TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL10h01.xg.2.1
(610 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO512437.1|CO512437 s13dSG80H0600048_114388 Glandular tr... 104 9e-035
gb|CO512499.1|CO512499 s13dSG100G080005_114512 Glandular tr... 141 9e-035
gb|CO514428.1|CO514428 s13dSG36E0800065_327516 Glandular tr... 141 9e-035
gb|CO512718.1|CO512718 s13dSG19G0900068_121362 Glandular tr... 140 1e-034
gb|CO514048.1|CO514048 s13dSG72F1200095_156758 Glandular tr... 140 1e-034
gb|CO514565.1|CO514565 s13dSG42C0500038_327790 Glandular tr... 140 1e-034
gb|CO512029.1|CO512029 s13dSG18A0500033_108378 Glandular tr... 140 2e-034
gb|CO512498.1|CO512498 s13dSG100G070005_114510 Glandular tr... 140 2e-034
gb|CO513471.1|CO513471 s13dSG10F0400031_130106 Glandular tr... 140 2e-034
gb|CO515869.1|CO515869 s13dSG91A1000071_421277 Glandular tr... 140 2e-034
gb|CO513964.1|CO513964 s13dSG71F1200095_156590 Glandular tr... 101 4e-034
gb|CO514079.1|CO514079 s13dSG75A1100081_156820 Glandular tr... 138 4e-034
gb|CO514645.1|CO514645 s13dSG46C1100086_327950 Glandular tr... 138 4e-034
gb|CO516079.1|CO516079 s13dSG64H1100096_445486 Glandular tr... 137 2e-033
gb|CO515834.1|CO515834 s13dSG54F0300027_421207 Glandular tr... 136 2e-033
gb|CO514357.1|CO514357 s13dSG84E1000071_157376 Glandular tr... 136 3e-033
gb|CO516889.1|CO516889 s13dSG58B0300025_468324 Glandular tr... 128 5e-031
gb|CO514701.1|CO514701 s13dSG55A0900069_328062 Glandular tr... 112 4e-026
gb|CO516050.1|CO516050 s13dSG64D1100094_445428 Glandular tr... 95 3e-023
gb|CO516372.1|CO516372 s13dSG99H0800074_446072 Glandular tr... 95 8e-021
>gb|CO512437.1|CO512437 s13dSG80H0600048_114388 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 598
Score = 104 bits (221), Expect(2) = 9e-035
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = +1 / +2
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S GD DEID EF+GN SG P +++TN++A G G KE QF LWFDP+ D+HTY+I+
Sbjct: 353 YYLSSLGDAHDEIDFEFLGNLSGDPYIIHTNIYAQGKGNKEQQFYLWFDPTKDFHTYSIL 532
Query: 544 WNXTNIL 564
WN +I+
Sbjct: 533 WNPQSIV 553
Score = 57.0 bits (118), Expect(2) = 9e-035
Identities = 20/39 (51%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+ +GF SK +YL+G+ +++KL+ GNSAGTV+ +YLSS
Sbjct: 251 ASGSGFRSKNEYLFGKIDMQLKLVPGNSAGTVTTYYLSS 367
>gb|CO512499.1|CO512499 s13dSG100G080005_114512 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 590
Score = 141 bits (302), Expect = 9e-035
Identities = 52/98 (53%), Positives = 75/98 (76%)
Frame = +1 / +3
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 264 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 443
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TNV+A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 444 TNVYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 557
>gb|CO514428.1|CO514428 s13dSG36E0800065_327516 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 637
Score = 141 bits (302), Expect = 9e-035
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +1 / +1
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 253 GFGSKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQ 432
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 433 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 546
>gb|CO512718.1|CO512718 s13dSG19G0900068_121362 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 562
Score = 140 bits (301), Expect = 1e-034
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +1 / +1
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 247 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 426
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 427 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 540
>gb|CO514048.1|CO514048 s13dSG72F1200095_156758 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 573
Score = 140 bits (301), Expect = 1e-034
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +1 / +2
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 266 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 445
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 446 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 559
>gb|CO514565.1|CO514565 s13dSG42C0500038_327790 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 611
Score = 140 bits (301), Expect = 1e-034
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +1 / +1
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 244 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 423
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 424 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 537
>gb|CO512029.1|CO512029 s13dSG18A0500033_108378 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 591
Score = 140 bits (300), Expect = 2e-034
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +1 / +1
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 253 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQ 432
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 433 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 546
>gb|CO512498.1|CO512498 s13dSG100G070005_114510 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 579
Score = 140 bits (300), Expect = 2e-034
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +1 / +1
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 253 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQ 432
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 433 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 546
>gb|CO513471.1|CO513471 s13dSG10F0400031_130106 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 599
Score = 140 bits (300), Expect = 2e-034
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +1 / +2
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 218 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQ 397
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 398 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 511
