TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230358.2.1
(2136 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO517114.1|CO517114 s13dSG29F0300031_468774 Glandular tr... 231 2e-061
emb|AX776636.1| Sequence 5 from Patent WO02102841 122 2e-051
emb|AJ418368.1|MSA418368 Medicago sativa mRNA for nodulatio... 122 2e-051
emb|AJ418377.1|MSA418377 Medicago sativa mRNA for nodulatio... 116 5e-050
emb|AX776635.1| Sequence 4 from Patent WO02102841 116 5e-050
gb|AY563141.1| Medicago sativa calcium/calmodulin-regulated... 95 1e-046
gb|CO511940.1|CO511940 s13dSG05G1200100_103780 Glandular tr... 95 6e-039
gb|CO511959.1|CO511959 s13dSG07B0300029_103818 Glandular tr... 104 2e-035
gb|CO512543.1|CO512543 s13dSG08D0400030_121012 Glandular tr... 76 2e-033
gb|CO512977.1|CO512977 s13dSG09B0200013_121880 Glandular tr... 68 3e-030
gb|CO515446.1|CO515446 s13dSG50H0600060_417951 Glandular tr... 74 5e-028
>gb|CO517114.1|CO517114 s13dSG29F0300031_468774 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 496
Score = 231 bits (499), Expect = 2e-061
Identities = 95/128 (74%), Positives = 108/128 (84%)
Frame = -1 / +2
Query: 2049 ANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAQLSGVL 1870
AN+EGDALY+L++SL D +NVLQSWDPTLV+PCTWFHVTCN DN V RVDLGN+ LSG L
Sbjct: 110 ANSEGDALYTLKRSLTDPDNVLQSWDPTLVSPCTWFHVTCNQDNRVTRVDLGNSNLSGHL 289
Query: 1869 VPQLGQLKNLQYLELYSNNISGTIPPELGNLTNLVSLDLYMNNFSGNIPDSLGNLVKLRF 1690
VP+LG+L++LQYLELY NNI GTIP ELGNL +LVSLDLY NN SG IP SLG L L F
Sbjct: 290 VPELGKLEHLQYLELYKNNIQGTIPKELGNLKSLVSLDLYNNNISGTIPPSLGKLKNLVF 469
Query: 1689 LRLNNNSL 1666
LRLN+N L
Sbjct: 470 LRLNDNRL 493
Score = 134 bits (287), Expect = 4e-032
Identities = 64/109 (58%), Positives = 78/109 (71%)
Frame = +2 / -2
Query: 1724 GILPEKLFIYRSKLTRLVRFPSSGGIVPLMLLL*SSKYWRFFSWPSCGTRTPDNCAFPRS 1903
G++P+ L +Y+SKLTRL+RFPSS GIVP ML L +S+Y R S+PS GT+ PD PRS
Sbjct: 435 GMVPDMLLLYKSKLTRLLRFPSSLGIVP*MLFLYNSRY*RCSSFPSSGTKCPDRLELPRS 256
Query: 1904 TLITLLSLLHVTWNHVHGLTRVGSQLCKTLLASFKL*RRLYRASPSVLA 2050
T +T LS LHVT N V GLTRVGSQL +TL S +L + RASPS A
Sbjct: 255 TRVTRLSWLHVT*NQVQGLTRVGSQL*RTLSGSVRLRLSV*RASPSEFA 109
>emb|AX776636.1| Sequence 5 from Patent WO02102841
Length = 3339
Score = 122 bits (260), Expect(4) = 2e-051
Identities = 51/122 (41%), Positives = 75/122 (61%)
Frame = -1 / +3
Query: 1134 RLKEERTPGGELQFQTEVEMISMAVHKNLLRLRGFCMTPTERLLVYPYMANGSVASRLRE 955
+++ + G +F E+ ++S H+NL+ L G+C +++LVYP+M+NGS+ RL
Sbjct: 2115 KVRSSTSTQGTXEFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYG 2294
Query: 954 RQPSEPPLSWEPRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGL 775
L W R IALG+ARGL+YLH +IHRDVK++NILLD+ A V DFG
Sbjct: 2295 EASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGF 2474
Query: 774 AK 769
+K
Sbjct: 2475 SK 2480
Score = 64.8 bits (135), Expect(4) = 2e-051
Identities = 23/52 (44%), Positives = 39/52 (75%)
Frame = -1 / +3
Query: 753 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 598
D++V+ VRGT G++ PEY T + SEK+DVF +G++LLE+++G+ ++ R
