TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QBS5e09.xg.2.1
         (723 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO513961.1|CO513961  s13dSG71F0900075_156584 Glandular tr...    83   6e-034

>gb|CO513961.1|CO513961 s13dSG71F0900075_156584 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 574

 Score = 82.9 bits (175), Expect(3) = 6e-034
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = +1 / +3

                                                                       
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
           L   F+  +  RG ++ W PQ++VL HP+VGG  TH GWNST ESI  GVPML  P F D
Sbjct: 393 LSSEFVNEISDRGLIVSWCPQEQVLNHPSVGGFLTHCGWNSTTESICAGVPMLCWPFFTD 572




 Score = 71.5 bits (150), Expect(3) = 6e-034
 Identities = 25/52 (48%), Positives = 39/52 (75%)
 Frame = +1 / +3

                                                               
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
           +++  +D  C+EWL ++ PGSV+YV+FGS+  +T ++L+E AWGLAN   PF
Sbjct: 192 SNIWKEDTECLEWLGSKEPGSVVYVNFGSLTVMTEEKLLEFAWGLANCNKPF 347




 Score = 22.1 bits (42), Expect(3) = 6e-034
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1 / +3

                        
Query: 52 SSGAILNTFEDLES 93
          +S  ILNTF +LES
Sbjct: 42 NSTIILNTFNELES 83



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.317    0.136    0.413 


Matrix: BLOSUM62
Number of Hits to DB: 4,551,869
Number of Sequences: 7669
Number of extensions: 48320
Number of successful extensions: 769
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 185893661
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)