TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAE20c02.yg.2.1
         (696 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO515781.1|CO515781  s13dSG77H0100016_419711 Glandular tr...    57   1e-027
>gb|CO515781.1|CO515781 s13dSG77H0100016_419711 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 550

 Score = 57.0 bits (118), Expect(3) = 1e-027
 Identities = 24/49 (48%), Positives = 32/49 (65%)
 Frame = -3 / +2

                                                            
Query: 574 PXXCTQCTAXXNSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGI 428
           P  C   +   NS+ EPY+VVH+ILL+H++AV  YR  Y+  Q G VGI
Sbjct: 272 PPFCIIESTKGNSTFEPYLVVHHILLAHSSAVRLYRRTYREEQNGFVGI 418

 Score = 51.0 bits (105), Expect(3) = 1e-027
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = -3 / +3

                                            
Query: 403 PFTNSTEDQKAAQRARDFHIGWFLDPLINGQYP 305
           P TN+ +D+ A QR  DF++GW ++PL++G YP
Sbjct: 444 PQTNTEKDRAACQRISDFYLGWIMEPLLHGDYP 542

 Score = 47.3 bits (97), Expect(3) = 1e-027
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3 / +2

                                                     
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
           +YA   F+    RVK W  + EP I A   YD+G+ PP  C+
Sbjct: 146 NYADVCFREFGDRVKYWTTVNEPNIFAVGSYDQGISPPRRCS 271
  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5,740,443
Number of Sequences: 7669
Number of extensions: 79270
Number of successful extensions: 918
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 175102830
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)