TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.8
(708 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ158962.1|BQ158962 NF096D02PL1F1016 Phosphate starved l... 122 9e-032
gb|BQ138926.1|BQ138926 NF009B09PH1F1074 Phoma-infected Medi... 122 9e-032
gb|BF650599.1|BF650599 NF098H07EC1F1062 Elicited cell cultu... 122 9e-032
gb|BQ156987.1|BQ156987 NF099D11IR1F1094 Irradiated Medicago... 122 9e-032
gb|BQ147288.1|BQ147288 NF038G08FL1F1068 Developing flower M... 122 9e-032
gb|BG455467.1|BG455467 NF059A09PL1F1067 Phosphate starved l... 122 9e-032
gb|BF650684.1|BF650684 NF095H12EC1F1102 Elicited cell cultu... 122 9e-032
gb|BI269926.1|BI269926 NF016D03IR1F1029 Irradiated Medicago... 125 7e-028
gb|AL377280.1|AL377280 MtBB30E04F1 MtBB Medicago truncatula... 122 6e-027
gb|AL378150.1|AL378150 MtBB36D03F1 MtBB Medicago truncatula... 122 6e-027
gb|AL386182.1|AL386182 MtBC33A08R1 MtBC Medicago truncatula... 122 6e-027
gb|AL389572.1|AL389572 MtBC55G10F1 MtBC Medicago truncatula... 122 6e-027
gb|BF635782.1|BF635782 NF039E11DT1F1084 Drought Medicago tr... 122 6e-027
gb|BI308544.1|BI308544 EST529954 GPOD Medicago truncatula c... 122 6e-027
gb|BI311023.1|BI311023 EST5312773 GESD Medicago truncatula ... 122 6e-027
gb|BI312231.1|BI312231 EST5313981 GESD Medicago truncatula ... 122 6e-027
gb|BQ135944.1|BQ135944 NF026A07EC1F1053 Elicited cell cultu... 122 6e-027
gb|AJ501900.1|AJ501900 AJ501900 MTAMP Medicago truncatula c... 122 6e-027
gb|AJ502907.1|AJ502907 AJ502907 MTAMP Medicago truncatula c... 122 6e-027
gb|CX524879.1|CX524879 s13dNF13A11AT085_478392 Aphid-Infect... 122 6e-027
gb|CX532293.1|CX532293 s13dNF67G06MJ040_270882 Methyl Jasmo... 122 6e-027
gb|CX532300.1|CX532300 s13dNF67H03MJ028_270895 Methyl Jasmo... 122 6e-027
gb|CX533946.1|CX533946 s13dNF0NA09MJ065_321656 Methyl Jasmo... 122 6e-027
gb|CX541058.1|CX541058 s13dNF58D03GS030_465404 Germinating ... 122 6e-027
gb|BQ154271.1|BQ154271 NF063D03IR1F1030 Irradiated Medicago... 122 8e-027
gb|AC137703.41| Medicago truncatula clone mth2-11d24, compl... 94 2e-026
gb|AC144765.19| Medicago truncatula clone mth2-35o11, compl... 94 2e-026
gb|BI311382.1|BI311382 EST5313132 GESD Medicago truncatula ... 120 2e-026
gb|AL378151.1|AL378151 MtBB36D03R1 MtBB Medicago truncatula... 118 1e-025
gb|AL381871.1|AL381871 MtBC03E07F1 MtBC Medicago truncatula... 117 1e-025
gb|BE942447.1|BE942447 EST422026 MGHG Medicago truncatula c... 116 3e-025
gb|DW015828.1|DW015828 EST1224789 MTY Medicago truncatula c... 114 3e-025
gb|AL382854.1|AL382854 MtBC10D02F1 MtBC Medicago truncatula... 115 1e-024
gb|AL382855.1|AL382855 MtBC10D02R1 MtBC Medicago truncatula... 105 1e-021
>gb|BQ158962.1|BQ158962 NF096D02PL1F1016 Phosphate starved leaf Medicago truncatula cDNA
clone NF096D02PL 5', mRNA sequence
Length = 785
Score = 122 bits (260), Expect(2) = 9e-032
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +3
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 228 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 404
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 548 GQKSKMARERNLEKNKGA 495
GQK+KMARERNLEK K A
Sbjct: 189 GQKAKMARERNLEKQKQA 242
>gb|BQ138926.1|BQ138926 NF009B09PH1F1074 Phoma-infected Medicago truncatula cDNA clone
NF009B09PH 5', mRNA sequence
Length = 595
Score = 122 bits (260), Expect(2) = 9e-032
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +1
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 133 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 309
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 548 GQKSKMARERNLEKNKGA 495
GQK+KMARERNLEK K A
Sbjct: 94 GQKAKMARERNLEKQKQA 147
>gb|BF650599.1|BF650599 NF098H07EC1F1062 Elicited cell culture Medicago truncatula cDNA
clone NF098H07EC 5', mRNA sequence
Length = 560
Score = 122 bits (260), Expect(2) = 9e-032
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +1
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 115 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 291
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 548 GQKSKMARERNLEKNKGA 495
GQK+KMARERNLEK K A
Sbjct: 76 GQKAKMARERNLEKQKQA 129
>gb|BQ156987.1|BQ156987 NF099D11IR1F1094 Irradiated Medicago truncatula cDNA clone
NF099D11IR 5', mRNA sequence
Length = 549
Score = 122 bits (260), Expect(2) = 9e-032
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +3
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 117 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 293