Sbjct: 2499 DSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKR 2654
Score = 49.2 bits (101), Expect(4) = 2e-051
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1 / +3
Query: 573 LLDWVKGLLKEKKVEMLVDPDLQKAYEEVEVESLIQVALLCTQGSPLDRPKMSEVVRMLE 394
L++W K ++ KV+ +VDP ++ Y + +++VAL C + RP M ++VR LE
Sbjct: 2673 LVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 2852
Score = 35.0 bits (70), Expect(4) = 2e-051
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1 / +3
Query: 1833 LELYSNNISGTIPPELGNLTNLVSLDLYMNNFSGNIP 1723
L+L SNN+ G IP + +TNL L+L N F P
Sbjct: 1476 LDLSSNNLKGAIPYFVTKMTNLQILNLSHNQFDSLFP 1586
>emb|AJ418368.1|MSA418368 Medicago sativa mRNA for nodulation receptor kinase (nork gene), wild
type allele DMI2
Length = 3339
Score = 122 bits (260), Expect(4) = 2e-051
Identities = 51/122 (41%), Positives = 75/122 (61%)
Frame = -1 / +3
Query: 1134 RLKEERTPGGELQFQTEVEMISMAVHKNLLRLRGFCMTPTERLLVYPYMANGSVASRLRE 955
+++ + G +F E+ ++S H+NL+ L G+C +++LVYP+M+NGS+ RL
Sbjct: 2115 KVRSSTSTQGTXEFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYG 2294
Query: 954 RQPSEPPLSWEPRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGL 775
L W R IALG+ARGL+YLH +IHRDVK++NILLD+ A V DFG
Sbjct: 2295 EASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGF 2474
Query: 774 AK 769
+K
Sbjct: 2475 SK 2480
Score = 64.8 bits (135), Expect(4) = 2e-051
Identities = 23/52 (44%), Positives = 39/52 (75%)
Frame = -1 / +3
Query: 753 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 598
D++V+ VRGT G++ PEY T + SEK+DVF +G++LLE+++G+ ++ R
Sbjct: 2499 DSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKR 2654
Score = 49.2 bits (101), Expect(4) = 2e-051
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1 / +3
Query: 573 LLDWVKGLLKEKKVEMLVDPDLQKAYEEVEVESLIQVALLCTQGSPLDRPKMSEVVRMLE 394
L++W K ++ KV+ +VDP ++ Y + +++VAL C + RP M ++VR LE
Sbjct: 2673 LVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 2852
Score = 35.0 bits (70), Expect(4) = 2e-051
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1 / +3
Query: 1833 LELYSNNISGTIPPELGNLTNLVSLDLYMNNFSGNIP 1723
L+L SNN+ G IP + +TNL L+L N F P
Sbjct: 1476 LDLSSNNLKGAIPYFVTKMTNLQILNLSHNQFDSLFP 1586
>emb|AJ418377.1|MSA418377 Medicago sativa mRNA for nodulation receptor kinase (nork gene),
mutant allele nn1
Length = 3337
Score = 116 bits (249), Expect(4) = 5e-050
Identities = 49/122 (40%), Positives = 74/122 (60%)
Frame = -1 / +1
Query: 1134 RLKEERTPGGELQFQTEVEMISMAVHKNLLRLRGFCMTPTERLLVYPYMANGSVASRLRE 955
+++ + G +F E+ ++S H+NL+ L G+C +++LVYP+M+NGS+ RL
Sbjct: 2113 KVRSSTSTQGTKEFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYG 2292
Query: 954 RQPSEPPLSWEPRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGL 775
L W R IALG+ RGL+ LH P +IHRD+K++NILLD+ A V DFG
Sbjct: 2293 EASKRKILDWPTRLSIALGAPRGLA*LHTFPGPSVIHRDLKSSNILLDQSMCAKVADFGF 2472
Query: 774 AK 769
+K
Sbjct: 2473 SK 2478
Score = 64.8 bits (135), Expect(4) = 5e-050
Identities = 23/52 (44%), Positives = 39/52 (75%)
