TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 8010462.2.1
         (638 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|X58180.1|MSPAL  M.sativa PAL mRNA for phenylalanine ammo...    70   1e-022

>emb|X58180.1|MSPAL M.sativa PAL mRNA for phenylalanine ammonia-lyase
          Length = 2409

 Score = 70.3 bits (147), Expect(2) = 1e-022
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +1 / +1

                                                    
Query: 76   ESGXPLVPNRIRECRSYPLYRFVREEVGTEYLTGERTRSP 195
            ESG P +PN+I  CRSYPLY+FVREE+GT  LTGE   SP
Sbjct: 2047 ESGNPTIPNKINGCRSYPLYKFVREELGTGLLTGENVISP 2166




 Score = 50.1 bits (103), Expect(2) = 1e-022
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +1 / +1

                                
Query: 247  IDPLLECLKEWNGAPLPLC* 306
            IDPLLECL EWNGAPLP+C*
Sbjct: 2215 IDPLLECLGEWNGAPLPIC* 2274



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 4,791,449
Number of Sequences: 7669
Number of extensions: 61576
Number of successful extensions: 930
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 157499900
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)