TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131555.2.3
         (622 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CA989383.1|CA989383  EST642891 GLSD Medicago truncatula c...   149   3e-035
gb|CA920266.1|CA920266  EST637984 MTUS Medicago truncatula c...   149   4e-035
gb|CA858538.1|CA858538  EST635793 GLSD Medicago truncatula c...   147   2e-034
gb|AL388938.1|AL388938  MtBC51G01F1 MtBC Medicago truncatula...   120   2e-026

>gb|CA989383.1|CA989383 EST642891 GLSD Medicago truncatula cDNA clone pGLSD-41I18, mRNA
           sequence
          Length = 829

 Score =  149 bits (321), Expect = 3e-035
 Identities = 62/117 (52%), Positives = 85/117 (72%)
 Frame = -3 / +3

                                                                       
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
           SS ++++      ++VEN LR +VDVRDV +A+LLAYE  EA GRYIC+SHAI   D++ 
Sbjct: 447 SSLVLVKLLKEGCDSVENKLRWIVDVRDVVNAILLAYENHEADGRYICTSHAIVTRDLVE 626

                                                                    
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN 270
            LK +YP+Y YP N++E D   + SSEKLQ LGW  +P+EE+L D+VESYK  G+L+
Sbjct: 627 RLKGIYPNYKYPTNYIEMDDYKMLSSEKLQSLGWKLRPLEETLIDSVESYKEAGLLS 797



>gb|CA920266.1|CA920266 EST637984 MTUS Medicago truncatula cDNA clone MTUS-25C6, mRNA
           sequence
          Length = 710

 Score =  149 bits (320), Expect = 4e-035
 Identities = 60/116 (51%), Positives = 84/116 (72%)
 Frame = -3 / -2

                                                                       
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
           SS  +++      +++EN LR +VDVRDV +A+LLAYE  +A GRYIC+SH I   D++ 
Sbjct: 523 SSLALIKILKEGHDSLENKLRWIVDVRDVVNAILLAYENHKADGRYICTSHTINTRDLVE 344

                                                                   
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGIL 273
            LK++YP+Y YP N++E D   + SSEKLQ LGW F+P+EE+L D+VESYK  G+L
Sbjct: 343 RLKSIYPNYKYPTNYIEMDDYKMLSSEKLQSLGWKFRPLEETLIDSVESYKEAGLL 176



>gb|CA858538.1|CA858538 EST635793 GLSD Medicago truncatula cDNA clone pGLSD-38E6, mRNA
           sequence
          Length = 701

 Score =  147 bits (315), Expect = 2e-034
 Identities = 58/103 (56%), Positives = 79/103 (76%)
 Frame = -3 / -1

                                                                       
Query: 581 ETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMINILKTLYPSYPYPK 402
           +++EN LR +VDVRDV +A+LLAYE  +A GRYIC+SH I   D++  LK++YP+Y YP 
Sbjct: 455 DSLENKLRWIVDVRDVVNAILLAYENHKADGRYICTSHTINTRDLVERLKSIYPNYKYPT 276

                                                      
Query: 401 NFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGIL 273
           N++E D   + SSEKLQ LGW F+P+EE+L D+VESYK  G+L
Sbjct: 275 NYIEMDDYKMLSSEKLQSLGWKFRPLEETLIDSVESYKEAGLL 147



>gb|AL388938.1|AL388938 MtBC51G01F1 MtBC Medicago truncatula cDNA clone MtBC51G01 T3, mRNA
           sequence
          Length = 421

 Score =  120 bits (257), Expect = 2e-026
 Identities = 46/82 (56%), Positives = 61/82 (74%)
 Frame = -3 / +1

                                                                       
Query: 518 LAYEKPEASGRYICSSHAIKVADMINILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGW 339
           LAYE  +A GRYIC+SH I   D++  LK++YP+Y YP N++E D   + SSEKLQ LGW
Sbjct: 16  LAYENHKADGRYICTSHTINTRDLVERLKSIYPNYKYPTNYIEMDDYKMLSSEKLQSLGW 195

                                 
Query: 338 SFKPIEESLRDTVESYKAFGIL 273
            F+P+EE+L D+VESYK  G+L
Sbjct: 196 KFRPLEETLIDSVESYKEAGLL 261



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 636,889,204
Number of Sequences: 392609
Number of extensions: 8542544
Number of successful extensions: 55293
Number of sequences better than 1.0e-020: 4
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19158603640
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)