Frame = -1 / +1
Query: 753 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 598
D++V+ VRGT G++ PEY T + SEK+DVF +G++LLE+++G+ ++ R
Sbjct: 2497 DSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKR 2652
Score = 49.2 bits (101), Expect(4) = 5e-050
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1 / +1
Query: 573 LLDWVKGLLKEKKVEMLVDPDLQKAYEEVEVESLIQVALLCTQGSPLDRPKMSEVVRMLE 394
L++W K ++ KV+ +VDP ++ Y + +++VAL C + RP M ++VR LE
Sbjct: 2671 LVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 2850
Score = 35.0 bits (70), Expect(4) = 5e-050
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1 / +1
Query: 1833 LELYSNNISGTIPPELGNLTNLVSLDLYMNNFSGNIP 1723
L+L SNN+ G IP + +TNL L+L N F P
Sbjct: 1474 LDLSSNNLKGAIPYFVTKMTNLQILNLSHNQFDSLFP 1584
>emb|AX776635.1| Sequence 4 from Patent WO02102841
Length = 3378
Score = 116 bits (249), Expect(4) = 5e-050
Identities = 49/122 (40%), Positives = 74/122 (60%)
Frame = -1 / +1
Query: 1134 RLKEERTPGGELQFQTEVEMISMAVHKNLLRLRGFCMTPTERLLVYPYMANGSVASRLRE 955
+++ + G +F E+ ++S H+NL+ L G+C +++LVYP+M+NGS+ RL
Sbjct: 2134 KVRSSTSTQGTKEFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYG 2313
Query: 954 RQPSEPPLSWEPRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGL 775
L W R IALG+ RGL+ LH P +IHRD+K++NILLD+ A V DFG
Sbjct: 2314 EASKRKILDWPTRLSIALGAPRGLA*LHTFPGPSVIHRDLKSSNILLDQSMCAKVADFGF 2493
Query: 774 AK 769
+K
Sbjct: 2494 SK 2499
Score = 64.8 bits (135), Expect(4) = 5e-050
Identities = 23/52 (44%), Positives = 39/52 (75%)
Frame = -1 / +1
Query: 753 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLAR 598
D++V+ VRGT G++ PEY T + SEK+DVF +G++LLE+++G+ ++ R
Sbjct: 2518 DSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKR 2673
Score = 49.2 bits (101), Expect(4) = 5e-050
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1 / +1
Query: 573 LLDWVKGLLKEKKVEMLVDPDLQKAYEEVEVESLIQVALLCTQGSPLDRPKMSEVVRMLE 394
L++W K ++ KV+ +VDP ++ Y + +++VAL C + RP M ++VR LE
Sbjct: 2692 LVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 2871
Score = 35.0 bits (70), Expect(4) = 5e-050
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1 / +1
Query: 1833 LELYSNNISGTIPPELGNLTNLVSLDLYMNNFSGNIP 1723
L+L SNN+ G IP + +TNL L+L N F P
Sbjct: 1495 LDLSSNNLKGAIPYFVTKMTNLQILNLSHNQFDSLFP 1605
>gb|AY563141.1| Medicago sativa calcium/calmodulin-regulated receptor-like kinase
mRNA, complete cds
Length = 1798
Score = 95.0 bits (201), Expect(3) = 1e-046
Identities = 39/99 (39%), Positives = 61/99 (61%)
Frame = -1 / +1
Query: 1257 FSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVE 1078
F+ E+ +T FS+ N +G GGFG VY+G+L DG++VAVKR K+E +F+ E+
Sbjct: 526 FTFEEIYKSTAKFSSDNQIGEGGFGTVYRGKLNDGTIVAVKRAKKEALQSHLYEFKNEIY 705
Query: 1077 MISMAVHKNLLRLRGFCMTPTERLLVYPYMANGSVASRL 961
+S H NL+RL G+ E+L++ Y+ NG++ L
Sbjct: 706 TLSKIEHLNLVRLYGYLEHGDEKLIIVEYVGNGNLTEHL 822
Score = 63.4 bits (132), Expect(3) = 1e-046
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -1 / +1
