TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131543.2.1
(634 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW329629.1|AW329629 N200889e rootphos(-) Medicago trunca... 124 1e-027
gb|AL377900.1|AL377900 MtBB34F10F1 MtBB Medicago truncatula... 124 1e-027
gb|AL377901.1|AL377901 MtBB34F10R1 MtBB Medicago truncatula... 124 1e-027
gb|AL377934.1|AL377934 MtBB34H08F1 MtBB Medicago truncatula... 124 1e-027
gb|AL377935.1|AL377935 MtBB34H08R1 MtBB Medicago truncatula... 124 1e-027
gb|AL381163.1|AL381163 MtBB57C08F1 MtBB Medicago truncatula... 124 1e-027
gb|AL381164.1|AL381164 MtBB57C08R1 MtBB Medicago truncatula... 124 1e-027
gb|AL388578.1|AL388578 MtBC49E02F1 MtBC Medicago truncatula... 124 1e-027
gb|BG457047.1|BG457047 NF069A08PL1F1055 Phosphate starved l... 124 1e-027
gb|BI264033.1|BI264033 NF113F02PL1F1027 Phosphate starved l... 124 1e-027
gb|BI264320.1|BI264320 NF118G02PL1F1020 Phosphate starved l... 124 1e-027
gb|BQ150120.1|BQ150120 NF008E07LF1F1054 Developing leaf Med... 124 1e-027
gb|CX520493.1|CX520493 s13dNF55D10VI080_448772 Virus-Infect... 124 1e-027
gb|CX539905.1|CX539905 s13dNF0FE08GS055_463082 Germinating ... 124 1e-027
gb|DW017375.1|DW017375 EST1226336 MTY Medicago truncatula c... 124 1e-027
gb|AJ498678.1|AJ498678 AJ498678 MTPOSE Medicago truncatula ... 124 1e-027
gb|BQ149926.1|BQ149926 NF040A09LF1F1066 Developing leaf Med... 121 1e-026
gb|CX536563.1|CX536563 s13dNF24G10GS083_456300 Germinating ... 121 1e-026
gb|BI268734.1|BI268734 NF024G10GS1F1083 Germinating Seed Me... 120 2e-026
gb|BI272910.1|BI272910 NF098H01FL1F1015 Developing flower M... 111 8e-024
gb|AC126780.18| Medicago truncatula clone mth2-10n4, comple... 86 7e-023
gb|BI311882.1|BI311882 EST5313632 GESD Medicago truncatula ... 106 3e-022
gb|BG646768.1|BG646768 EST508387 HOGA Medicago truncatula c... 105 7e-022
gb|CF068747.1|CF068747 EST669468 MTUS Medicago truncatula c... 105 7e-022
gb|BQ150662.1|BQ150662 NF041F03LF1F1028 Developing leaf Med... 103 2e-021
>gb|AW329629.1|AW329629 N200889e rootphos(-) Medicago truncatula cDNA clone MHRP-22D2, mRNA
sequence
Length = 369
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +2
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 35 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 199
>gb|AL377900.1|AL377900 MtBB34F10F1 MtBB Medicago truncatula cDNA clone MtBB34F10 T3, mRNA
sequence
Length = 409
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +1
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 34 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 198
>gb|AL377901.1|AL377901 MtBB34F10R1 MtBB Medicago truncatula cDNA clone MtBB34F10 T7, mRNA
sequence
Length = 430
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +1
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 34 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKPNKKNG 198
>gb|AL377934.1|AL377934 MtBB34H08F1 MtBB Medicago truncatula cDNA clone MtBB34H08 T3, mRNA
sequence
Length = 308
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +2
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 23 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 187
>gb|AL377935.1|AL377935 MtBB34H08R1 MtBB Medicago truncatula cDNA clone MtBB34H08 T7, mRNA
sequence
Length = 343
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 27 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 191
>gb|AL381163.1|AL381163 MtBB57C08F1 MtBB Medicago truncatula cDNA clone MtBB57C08 T3, mRNA
sequence
Length = 436
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 33 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 197
>gb|AL381164.1|AL381164 MtBB57C08R1 MtBB Medicago truncatula cDNA clone MtBB57C08 T7, mRNA
sequence
Length = 458
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 33 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKPNKKNG 197
>gb|AL388578.1|AL388578 MtBC49E02F1 MtBC Medicago truncatula cDNA clone MtBC49E02 T3, mRNA
sequence
Length = 367
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +2
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 35 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 199
>gb|BG457047.1|BG457047 NF069A08PL1F1055 Phosphate starved leaf Medicago truncatula cDNA
clone NF069A08PL 5', mRNA sequence
Length = 441
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 42 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 206
>gb|BI264033.1|BI264033 NF113F02PL1F1027 Phosphate starved leaf Medicago truncatula cDNA
clone NF113F02PL 5', mRNA sequence
Length = 438
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 36 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 200
>gb|BI264320.1|BI264320 NF118G02PL1F1020 Phosphate starved leaf Medicago truncatula cDNA
clone NF118G02PL 5', mRNA sequence
Length = 424
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 42 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 206
>gb|BQ150120.1|BQ150120 NF008E07LF1F1054 Developing leaf Medicago truncatula cDNA clone
NF008E07LF 5', mRNA sequence
Length = 801
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +2
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 146 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 310
>gb|CX520493.1|CX520493 s13dNF55D10VI080_448772 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 421
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +1
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 37 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 201
>gb|CX539905.1|CX539905 s13dNF0FE08GS055_463082 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 418