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 548 GQKSKMARERNLEKNKGA 495
GQK+KMARERNLEK K A
Sbjct: 78 GQKAKMARERNLEKQKQA 131
>gb|BQ147288.1|BQ147288 NF038G08FL1F1068 Developing flower Medicago truncatula cDNA clone
NF038G08FL 5', mRNA sequence
Length = 538
Score = 122 bits (260), Expect(2) = 9e-032
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +2
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 113 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 289
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 548 GQKSKMARERNLEKNKGA 495
GQK+KMARERNLEK K A
Sbjct: 74 GQKAKMARERNLEKQKQA 127
>gb|BG455467.1|BG455467 NF059A09PL1F1067 Phosphate starved leaf Medicago truncatula cDNA
clone NF059A09PL 5', mRNA sequence
Length = 528
Score = 122 bits (260), Expect(2) = 9e-032
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +3
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 120 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 296
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 548 GQKSKMARERNLEKNKGA 495
GQK+KMARERNLEK K A
Sbjct: 81 GQKAKMARERNLEKQKQA 134
>gb|BF650684.1|BF650684 NF095H12EC1F1102 Elicited cell culture Medicago truncatula cDNA
clone NF095H12EC 5', mRNA sequence
Length = 521
Score = 122 bits (260), Expect(2) = 9e-032
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +2
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 113 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 289
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 548 GQKSKMARERNLEKNKGA 495
GQK+KMARERNLEK K A
Sbjct: 74 GQKAKMARERNLEKQKQA 127
>gb|BI269926.1|BI269926 NF016D03IR1F1029 Irradiated Medicago truncatula cDNA clone
NF016D03IR 5', mRNA sequence
Length = 413
Score = 125 bits (268), Expect = 7e-028
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = -2 / +2
Query: 533 MARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQ 354
+AR + +++ KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++
Sbjct: 86 LARGTSRSRSRXGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFT 265
Query: 353 CFPHLK 336
CFPHLK
Sbjct: 266 CFPHLK 283
>gb|AL377280.1|AL377280 MtBB30E04F1 MtBB Medicago truncatula cDNA clone MtBB30E04 T3, mRNA
sequence
Length = 336
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +2
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 38 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 217
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 218 RHPKSDLFTCFPHLK 262
>gb|AL378150.1|AL378150 MtBB36D03F1 MtBB Medicago truncatula cDNA clone MtBB36D03 T3, mRNA
sequence
Length = 481
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 55 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 234
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 235 RHPKSDLFTCFPHLK 279
>gb|AL386182.1|AL386182 MtBC33A08R1 MtBC Medicago truncatula cDNA clone MtBC33A08 T7, mRNA
sequence
Length = 526
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +2
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 56 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 235
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 236 RHPKSDLFTCFPHLK 280
>gb|AL389572.1|AL389572 MtBC55G10F1 MtBC Medicago truncatula cDNA clone MtBC55G10 T3, mRNA
sequence
Length = 499
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 61 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 240
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 241 RHPKSDLFTCFPHLK 285
>gb|BF635782.1|BF635782 NF039E11DT1F1084 Drought Medicago truncatula cDNA clone NF039E11DT
5', mRNA sequence
Length = 552
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 64 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 243
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 244 RHPKSDLFTCFPHLK 288
>gb|BI308544.1|BI308544 EST529954 GPOD Medicago truncatula cDNA clone pGPOD-7M19 5' end,
mRNA sequence
Length = 533
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 64 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 243
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 244 RHPKSDLFTCFPHLK 288
>gb|BI311023.1|BI311023 EST5312773 GESD Medicago truncatula cDNA clone pGESD9P15 5' end,
mRNA sequence
Length = 535
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +3
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 66 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 245
