TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3107376.2.2
(1851 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DQ222911.1| Medicago sativa ferulate 5-hydroxylase (F5H-... 80 1e-056
gb|AF195800.1|AF195800 Medicago sativa isoflavone synthase ... 85 1e-056
gb|DQ222912.1| Medicago sativa ferulate 5-hydroxylase (F5H-... 82 2e-056
gb|AF195802.1|AF195802 Medicago sativa isoflavone synthase ... 86 3e-056
gb|AF195801.1|AF195801 Medicago sativa isoflavone synthase ... 86 1e-055
gb|L11046.1|ALFEICA4HA Medicago sativa elicitor-inducible c... 147 6e-053
gb|CO512107.1|CO512107 s13dSG18H1200096_108534 Glandular tr... 73 8e-036
gb|CO516169.1|CO516169 s13dSG67C0300018_445666 Glandular tr... 139 2e-034
gb|CO513716.1|CO513716 s13dSG15C0700050_140214 Glandular tr... 100 6e-022
>gb|DQ222911.1| Medicago sativa ferulate 5-hydroxylase (F5H-K1) mRNA, complete cds
Length = 1904
Score = 80.3 bits (169), Expect(6) = 1e-056
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = -1 / +1
Query: 858 LQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGR 679
L LT DNIK I++++ ET +E+ M+ELM + L K+Q+E+ R
Sbjct: 976 LHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWVMAELMKSPEDLKKVQQELAEVVGLSR 1155
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLL 586
V E D ++ YLK +KE++R+HPP P LL
Sbjct: 1156 QVEEPDFEKLTYLKCALKETLRLHPPIPLLL 1248
Score = 72.5 bits (152), Expect(6) = 1e-056
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = -1 / +1
Query: 591 LLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQG 436
LL H + + +NGY IP RV++NAWA+ RD CWD+ E F P RFL+ G
Sbjct: 1240 LLLHETAEEATVNGYFIPKQARVMINAWAIGRDANCWDEPESFKPSRFLKPG 1395
Score = 60.2 bits (125), Expect(6) = 1e-056
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = -1 / +1
Query: 1509 HNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNCTDVAFAPYGE 1330
+ G+ +++G + + +S AA VL+ D++ ++RP + Y+ D+AFA YG
Sbjct: 313 YGGIFHLRMGFLHMVAISDADAARQVLQVQDNIFSNRPATVAIKYLTYDRADMAFAHYGP 492
Query: 1329 YWRTARKVVNTHLLSAK 1279
+WR RK+ L S K
Sbjct: 493 FWRQMRKLCVMKLFSRK 543
Score = 54.7 bits (113), Expect(6) = 1e-056
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = -1 / +1
Query: 420 DMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEME 274
D G + F+PFG+GRR C G + +++ +A+L++ F WE+P M+
Sbjct: 1402 DFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMK 1548
Score = 29.0 bits (57), Expect(6) = 1e-056
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1 / +1
Query: 264 AKVDMSDQFGMTLRRTQKLYLVP 196
+++DMSD FG+T R +L +P
Sbjct: 1552 SEMDMSDVFGLTAPRASRLIAIP 1620
Score = 27.6 bits (54), Expect(6) = 1e-056
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1 / +1
Query: 1605 PTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYG 1510
P P LPIIG++ ++ H +L KYG
Sbjct: 223 PPGPKGLPIIGNMLMMDQLTHRGLANLAKKYG 318
>gb|AF195800.1|AF195800 Medicago sativa isoflavone synthase 1 (ifs1) mRNA, partial cds
Length = 1501
Score = 84.9 bits (179), Expect(7) = 1e-056
Identities = 31/82 (37%), Positives = 56/82 (68%)
Frame = -1 / +3
Query: 840 LTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
+T + IKG++V++F A +++ + E++++EL+NN VL K ++EV + R+V E D
Sbjct: 825 ITKEQIKGLVVDLFSAGTDSTAVATEWALAELINNPRVLQKAREEVYSVVGKDRLVDEVD 1004
Query: 660 LSRMPYLKATIKESMRIHPPAP 595
+PY++A +KE+ R+HPP P
Sbjct: 1005 TQNLPYIRAIVKETFRMHPPLP 1070
Score = 78.0 bits (164), Expect(7) = 1e-056
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 573 THDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAE 424
T +CEINGY IP G V+ N W + RDP WD+ EF PERFLE G + E
Sbjct: 1089 TEECEINGYVIPEGALVLFNVWQVGRDPKYWDRPSEFRPERFLETGAEGE 1238
Score = 48.7 bits (100), Expect(7) = 1e-056
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = -1 / +3