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +1
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 34 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 198
>gb|DW017375.1|DW017375 EST1226336 MTY Medicago truncatula cDNA clone MTYAS84, mRNA
sequence
Length = 396
Score = 124 bits (266), Expect = 1e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 54 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 218
>gb|AJ498678.1|AJ498678 AJ498678 MTPOSE Medicago truncatula cDNA clone mt--acc955207d11,
mRNA sequence
Length = 436
Score = 124 bits (265), Expect = 1e-027
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNG+KKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 57 EMAKSKNHTAHNQSYKAHKNGVKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 221
>gb|BQ149926.1|BQ149926 NF040A09LF1F1066 Developing leaf Medicago truncatula cDNA clone
NF040A09LF 5', mRNA sequence
Length = 873
Score = 121 bits (259), Expect = 1e-026
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKRH TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 147 EMAKSKNHTAHNQSYKAHKNGIKKPKRHLHTSTKGMDPKFLRNQRYARKHNKKNG 311
>gb|CX536563.1|CX536563 s13dNF24G10GS083_456300 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 426
Score = 121 bits (258), Expect = 1e-026
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +3 / +3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKR R TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 42 EMAKSKNHTAHNQSYKAHKNGIKKPKRRRHTSTKGMDPKFLRNQRYARKHNKKNG 206
>gb|BI268734.1|BI268734 NF024G10GS1F1083 Germinating Seed Medicago truncatula cDNA clone
NF024G10GS 5', mRNA sequence
Length = 435
Score = 120 bits (257), Expect = 2e-026
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +3 / +2
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
EMAKSKNHTAHNQS+KAHKNGIKKPKR R TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 17 EMAKSKNHTAHNQSYKAHKNGIKKPKRXRHTSTKGMDPKFLRNQRYARKHNKKNG 181
>gb|BI272910.1|BI272910 NF098H01FL1F1015 Developing flower Medicago truncatula cDNA clone
NF098H01FL 5', mRNA sequence
Length = 260
Score = 111 bits (238), Expect = 8e-024
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = +3 / +2
Query: 141 KNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKS 287
KNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+
Sbjct: 53 KNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNXRYARKHNKKN 199
>gb|AC126780.18| Medicago truncatula clone mth2-10n4, complete sequence
Length = 139213
Score = 85.8 bits (181), Expect(2) = 7e-023
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3 / -3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGM 233
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKG+
Sbjct: 109664 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGV 109557
Score = 85.8 bits (181), Expect(2) = 7e-023
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3 / -3
Query: 126 EMAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGM 233
EMAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKG+
Sbjct: 114011 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGV 113904
Score = 42.3 bits (86), Expect(2) = 7e-023
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3 / -1
Query: 231 MDPKFLRNLRYSRKGNKKSG 290
MDPKFLRN RY+RK NKK+G
Sbjct: 109465 MDPKFLRNQRYARKHNKKNG 109406
Score = 42.3 bits (86), Expect(2) = 7e-023
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 231 MDPKFLRNLRYSRKGNKKSG 290
MDPKFLRN RY+RK NKK+G
Sbjct: 113793 MDPKFLRNQRYARKHNKKNG 113734
>gb|BI311882.1|BI311882 EST5313632 GESD Medicago truncatula cDNA clone pGESD15D16 5' end,
mRNA sequence
Length = 409
Score = 106 bits (227), Expect = 3e-022
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3 / +1
Query: 141 KNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
+ +TAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 43 EEYTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 192
>gb|BG646768.1|BG646768 EST508387 HOGA Medicago truncatula cDNA clone pHOGA-9B24 5' end,
mRNA sequence
Length = 404
Score = 105 bits (224), Expect = 7e-022
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +3 / +2
Query: 150 TAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
TAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 44 TAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 184
>gb|CF068747.1|CF068747 EST669468 MTUS Medicago truncatula cDNA clone MTUS-12A1, mRNA
sequence
Length = 367
Score = 105 bits (224), Expect = 7e-022
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +3 / +1
Query: 150 TAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
TAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 10 TAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 150
>gb|BQ150662.1|BQ150662 NF041F03LF1F1028 Developing leaf Medicago truncatula cDNA clone
NF041F03LF 5', mRNA sequence
Length = 836
Score = 103 bits (220), Expect = 2e-021
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +3 / +2
Query: 150 TAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSRKGNKKSG 290
+AHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+RK NKK+G
Sbjct: 173 SAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 313
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 465,030,595
Number of Sequences: 392609
Number of extensions: 4659240
Number of successful extensions: 37856
Number of sequences better than 1.0e-020: 27
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19662777420
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)