TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3923331.2.1
         (496 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY082444.1|  Medicago sativa clone MS1-3FTa alpha 1,3 fuc...   150   9e-038
gb|AY082445.1|  Medicago sativa clone MS1-3FTb alpha 1,3 fuc...   150   9e-038

>gb|AY082444.1| Medicago sativa clone MS1-3FTa alpha 1,3 fucosyltransferase mRNA,
            complete cds
          Length = 2027

 Score =  150 bits (323), Expect = 9e-038
 Identities = 61/99 (61%), Positives = 76/99 (76%)
 Frame = -3 / +1

                                                                        
Query: 491  RERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIY 312
            RERG F+ ESIY+RS  LTL + ++AVL KF SLNHVPVWK ERP  ++GGD LK+Y+I 
Sbjct: 1426 RERGTFEMESIYLRSSNLTLESFKTAVLTKFTSLNHVPVWKPERPEILKGGDKLKVYKII 1605

                                                   
Query: 311  PVGLTQRQALYGFRFRDDSELEQYIKDHPCAKLEVIFV* 195
            P GLTQRQALY F+F  D +   +++ +PCAK EVIFV*
Sbjct: 1606 PAGLTQRQALYTFQFNGDVDFRSHLESNPCAKFEVIFV* 1722



>gb|AY082445.1| Medicago sativa clone MS1-3FTb alpha 1,3 fucosyltransferase mRNA,
            complete cds
          Length = 2134

 Score =  150 bits (323), Expect = 9e-038
 Identities = 61/99 (61%), Positives = 76/99 (76%)
 Frame = -3 / +1

                                                                        
Query: 491  RERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIY 312
            RERG F+ ESIY+RS  LTL + ++AVL KF SLNHVPVWK ERP  ++GGD LK+Y+I 
Sbjct: 1426 RERGTFEMESIYLRSSNLTLESFKTAVLTKFTSLNHVPVWKPERPQILKGGDKLKVYKII 1605

                                                   
Query: 311  PVGLTQRQALYGFRFRDDSELEQYIKDHPCAKLEVIFV* 195
            P GLTQRQALY F+F  D +   +++ +PCAK EVIFV*
Sbjct: 1606 PAGLTQRQALYTFQFNGDVDFRSHLESNPCAKFEVIFV* 1722



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 4,360,413
Number of Sequences: 7669
Number of extensions: 55513
Number of successful extensions: 1557
Number of sequences better than 1.0e-020: 3
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 114899097
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)