TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= L20621.2.1
         (1220 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512635.1|CO512635  s13dSG13F0500043_121196 Glandular tr...    50   2e-022

>gb|CO512635.1|CO512635 s13dSG13F0500043_121196 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 591

 Score = 49.6 bits (102), Expect(4) = 2e-022
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +3 / +2

                                                             
Query: 237 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARXXXXXXXXXXGEALASALG 386
           +RL+GKVAIVTG A GIG   V++F ++GA           G  LA+++G
Sbjct: 65  QRLEGKVAIVTGAASGIGAEAVKIFVENGAFVVIADINDELGHHLANSIG 214




 Score = 44.6 bits (91), Expect(4) = 2e-022
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = +3 / +2

                                               
Query: 534 SILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRR 641
           SIL FD  EFD  + VN  GAA  +KHAA  M  R+
Sbjct: 350 SILEFDLNEFDNTMAVNVRGAAATIKHAAHVMVERK 457




 Score = 34.5 bits (69), Expect(4) = 2e-022
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3 / +2

                                   
Query: 699 HAYTASKHAIVGLTKNAACELRAH 770
           H YTASKH ++GL ++   EL A+
Sbjct: 518 HDYTASKHGLIGLVRSTCSELGAY 589




 Score = 26.3 bits (51), Expect(4) = 2e-022
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3 / +2

                                      
Query: 390 QVSFVRCDVSVEDDVRRAVDWALSRHG 470
           +VS+  CDV  E  V   V + L R+G
Sbjct: 221 KVSYHHCDVRDEKQVEEIVAFTLERYG 301



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 6,630,636
Number of Sequences: 7669
Number of extensions: 71616
Number of successful extensions: 600
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 333524763
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)