVLHDWDDELSLKILNNSKEAISGKGKKGKIIIIDISID 293
Query: 525 HS 520
+
Sbjct: 292 ET 287
Score = 34.5 bits (69), Expect(3) = 7e-022
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 795 RAIVKAFPHIKCTVLAPPKIIA 730
+ I + FPHIKCTVL P+++A
Sbjct: 559 KLIHEEFPHIKCTVLDQPQVVA 494
>gb|AW329216.2|AW329216 N200428e rootphos(-) Medicago truncatula cDNA clone MHRP-17E8, mRNA
sequence
Length = 614
Score = 78.0 bits (164), Expect(2) = 7e-022
Identities = 35/90 (38%), Positives = 51/90 (56%)
Frame = -1 / -1
Query: 795 RAIVKAFPHIKCTVLAPPKIIATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDE 616
R I +AFP +KC V P+++A + ++YV GDMF IP A TDE
Sbjct: 587 RIICEAFPKLKCVVYDLPQVVANLSSACDNLSYVGGDMFKSIPQADAIMLKWILHDWTDE 408
Query: 615 ECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
C+K+L C++++ S GKVII DI+I+
Sbjct: 407 ICIKILKTCKESVSSNGKKGKVIIMDIIIN 318
Score = 48.3 bits (99), Expect(2) = 7e-022
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -1 / -1
Query: 480 MMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+M G++R KEW LF +AGF +YKI F R E YP*
Sbjct: 266 IMMGINGKERTGKEWKHLFVEAGFKDYKIFPLFENRSLIEAYP* 135
>gb|CB894426.1|CB894426 EST647218 HOGA Medicago truncatula cDNA clone HOGA-31K19, mRNA
sequence
Length = 817
Score = 63.4 bits (132), Expect(2) = 3e-021
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -1 / +3
Query: 510 LETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+ET L D+ MM + G++R++KEW +L + AGFS+YKI G R E+YP*
Sbjct: 465 VETQLFFDMLMMVVLAGKERNKKEWIKLISSAGFSDYKITPILGLRSLIEIYP* 626
Score = 60.6 bits (126), Expect(2) = 3e-021
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = -1 / +3
Query: 705 INYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
+NYV GDMF IPP DEECVK+L C+ AI + GKVI+ D++++
Sbjct: 258 LNYVGGDMFKEIPPTDAILLKWILHDWNDEECVKILKNCKDAISKKGKQGKVIVIDMVLE 437
>gb|AW560370.1|AW560370 EST315418 DSIR Medicago truncatula cDNA clone pDSIR-26L24, mRNA
sequence
Length = 619
Score = 66.1 bits (138), Expect(2) = 5e-021
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -1 / -3
Query: 510 LETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+E L D+ MM + G++R+EKEWS LF AGFS YKI G + EV+P*
Sbjct: 377 IEAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 216
Score = 57.4 bits (119), Expect(2) = 5e-021
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -1 / -3
Query: 705 INYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 529
+ YV GDMF IPP + DEEC+K+L +C++AI ++ GKVII D ++
Sbjct: 581 LKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVM 405
>gb|AL388318.1|AL388318 MtBC47H04F1 MtBC Medicago truncatula cDNA clone MtBC47H04 T3, mRNA
sequence
Length = 477
Score = 66.1 bits (138), Expect(2) = 5e-021
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = -1 / +3
Query: 510 LETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP* 349
+E L D+ MM + G++R+EKEWS LF AGFS YKI G + EV+P*
Sbjct: 243 IEAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 404
Score = 57.4 bits (119), Expect(2) = 5e-021
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -1 / +3
Query: 705 INYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 529
+ YV GDMF IPP + DEEC+K+L +C++AI ++ GKVII D ++
Sbjct: 39 LKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVM 215
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence
Length = 83007
Score = 60.6 bits (126), Expect(3) = 6e-021
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = -1 / +2
Query: 1410 AELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPF 1231
+ LLKAQ+ +W +++ +SL+C V+LGIP I+ HG ++L+++L + +K P
Sbjct: 9821 SNLLKAQSHVWNHIFNFINSMSLKCVVDLGIPDIIHNHGKPMPISKLISSLPIHPSKKPC 10000
Query: 1230 XXXXXXXLAASGVFTVDRQSTEE 1162
+ SG F+ + E
Sbjct: 10001 IHRLMRIMTHSGFFSQQNIAANE 10069
Score = 56.5 bits (117), Expect(3) = 6e-021
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = -1 / +3
Query: 510 LETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVY 355
+ET L D+ MM G++R +KEW +L + AGF +YKI G R E+Y
Sbjct: 11220 VETKLFFDMLMMVTLTGKERTKKEWVKLISSAGFCDYKITPILGLRAVIEIY 11375
Score = 42.8 bits (87), Expect(3) = 6e-021
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 621 DEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 526
DEECVK+L C+ AI + GKV+I D+++D
Sbjct: 11097 DEECVKILKNCKDAISKKGKEGKVVIIDMVLD 11192
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,392,014,741
Number of Sequences: 392609
Number of extensions: 21061201
Number of successful extensions: 366806
Number of sequences better than 1.0e-020: 12
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 56366202150
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)