Query: 441 QGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEM 289
+G +D+ G+ + +PFG+GRR+C G A + + +LA+LI FD ++
Sbjct: 1230 EGEAGPLDLRGQHFQLLPFGSGRRMCPGVNLATSGMATLLASLIQCFDLQV 1382
Score = 35.0 bits (70), Expect(7) = 1e-056
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1 / +3
Query: 1353 VAFAPYGEYWRTARKVVNTHLLSAKMV 1273
VA P+G YWR RK++ LL+A V
Sbjct: 315 VAMVPFGPYWRFVRKLIMNDLLNATTV 395
Score = 34.5 bits (69), Expect(7) = 1e-056
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1 / +3
Query: 1509 HNGLMLVQVGAVPTIVVSTPQAAEAVLRTHD 1417
H L + G++PT+V STP+ + L+TH+
Sbjct: 159 HGPLFSLSFGSMPTVVASTPELFKLFLQTHE 251
Score = 34.1 bits (68), Expect(7) = 1e-056
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 1608 PPTPPGKLPIIGHLHLI 1558
PP+P +LP IGHLHL+
Sbjct: 63 PPSPKPRLPFIGHLHLL 113
Score = 25.4 bits (49), Expect(7) = 1e-056
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 264 AKVDMSDQFGMTLRRTQKLYLVP 196
AKV M ++ G+T+ R L VP
Sbjct: 1419 AKVSMEERAGLTVPRAHSLVCVP 1487
>gb|DQ222912.1| Medicago sativa ferulate 5-hydroxylase (F5H-K10) mRNA, complete cds
Length = 1885
Score = 81.7 bits (172), Expect(6) = 2e-056
Identities = 35/91 (38%), Positives = 53/91 (58%)
Frame = -1 / +2
Query: 858 LQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGR 679
L LT DNIK I++++ ET +E++M+ELM + L K+Q+E+ R
Sbjct: 962 LHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKKVQQELAEVVGLSR 1141
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLL 586
V E D ++ YLK +KE++R+HPP P LL
Sbjct: 1142 QVEEPDFEKLTYLKCALKETLRLHPPIPLLL 1234
Score = 70.7 bits (148), Expect(6) = 2e-056
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -1 / +2
Query: 591 LLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQG 436
LL H + + +NGY IP RV++NAWA+ RD CW++ E F P RFL+ G
Sbjct: 1226 LLLHETAEEATVNGYFIPKQARVMINAWAIGRDANCWEEPESFKPSRFLKPG 1381
Score = 60.2 bits (125), Expect(6) = 2e-056
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = -1 / +2
Query: 1509 HNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNCTDVAFAPYGE 1330
+ G+ +++G + + +S AA VL+ D++ ++RP + Y+ D+AFA YG
Sbjct: 299 YGGIFHLRMGFLHMVAISDADAARQVLQVQDNIFSNRPATVAIKYLTYDRADMAFAHYGP 478
Query: 1329 YWRTARKVVNTHLLSAK 1279
+WR RK+ L S K
Sbjct: 479 FWRQMRKLCVMKLFSRK 529
Score = 54.7 bits (113), Expect(6) = 2e-056
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = -1 / +2
Query: 420 DMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEME 274
D G + F+PFG+GRR C G + +++ +A+L++ F WE+P M+
Sbjct: 1388 DFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMK 1534
Score = 29.0 bits (57), Expect(6) = 2e-056
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1 / +2
Query: 264 AKVDMSDQFGMTLRRTQKLYLVP 196
+++DMSD FG+T R +L +P
Sbjct: 1538 SEMDMSDVFGLTAPRASRLIAIP 1606
Score = 27.2 bits (53), Expect(6) = 2e-056
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1 / +2
Query: 1605 PTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYG 1510
P P LP+IG++ ++ H +L KYG
Sbjct: 209 PPGPKGLPVIGNMLMMDQLTHRGLANLAKKYG 304
>gb|AF195802.1|AF195802 Medicago sativa isoflavone synthase 3 (ifs3) mRNA, partial cds
Length = 1501
Score = 85.8 bits (181), Expect(7) = 3e-056
Identities = 32/82 (39%), Positives = 56/82 (68%)
Frame = -1 / +3
Query: 840 LTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
+T D+IKG++V+ F A +++ + E++++EL+NN VL K ++EV + R+V E D
Sbjct: 825 ITKDHIKGLVVDFFSAGTDSTAVATEWALAELINNPKVLEKAREEVYSVVGKDRLVDEVD 1004
Query: 660 LSRMPYLKATIKESMRIHPPAP 595
+PY++A +KE+ R+HPP P
Sbjct: 1005 TQNLPYIRAIVKETFRMHPPLP 1070
Score = 77.6 bits (163), Expect(7) = 3e-056
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / +3
Query: 573 THDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAE 424
T +CEINGY IP G ++ N W + RDP WD+ EF PERFLE G + E
