TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QBB9c12.pg.2.1
         (545 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512186.1|CO512186  s13dSG03A0800053_113886 Glandular tr...   100   3e-022
gb|CO513961.1|CO513961  s13dSG71F0900075_156584 Glandular tr...    88   1e-021

>gb|CO512186.1|CO512186 s13dSG03A0800053_113886 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 602

 Score = 99.6 bits (211), Expect = 3e-022
 Identities = 34/68 (50%), Positives = 50/68 (73%)
 Frame = +2 / +1

                                                                       
Query: 107 ERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMES 286
           ERG +V WC Q+EVLAH +  CF THCGWNS++EA+  GVP+   P  ADQ T +K++  
Sbjct: 94  ERGKVVKWCLQVEVLAHPSVACFMTHCGWNSSMEAVSLGVPVVTFPSRADQLTNAKFLAD 273

                   
Query: 287 MWGLGVRV 310
           ++G+G+++
Sbjct: 274 VYGIGIKM 297



>gb|CO513961.1|CO513961 s13dSG71F0900075_156584 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 574

 Score = 88.1 bits (186), Expect(2) = 1e-021
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = +2 / +3

                                                                       
Query: 77  LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
           LS+E  ++  +RGLIVSWCPQ +VL H + G F THCGWNST E+I  GVPM   P + D
Sbjct: 393 LSSEFVNEISDRGLIVSWCPQEQVLNHPSVGGFLTHCGWNSTTESICAGVPMLCWPFFTD 572




 Score = 28.6 bits (56), Expect(2) = 1e-021
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2 / +3

                             
Query: 5   ELGNGLYNSGKPFIWVVR 58
           E   GL N  KPF+W++R
Sbjct: 309 EFAWGLANCNKPFLWIIR 362



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5,201,631
Number of Sequences: 7669
Number of extensions: 70870
Number of successful extensions: 2100
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 130779460
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)