Query: 918 RRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMD 760
R IA+ A ++YLH + D IIHRD+KA+NIL+ E+ A V DFG A+L +
Sbjct: 859 RLDIAIDIAHAITYLHMYTDNPIIHRDIKASNILISENLRAKVADFGFARLSE 1017
Score = 62.9 bits (131), Expect(3) = 1e-046
Identities = 21/44 (47%), Positives = 37/44 (84%)
Frame = -1 / +1
Query: 750 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 619
TH++T V+GT G++ PEYL T + +EK+DV+ +G++L+E++TG+
Sbjct: 1030 THISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGR 1161
>gb|CO511940.1|CO511940 s13dSG05G1200100_103780 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 595
Score = 95.0 bits (201), Expect(3) = 6e-039
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = -1 / +1
Query: 981 GSVASRLRERQPSEPPLSWEPRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDF 802
GS+ + L + P + PL W R +IA G+ARGL YLHD P +I+RD+K +NILL ED+
Sbjct: 4 GSLENHLHDLSPGQKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEDY 183
Query: 801 EAVVGDFGLAKL 766
+ + DFGLAK+
Sbjct: 184 HSKLSDFGLAKV 219
Score = 69.3 bits (145), Expect(3) = 6e-039
Identities = 27/59 (45%), Positives = 42/59 (71%)
Frame = -1 / +1
Query: 750 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM 574
THV+T V GT G+ AP+Y TG+ + K+D++ G+ LLELITG++A D R A + +++
Sbjct: 238 THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSIGVALLELITGRKAIDHRRPAKEQNLV 414
Score = 30.9 bits (61), Expect(3) = 6e-039
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -1 / +1
Query: 540 KKVEMLVDPDLQKAYEEVEVESLIQVALLCTQGSPLDRPKMSEVVRML 397
++ ++DP L+ Y + + +A +C Q P RP +++VV L
Sbjct: 445 RRFSEMIDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIADVVTAL 588
>gb|CO511959.1|CO511959 s13dSG07B0300029_103818 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 596
Score = 104 bits (222), Expect(3) = 2e-035
Identities = 42/89 (47%), Positives = 62/89 (69%)
Frame = -1 / +1
Query: 852 IIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 673
++HRDVK+ NILLDE F V DFGL++L THV+TA +GT G++ PEY + ++
Sbjct: 310 VMHRDVKSNNILLDEKFHVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTD 489
Query: 672 KTDVFGYGIMLLELITGQRAFDLARLAND 586
K+D + +G++L+ELI+ RA D+ R ND
Sbjct: 490 KSDAYSFGVVLVELISSLRAVDITRHRND 576
Score = 49.2 bits (101), Expect(3) = 2e-035
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -1 / +1
Query: 1014 ERLLVYPYMANGSVASRLRERQPSEPPLSWEPRRRIALGSARGLSYLH 871
E LLVY Y++NG+VA L + S L W R IAL +A L+YLH
Sbjct: 157 ELLLVYEYISNGTVADHLHGDRSSSCLLPWSVRLDIALETAEALAYLH 300
Score = 29.5 bits (58), Expect(3) = 2e-035
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1 / +1
Query: 1098 QFQTEVEMISMAVHKNLLRLRGFCMTPTERLLV 1000
QF EVE+++ HKNL+ L G + LL+
Sbjct: 70 QFMNEVEILARLRHKNLVTLYGCTSKHSRELLL 168
>gb|CO512543.1|CO512543 s13dSG08D0400030_121012 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 611
Score = 76.2 bits (160), Expect(3) = 2e-033
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 933 LSWEPRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 772