>gb|CO515869.1|CO515869 s13dSG91A1000071_421277 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 536
Score = 140 bits (300), Expect = 2e-034
Identities = 51/97 (52%), Positives = 74/97 (76%)
Frame = +1 / +3
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 246 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 425
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNI 561
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 426 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 536
>gb|CO513964.1|CO513964 s13dSG71F1200095_156590 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 592
Score = 101 bits (216), Expect(2) = 4e-034
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = +1 / +1
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G DEID EF+GN SG+P L+TNV++ G G +E QF LWFDP+AD+HTY+I+
Sbjct: 358 YYLSSKGSNWDEIDFEFLGNVSGEPYTLHTNVFSQGKGNREQQFHLWFDPTADFHTYSIL 537
Query: 544 WNXTNIL 564
WN I+
Sbjct: 538 WNPQRIV 558
Score = 57.0 bits (118), Expect(2) = 4e-034
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+ +GF SK +YL+G +++KL+ GNSAGTV+ +YLSS
Sbjct: 256 ASGSGFQSKNEYLFGNIDMQLKLVPGNSAGTVTAYYLSS 372
>gb|CO514079.1|CO514079 s13dSG75A1100081_156820 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 538
Score = 138 bits (297), Expect = 4e-034
Identities = 50/93 (53%), Positives = 72/93 (77%)
Frame = +1 / +1
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 250 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQ 429
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 549
TN++A G G +E + +LWFDPSAD+HTY+I+WN
Sbjct: 430 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWN 528
>gb|CO514645.1|CO514645 s13dSG46C1100086_327950 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 572
Score = 138 bits (297), Expect = 4e-034
Identities = 51/98 (52%), Positives = 74/98 (75%)
Frame = +1 / +2
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 263 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 442
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD HTY+I+WN +I+
Sbjct: 443 TNIYAHGKGDREQRVNLWFDPSADXHTYSILWNHHHIV 556
>gb|CO516079.1|CO516079 s13dSG64H1100096_445486 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 576
Score = 137 bits (293), Expect = 2e-033
Identities = 50/98 (51%), Positives = 74/98 (75%)
Frame = +1 / +2
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
G SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 263 GSASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 442
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++A G G +E + +LWFDPSAD+HTY+I+WN +I+
Sbjct: 443 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIV 556
>gb|CO515834.1|CO515834 s13dSG54F0300027_421207 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 540
Score = 136 bits (292), Expect = 2e-033
Identities = 49/92 (53%), Positives = 71/92 (77%)
Frame = +1 / +3
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 264 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 443
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
TN++A G G +E + +LWFDPSAD+HTY+I+W
Sbjct: 444 TNIYAHGKGDREQRVNLWFDPSADFHTYSILW 539
>gb|CO514357.1|CO514357 s13dSG84E1000071_157376 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 534
Score = 136 bits (291), Expect = 3e-033
Identities = 49/93 (52%), Positives = 71/93 (76%)
Frame = +1 / +3
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGT + FY++S RDE+D EF+GN +GQP +
Sbjct: 246 GFASKVKYLFGRVSMKIKLVPGDSAGTGTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 425
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 549
TN++A G G +E + +LWFDPSAD+HTY+I+WN
Sbjct: 426 TNIYAHGKGDREQRVNLWFDPSADFHTYSILWN 524
>gb|CO516889.1|CO516889 s13dSG58B0300025_468324 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 514
Score = 128 bits (275), Expect = 5e-031
Identities = 47/89 (52%), Positives = 68/89 (76%)
Frame = +1 / +3
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 246 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 425
Query: 451 TNVWASGDGKKEHQFDLWFDPSADYHTYT 537
TN++A G G +E + +LWFDPSAD+HTY+
Sbjct: 426 TNIYAHGKGDREQRVNLWFDPSADFHTYS 512
>gb|CO514701.1|CO514701 s13dSG55A0900069_328062 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 515
Score = 112 bits (239), Expect = 4e-026
Identities = 42/84 (50%), Positives = 62/84 (73%)
Frame = +1 / +2
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ F+++S RDE+D EF+GN +GQP +
Sbjct: 263 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFHMNSDTDSVRDELDFEFLGNRTGQPYTVQ 442
Query: 451 TNVWASGDGKKEHQFDLWFDPSAD 522
TN++A G G +E + + WFDPSAD
Sbjct: 443 TNIYAHGKGDREQRVNHWFDPSAD 514
>gb|CO516050.1|CO516050 s13dSG64D1100094_445428 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 498
Score = 95.5 bits (202), Expect(2) = 3e-023
Identities = 36/72 (50%), Positives = 53/72 (73%)
Frame = +1 / +2
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 245 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRTGQPYTVQ 424
Query: 451 TNVWASGDGKKE 486
TN++A G G +E
Sbjct: 425 TNIYAHGKGDRE 460
Score = 26.7 bits (52), Expect(2) = 3e-023
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 496 DLWFDPSADY 525
+LWFDPSAD+
Sbjct: 469 NLWFDPSADF 498
>gb|CO516372.1|CO516372 s13dSG99H0800074_446072 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 464
Score = 95.0 bits (201), Expect = 8e-021
Identities = 36/72 (50%), Positives = 53/72 (73%)
Frame = +1 / +3
Query: 271 GFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
GF SK +YL+G S+++KL+ G+SAGTV+ FY++S RDE+D EF+GN +GQP +
Sbjct: 249 GFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQ 428
Query: 451 TNVWASGDGKKE 486
TN++A G G +E
Sbjct: 429 TNIYAHGKGDRE 464
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,698,473
Number of Sequences: 7669
Number of extensions: 41112
Number of successful extensions: 1126
Number of sequences better than 1.0e-020: 23
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 150396379
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)