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 246 RHPKSDLFTCFPHLK 290
>gb|BI312231.1|BI312231 EST5313981 GESD Medicago truncatula cDNA clone pGESD17M22 5' end,
mRNA sequence
Length = 493
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +3
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 24 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 203
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 204 RHPKSDLFTCFPHLK 248
>gb|BQ135944.1|BQ135944 NF026A07EC1F1053 Elicited cell culture Medicago truncatula cDNA
clone NF026A07EC 5', mRNA sequence
Length = 875
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 178 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 357
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 358 RHPKSDLFTCFPHLK 402
>gb|AJ501900.1|AJ501900 AJ501900 MTAMP Medicago truncatula cDNA clone mtgmadc120013b05,
mRNA sequence
Length = 568
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +2
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 95 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 274
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 275 RHPKSDLFTCFPHLK 319
>gb|AJ502907.1|AJ502907 AJ502907 MTAMP Medicago truncatula cDNA clone mtgmadc120027b10,
mRNA sequence
Length = 349
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +3
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 84 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 263
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 264 RHPKSDLFTCFPHLK 308
>gb|CX524879.1|CX524879 s13dNF13A11AT085_478392 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 542
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 73 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 252
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 253 RHPKSDLFTCFPHLK 297
>gb|CX532293.1|CX532293 s13dNF67G06MJ040_270882 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 526
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +3
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 57 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 236
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 237 RHPKSDLFTCFPHLK 281
>gb|CX532300.1|CX532300 s13dNF67H03MJ028_270895 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 486
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 46 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 225
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 226 RHPKSDLFTCFPHLK 270
>gb|CX533946.1|CX533946 s13dNF0NA09MJ065_321656 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 510
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 73 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 252
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 253 RHPKSDLFTCFPHLK 297
>gb|CX541058.1|CX541058 s13dNF58D03GS030_465404 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 536
Score = 122 bits (261), Expect = 6e-027
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 67 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 246
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 247 RHPKSDLFTCFPHLK 291
>gb|BQ154271.1|BQ154271 NF063D03IR1F1030 Irradiated Medicago truncatula cDNA clone
NF063D03IR 5', mRNA sequence
Length = 524
Score = 122 bits (260), Expect = 8e-027
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = -2 / +2
Query: 512 EKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 116 KQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 292
>gb|AC137703.41| Medicago truncatula clone mth2-11d24, complete sequence
Length = 127446
Score = 93.6 bits (198), Expect(3) = 2e-026
Identities = 31/40 (77%), Positives = 39/40 (97%)
Frame = -2 / -2
Query: 455 IQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
+QCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 124352 LQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 124233
Score = 51.5 bits (106), Expect(3) = 2e-026
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -2 / -2
Query: 569 STMGGGNGQKSKMARERNLEKNKGA 495
S MGGGNGQK+KMARERNLEK K A
Sbjct: 125987 SAMGGGNGQKAKMARERNLEKQKQA 125913
Score = 30.9 bits (61), Expect(3) = 2e-026
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 491 GSQLETNKKAMSIQ 450
GSQLE NKKAMSIQ
Sbjct: 125755 GSQLEKNKKAMSIQ 125714
>gb|AC144765.19| Medicago truncatula clone mth2-35o11, complete sequence
Length = 130836
Score = 93.6 bits (198), Expect(3) = 2e-026
Identities = 31/40 (77%), Positives = 39/40 (97%)