+SW R ++AL +ARG+ YLH + P IIHRD+K +NILLD + A V DFGL+
Sbjct: 283 MSWNGRIKVALDAARGIEYLHKYAQPPIIHRDIKTSNILLDSKWVAKVSDFGLS 444
Score = 50.6 bits (104), Expect(3) = 2e-033
Identities = 17/48 (35%), Positives = 33/48 (68%)
Frame = -1 / +1
Query: 756 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRA 613
+++H++ GT+G++ PEY + K+DV+ +G+ LLEL++G +A
Sbjct: 463 EESHLSLLAAGTVGYMDPEYYRLQYLTSKSDVYSFGVXLLELLSGYKA 606
Score = 50.1 bits (103), Expect(3) = 2e-033
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -1 / +1
Query: 1095 FQTEVEMISMAVHKNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPS 943
F E+E +S HKNL++L GF R+LVY YM NGS+ L + Q S
Sbjct: 124 FVNELESLSRLHHKNLVKLLGFYEDKNGRILVYEYMNNGSLNDHLHKFQTS 276
>gb|CO512977.1|CO512977 s13dSG09B0200013_121880 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 582
Score = 68.0 bits (142), Expect(3) = 3e-030
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -1 / +1
Query: 936 PLSWEPRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 766
PL+W R +I G+A+GL YLH+ K +H D+K +NILL D + DFGL +L
Sbjct: 172 PLTWSDRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHDMTPYISDFGLGRL 342
Score = 51.9 bits (107), Expect(3) = 3e-030
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = -1 / +1
Query: 1098 QFQTEVEMISMAVHKNLLRLRGFCMTPTERLLVYPYMANGSVASRL 961
+FQTEVE I H N+ LR + + E+LL+Y Y+ NGS+AS +
Sbjct: 4 EFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYIPNGSLASAI 141
Score = 46.0 bits (94), Expect(3) = 3e-030
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -1 / +1
Query: 717 GHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 619
G+ APE L K S+K DV+ YG++LLE+ITG+
Sbjct: 457 GYQAPEALKVVKPSQKWDVYSYGVILLEMITGR 555
>gb|CO515446.1|CO515446 s13dSG50H0600060_417951 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 531
Score = 73.9 bits (155), Expect(2) = 5e-028
Identities = 34/111 (30%), Positives = 60/111 (54%)
Frame = -1 / +3
Query: 726 GTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 547
G +G+IAPEY ST +S K DV+G+G++LLEL+TG + ++ + + L+DWV
Sbjct: 198 GELGYIAPEYSSTMVASLKGDVYGFGVLLLELVTGCKPLEVNNIDEEFKGNLVDWVNMHS 377
Query: 546 KEKKVEMLVDPDLQKAYEEVEVESLIQVALLCTQGSPLDRPKMSEVVRMLE 394
+++ +D + + E+ +++A C DR M +V L+
Sbjct: 378 SSGRLKDCIDRSISGKGNDEEILQFLKIASNCVIARAKDRWSMYQVYNSLK 530
Score = 66.6 bits (139), Expect(2) = 5e-028
Identities = 27/50 (54%), Positives = 39/50 (78%)
Frame = -1 / +3
Query: 912 RIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLM 763
RI LG+ARGL++LH C P II +++ + IL+DE+F+A + DFGLA+LM
Sbjct: 9 RIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARIMDFGLARLM 158
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 18,540,097
Number of Sequences: 7669
Number of extensions: 279572
Number of successful extensions: 1839
Number of sequences better than 1.0e-020: 14
length of database: 1,248,568
effective HSP length: 45
effective length of database: 903,463
effective search space used: 601706358
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)