Sbjct: 1089 TEECEINGYVIPEGALILFNVWQVGRDPKYWDRPSEFRPERFLETGAEGE 1238
Score = 48.3 bits (99), Expect(7) = 3e-056
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = -1 / +3
Query: 441 QGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEM 289
+G +D+ G+ + +PFG+GRR+C G A + + +LA+LI FD ++
Sbjct: 1230 EGEARPLDLRGQHFQLLPFGSGRRMCPGVNLATSGMATLLASLIQCFDLQV 1382
Score = 34.1 bits (68), Expect(7) = 3e-056
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 1359 TDVAFAPYGEYWRTARKVVNTHLLSAKMV 1273
+ VA P+G YW+ RK++ LL+A V
Sbjct: 309 SSVAMVPFGPYWKFVRKLIMNDLLNATTV 395
Score = 34.1 bits (68), Expect(7) = 3e-056
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1 / +3
Query: 1509 HNGLMLVQVGAVPTIVVSTPQAAEAVLRTHD 1417
H L + G++PT+V STP+ + L+TH+
Sbjct: 159 HGPLFSLYFGSMPTVVASTPELFKLFLQTHE 251
Score = 34.1 bits (68), Expect(7) = 3e-056
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 1608 PPTPPGKLPIIGHLHLI 1558
PP+P +LP IGHLHL+
Sbjct: 63 PPSPKPRLPFIGHLHLL 113
Score = 25.4 bits (49), Expect(7) = 3e-056
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 264 AKVDMSDQFGMTLRRTQKLYLVP 196
AKV M ++ G+T+ R L VP
Sbjct: 1419 AKVSMEERAGLTVPRAHSLVCVP 1487
>gb|AF195801.1|AF195801 Medicago sativa isoflavone synthase 2 (ifs2) mRNA, partial cds
Length = 1501
Score = 85.8 bits (181), Expect(7) = 1e-055
Identities = 32/82 (39%), Positives = 56/82 (68%)
Frame = -1 / +3
Query: 840 LTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
+T D+IKG++V+ F A +++ + E++++EL+NN VL K ++EV + R+V E D
Sbjct: 825 ITKDHIKGLVVDFFSAGTDSTAVATEWALAELINNPKVLEKAREEVYSVVGKDRLVDEVD 1004
Query: 660 LSRMPYLKATIKESMRIHPPAP 595
+PY++A +KE+ R+HPP P
Sbjct: 1005 TQNLPYIRAIVKETFRMHPPLP 1070
Score = 73.9 bits (155), Expect(7) = 1e-055
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = -1 / +3
Query: 573 THDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAE 424
T +CEINGY IP G ++ N W + RD WD+ EF PERFLE G + E
Sbjct: 1089 TEECEINGYVIPEGALILFNVWQVGRDSKYWDRPSEFRPERFLETGAEGE 1238
Score = 48.3 bits (99), Expect(7) = 1e-055
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = -1 / +3
Query: 441 QGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEM 289
+G +D+ G+ + +PFG+GRR+C G A + + +LA+LI FD ++
Sbjct: 1230 EGEARPLDLRGQHFQLLPFGSGRRMCPGVNLATSGMATLLASLIQCFDLQV 1382
Score = 35.9 bits (72), Expect(7) = 1e-055
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1 / +3
Query: 1359 TDVAFAPYGEYWRTARKVVNTHLLSAKMV 1273
+ VA AP+G YW+ RK++ LL+A V
Sbjct: 309 SSVAMAPFGPYWKFVRKLIMNDLLNATTV 395
Score = 34.1 bits (68), Expect(7) = 1e-055
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1 / +3
Query: 1509 HNGLMLVQVGAVPTIVVSTPQAAEAVLRTHD 1417
H L + G++PT+V STP+ + L+TH+
Sbjct: 159 HGPLFSLYFGSMPTVVASTPELFKLFLQTHE 251
Score = 34.1 bits (68), Expect(7) = 1e-055
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 1608 PPTPPGKLPIIGHLHLI 1558
PP+P +LP IGHLHL+
Sbjct: 63 PPSPKPRLPFIGHLHLL 113
Score = 25.4 bits (49), Expect(7) = 1e-055
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 264 AKVDMSDQFGMTLRRTQKLYLVP 196
AKV M ++ G+T+ R L VP
Sbjct: 1419 AKVSMEERAGLTVPRAHSLVCVP 1487
>gb|L11046.1|ALFEICA4HA Medicago sativa elicitor-inducible cinnamic acid 4-hydroxylase mRNA,
complete cds
Length = 1744
Score = 147 bits (316), Expect(3) = 6e-053
Identities = 60/150 (40%), Positives = 96/150 (64%)
Frame = -1 / +3
Query: 867 LLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATP 688
+L QK + DN+ I+ N+ AAIET+ +E+ ++EL+N++ + K+++E+
Sbjct: 876 ILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLG 1055
Query: 687 DGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAW 508
G V E DL ++PYL+A IKE++R+ P L+PH + HD ++NG+ IPA ++++VNAW
Sbjct: 1056 PGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAW 1235
Query: 507 ALARDPTCWDKAEEFFPERFLEQGRDAEVD 418