Frame = -2 / +1
Query: 455 IQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
+QCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 77287 LQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 77406
Score = 51.5 bits (106), Expect(3) = 2e-026
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -2 / +1
Query: 569 STMGGGNGQKSKMARERNLEKNKGA 495
S MGGGNGQK+KMARERNLEK K A
Sbjct: 75652 SAMGGGNGQKAKMARERNLEKQKQA 75726
Score = 30.9 bits (61), Expect(3) = 2e-026
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / +2
Query: 491 GSQLETNKKAMSIQ 450
GSQLE NKKAMSIQ
Sbjct: 75884 GSQLEKNKKAMSIQ 75925
>gb|BI311382.1|BI311382 EST5313132 GESD Medicago truncatula cDNA clone pGESD10P17 5' end,
mRNA sequence
Length = 508
Score = 120 bits (257), Expect = 2e-026
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = -2 / +2
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA
Sbjct: 59 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEA 238
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPH K
Sbjct: 239 RHPKSDLFTCFPHFK 283
>gb|AL378151.1|AL378151 MtBB36D03R1 MtBB Medicago truncatula cDNA clone MtBB36D03 T7, mRNA
sequence
Length = 432
Score = 118 bits (252), Expect = 1e-025
Identities = 43/52 (82%), Positives = 50/52 (96%)
Frame = -2 / +2
Query: 491 GSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
GSQLE NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 2 GSQLEKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 157
>gb|AL381871.1|AL381871 MtBC03E07F1 MtBC Medicago truncatula cDNA clone MtBC03E07 T3, mRNA
sequence
Length = 412
Score = 117 bits (251), Expect = 1e-025
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = -2 / +2
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + ++ + KGSQLE NKKAMSIQCKVCMQTF+CTT++VKC+EHA A
Sbjct: 59 GGNGQKAKMARERNLEKQKQAGKGSQLEKNKKAMSIQCKVCMQTFICTTSKVKCKEHAXA 238
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 239 RHPKSDLFTCFPHLK 283
>gb|BE942447.1|BE942447 EST422026 MGHG Medicago truncatula cDNA clone pMGHG-8F13, mRNA
sequence
Length = 428
Score = 116 bits (249), Expect = 3e-025
Identities = 43/66 (65%), Positives = 57/66 (86%)
Frame = -2 / +1
Query: 533 MARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQ 354
+AR + +++ AK + L+ NKKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++
Sbjct: 79 LARGTSRSRSRLAKEASLKKNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFT 258
Query: 353 CFPHLK 336
CFPHLK
Sbjct: 259 CFPHLK 276
>gb|DW015828.1|DW015828 EST1224789 MTY Medicago truncatula cDNA clone MTYAA18, mRNA
sequence
Length = 529
Score = 114 bits (243), Expect(2) = 3e-025
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = -2 / +2
Query: 533 MARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQ 354
+AR + +++ AK + L+ KKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++
Sbjct: 119 LARGTSRSRSRLAKEASLKKTKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFT 298
Query: 353 CFPHLK 336
CFPHLK
Sbjct: 299 CFPHLK 316
Score = 22.1 bits (42), Expect(2) = 3e-025
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3 / +2
Query: 565 PWAVATARSPRWPASATWR 509
PW T + RW A T R
Sbjct: 83 PWVEVTVKRLRWLARGTSR 139
>gb|AL382854.1|AL382854 MtBC10D02F1 MtBC Medicago truncatula cDNA clone MtBC10D02 T3, mRNA
sequence
Length = 338
Score = 115 bits (245), Expect = 1e-024
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = -2 / +3
Query: 560 GGGNGQKSKMARERNLEKNKGAKGSQLETNKKAMSIQCKVCMQTFMCTTTEVKCREHAEA 381
GG + + + KGSQLE NKKA+SIQCKVCMQTF+CTT++VKC+EHA A
Sbjct: 39 GGNGQKAKMARERNLEKXKQAGKGSQLEKNKKAISIQCKVCMQTFICTTSKVKCKEHAXA 218
Query: 380 KHPKTDVYQCFPHLK 336
+HPK+D++ CFPHLK
Sbjct: 219 RHPKSDLFTCFPHLK 263
>gb|AL382855.1|AL382855 MtBC10D02R1 MtBC Medicago truncatula cDNA clone MtBC10D02 T7, mRNA
sequence
Length = 400
Score = 105 bits (223), Expect = 1e-021
Identities = 37/45 (82%), Positives = 44/45 (97%)
Frame = -2 / +1
Query: 470 KKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKTDVYQCFPHLK 336
KKAMSIQCKVCMQTF+CTT+EVKC+EHAEA+HPK+D++ CFPHLK
Sbjct: 1 KKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLK 135
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 731,464,509
Number of Sequences: 392609
Number of extensions: 10201962
Number of successful extensions: 56579
Number of sequences better than 1.0e-020: 42
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 22813863545
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)