TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCK30g08.yg.2.1
(164 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
***** No hits found ******
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.317 0.142 0.459
Matrix: BLOSUM62
Number of Hits to DB: 1,521,978
Number of Sequences: 7669
Number of extensions: 14708
Number of successful extensions: 2703
Number of sequences better than 1.0e-020: 0
length of database: 1,248,568
effective HSP length: 32
effective length of database: 1,003,160
effective search space used: 22069520
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)