TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCI2h07.yg.2.1
         (286 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO516105.1|CO516105  s13dSG65C1200098_445538 Glandular tr...   108   2e-025

>gb|CO516105.1|CO516105 s13dSG65C1200098_445538 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 529

 Score =  108 bits (231), Expect = 2e-025
 Identities = 43/72 (59%), Positives = 49/72 (68%)
 Frame = +3 / +1

                                                                       
Query: 9   QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
           QFW IGG SSH FA+FQGLLK +AGVDT+FTVTSK  DD EFSELY FKW          
Sbjct: 313 QFWVIGGASSHFFALFQGLLKVLAGVDTNFTVTSKAADDGEFSELYIFKWTSLLIPPMTL 492

                       
Query: 189 XXXNFIGVVAGI 224
              N +GV+ G+
Sbjct: 493 LIMNIVGVIVGV 528



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 2,133,125
Number of Sequences: 7669
Number of extensions: 21872
Number of successful extensions: 2309
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 39
effective length of database: 949,477
effective search space used: 52221235
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)