L +P W K EEF PERFLE+ E +
Sbjct: 1236 WLPNNPAHWKKPEEFRPERFLEEESHVEAN 1325
Score = 60.2 bits (125), Expect(3) = 6e-053
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = -1 / +3
Query: 1500 LMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNCTDVAFAPYGEYWR 1321
+ L+++G +VVS+P+ A+ VL T SR RN V DI D+ F YGE+WR
Sbjct: 231 IFLLRMGQRNLVVVSSPELAKEVLHTQCVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWR 410
Query: 1320 TARKVVNTHLLSAKMV 1273
R+++ + K+V
Sbjct: 411 KMRRIMTVPFFTNKVV 458
Score = 43.2 bits (88), Expect(3) = 6e-053
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1 / +3
Query: 432 DAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFD 298
++ V+ G D R++PFG GRR C G A+ + I + L+ + +
Sbjct: 1305 ESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVE 1439
>gb|CO512107.1|CO512107 s13dSG18H1200096_108534 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 495
Score = 72.5 bits (152), Expect(4) = 8e-036
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = -1 / +2
Query: 591 LLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQG 436
LL H + + +NGY IP RV++NAWA+ RD CWD+ E F P RFL+ G
Sbjct: 86 LLLHETAEEATVNGYFIPKQARVMINAWAIGRDANCWDEPESFKPSRFLKPG 241
Score = 56.5 bits (117), Expect(4) = 8e-036
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = -1 / +2
Query: 435 RDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEME 274
+ E D G + F+PFG+GRR C G + +++ +A+L++ F WE+P M+
Sbjct: 233 KPGEPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMK 394
Score = 43.7 bits (89), Expect(4) = 8e-036
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / +2
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLL 586
V E D ++ YLK +KE++R+HPP P LL
Sbjct: 5 VEEPDFEKLTYLKCALKETLRLHPPIPLLL 94
Score = 29.0 bits (57), Expect(4) = 8e-036
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1 / +2
Query: 264 AKVDMSDQFGMTLRRTQKLYLVP 196
+++DMSD FG+T R +L +P
Sbjct: 398 SEMDMSDVFGLTAPRASRLIAIP 466
>gb|CO516169.1|CO516169 s13dSG67C0300018_445666 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 506
Score = 139 bits (298), Expect(2) = 2e-034
Identities = 63/128 (49%), Positives = 80/128 (62%)
Frame = -1 / +2
Query: 813 LVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKA 634
L +MF E+S V+ ++MSE++ N V+ K Q EVR V E +L ++ YLK+
Sbjct: 83 LQDMFVGGTESSSEVVLWAMSEMVKNPMVMEKAQVEVRRVFDKKGYVDETELHQLIYLKS 262
Query: 633 TIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPE 454
IKE+MR+HP P L+P S C+INGY IPA TRVIVNAWA+ RDP W AE F PE
Sbjct: 263 VIKETMRLHPSLPLLIPRESIKPCQINGYDIPAKTRVIVNAWAIGRDPRYWVDAESFKPE 442
Query: 453 RFLEQGRD 430
RFL D
Sbjct: 443 RFLNSRFD 466
Score = 22.6 bits (43), Expect(2) = 2e-034
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -1 / +2
Query: 444 EQGRDAEVDMYGKDIRFVPFGA 379
E+ ++ D G D ++PFG+
Sbjct: 440 ERFLNSRFDFKGTDFEYIPFGS 505
>gb|CO513716.1|CO513716 s13dSG15C0700050_140214 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 300
Score = 100 bits (213), Expect = 6e-022
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = -1 / +2
Query: 543 IPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRIC 364
IP G+ ++VN WA+ARDP W F PERFL G + +VD+ G D +PFGAGRRIC
Sbjct: 5 IPKGSTLLVNVWAIARDPGKWADPLMFNPERFLPGGENCDVDVKGNDFEVIPFGAGRRIC 184
Query: 363 AGATFAIATVEIMLANLIYHFDWEM 289
AG I V++ +A L++ + E+
Sbjct: 185 AGLNLRIRMVQLQIATLVHSLNREL 259
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 10,768,638
Number of Sequences: 7669
Number of extensions: 129826
Number of successful extensions: 951
Number of sequences better than 1.0e-020: 9
length of database: 1,248,568
effective HSP length: 44
effective length of database: 911,132
effective search space used: 521167504
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)