TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2949674.2.1
         (658 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AJ410118.1|AJ410118  AJ410118 Medicago sativa library (Ka...   142   4e-035

>gb|AJ410118.1|AJ410118 AJ410118 Medicago sativa library (Kalo P) Medicago sativa cDNA
           clone U380, mRNA sequence
          Length = 672

 Score =  142 bits (305), Expect = 4e-035
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = +2 / +2

                                                                       
Query: 323 GTGSLQPHECGGRCAERCSATAYQKPCLFFCRKCCAACLCVPPGTYGNKNTCPCYNNWKT 502
           G GSL+ ++C  +C+ RC  T Y KPC+FFC+KCC  CLCVPPG YGNK  CPCYNNWKT
Sbjct: 149 GPGSLKSYQCPSQCSRRCGQTQYHKPCMFFCQKCCKKCLCVPPGYYGNKAVCPCYNNWKT 328

                    
Query: 503 KRGGPKCP* 529
           ++GGPKCP*
Sbjct: 329 QQGGPKCP* 355



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 4,421,618
Number of Sequences: 7669
Number of extensions: 53870
Number of successful extensions: 1101
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 163058720
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)