TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAD10d05.sg.3.3
         (1563 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512289.1|CO512289  s13dSG68C0200006_114092 Glandular tr...   283   4e-077

>gb|CO512289.1|CO512289 s13dSG68C0200006_114092 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 462

 Score =  283 bits (612), Expect = 4e-077
 Identities = 113/124 (91%), Positives = 117/124 (94%)
 Frame = +2 / +3

                                                                       
Query: 161 LLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDIN 340
           LLKDELDIVIPTIRNLDFL MWRPFF+ YHLIIVQDGDP+  IKVPEGFDYELYNRNDIN
Sbjct: 90  LLKDELDIVIPTIRNLDFLVMWRPFFEQYHLIIVQDGDPSNVIKVPEGFDYELYNRNDIN 269

                                                                       
Query: 341 RILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLS 520
           RILGPKASCIS KDSACRCFGYMVSKKKYIYTIDDDCFVAKDP+G +I ALEQHIKNLLS
Sbjct: 270 RILGPKASCISLKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEIKALEQHIKNLLS 449

               
Query: 521 PSTP 532
           PSTP
Sbjct: 450 PSTP 461




 Score =  122 bits (260), Expect(2) = 3e-043
 Identities = 53/61 (86%), Positives = 57/61 (93%)
 Frame = -1 / -3

                                                                       
Query: 531 GVDGLRRFLMCCSRALISLPDGSLATKQSSSMV*MYFFLETM*PKQRQAESLKEMQEALG 352
           GVDGLRRFLMCCS ALIS P GS ATKQSSSMV*+YFFLET+*PKQRQAESL+E+QEALG
Sbjct: 460 GVDGLRRFLMCCSSALISWPVGSFATKQSSSMV*IYFFLETI*PKQRQAESLREIQEALG 281

            
Query: 351 P 349
           P
Sbjct: 280 P 278




 Score = 68.9 bits (144), Expect(2) = 3e-043
 Identities = 34/50 (68%), Positives = 36/50 (72%)
 Frame = -1 / -3

                                                             
Query: 303 PSGTLMVLVGSPSCTMMRW*GWKKGRHISRKSRLRIVGITMXXXXXXSGV 154
           PSGTLM L GSPS TMMR    KKG HI+RKSRLR+VGITM      SGV
Sbjct: 232 PSGTLMTLEGSPS*TMMR*YCSKKGLHITRKSRLRMVGITMSSSSLRSGV 83



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 11,517,478
Number of Sequences: 7669
Number of extensions: 154065
Number of successful extensions: 895
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 44
effective length of database: 911,132
effective search space used: 433698832
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)