TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647391.2.1
(1118 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO515733.1|CO515733 s13dSG77B1200101_419615 Glandular tr... 115 5e-041
gb|CO512932.1|CO512932 s13dSG86E0600039_121790 Glandular tr... 117 6e-040
gb|CO512672.1|CO512672 s13dSG19C0200006_121270 Glandular tr... 115 3e-037
gb|CO512017.1|CO512017 s13dSG07H0100016_103934 Glandular tr... 111 2e-035
gb|CO512411.1|CO512411 s13dSG80F0100011_114336 Glandular tr... 110 4e-035
gb|CO512266.1|CO512266 s13dSG03H1100092_114046 Glandular tr... 109 1e-034
gb|CO516142.1|CO516142 s13dSG65H0600060_445612 Glandular tr... 116 8e-034
gb|CO516448.1|CO516448 s13dSG28A0500034_446224 Glandular tr... 111 4e-033
gb|CO512339.1|CO512339 s13dSG68G0900068_114192 Glandular tr... 108 2e-032
gb|CO516002.1|CO516002 s13dSG61G0700056_445332 Glandular tr... 104 3e-032
gb|CO513935.1|CO513935 s13dSG71D0500042_156532 Glandular tr... 111 4e-032
gb|CO513560.1|CO513560 s13dSG12H0800064_139902 Glandular tr... 94 7e-032
gb|CO511777.1|CO511777 s13dSG01H1100096_103454 Glandular tr... 108 2e-031
gb|CO512012.1|CO512012 s13dSG07G0600052_103924 Glandular tr... 105 1e-030
gb|CO515660.1|CO515660 s13dSG60C0900070_419469 Glandular tr... 108 2e-030
gb|AJ410143.1|AJ410143 AJ410143 Medicago sativa library (Ka... 88 1e-027
gb|AJ888486.1|AJ888486 AJ888486 Medicago sativa subsp. x va... 79 2e-026
gb|AJ888508.1|AJ888508 AJ888508 Medicago sativa subsp. x va... 77 1e-025
gb|CO514214.1|CO514214 s13dSG70G0900068_157090 Glandular tr... 95 7e-024
>gb|CO515733.1|CO515733 s13dSG77B1200101_419615 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 567
Score = 115 bits (245), Expect(3) = 5e-041
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = +2 / +2
Query: 101 NDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGR 280
+ L +LG W SPFV+RV+ L LKG+ Y+YVEED NKS +LL NPV++ VPVL+H G+
Sbjct: 44 DSLTLLGFWGSPFVLRVKWALELKGIQYQYVEEDFRNKSDMLLQYNPVYRKVPVLVHDGK 223
Query: 281 AINESQVILQYIDEVW 328
+I+ES VIL+Y+DE+W
Sbjct: 224 SISESLVILEYVDEIW 271
Score = 46.0 bits (94), Expect(3) = 5e-041
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
+LP DPYERA ARFW + DDK A++ F
Sbjct: 284 LLPHDPYERAKARFWAKFADDKCVPAFIATFF 379
Score = 40.0 bits (81), Expect(3) = 5e-041
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2 / +2
Query: 536 GRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLID 646
GR +FGG++IGF D +G + W + +G LID
Sbjct: 455 GRRYFGGENIGFADIAVGIFGFWARVIEETVGINLID 565
>gb|CO512932.1|CO512932 s13dSG86E0600039_121790 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 569
Score = 117 bits (251), Expect(3) = 6e-040
Identities = 48/78 (61%), Positives = 58/78 (74%)
Frame = +2 / +2
Query: 95 GDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHA 274
G D+K++G W SPFV RV L LKG+ YEYVEED+ NK+ LLL NPVHK VPVL+HA
Sbjct: 26 GSQDVKLVGFWVSPFVKRVEWALKLKGVDYEYVEEDIFNKTPLLLELNPVHKKVPVLVHA 205
Query: 275 GRAINESQVILQYIDEVW 328
+ I ES +IL+YIDE W
Sbjct: 206 QKPIAESFIILEYIDETW 259
Score = 42.3 bits (86), Expect(3) = 6e-040
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2 / +2
Query: 533 RGRPFFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRLIDPAR 655
+G+ FFGGD+IG++D LG W + ++IDP +
Sbjct: 440 KGKKFFGGDNIGYLDLALGWISYWLPVFEEVGSMQIIDPLK 562
Score = 37.3 bits (75), Expect(3) = 6e-040
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKVESA 424
+LP PYERA+ARFW + + K+ +A
Sbjct: 272 LLPQHPYERALARFWADFAEQKLLNA 349
>gb|CO512672.1|CO512672 s13dSG19C0200006_121270 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 565
Score = 115 bits (245), Expect(3) = 3e-037
Identities = 47/78 (60%), Positives = 57/78 (73%)
Frame = +2 / +2
Query: 95 GDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHA 274
G D+K++G W SPFV RV L LKG+ YEYVEED+ NK+ LLL NPVHK VPVL+HA
Sbjct: 80 GSQDVKLVGFWVSPFVKRVEWALKLKGVDYEYVEEDIFNKTPLLLELNPVHKKVPVLVHA 259
Query: 275 GRAINESQVILQYIDEVW 328
+ I E +IL+YIDE W
Sbjct: 260 QKPIAELFIILEYIDETW 313
Score = 37.3 bits (75), Expect(3) = 3e-037
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKVESA 424
+LP PYERA+ARFW + + K+ +A
Sbjct: 326 LLPQHPYERALARFWADFAEQKLLNA 403
Score = 35.9 bits (72), Expect(3) = 3e-037
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2 / +2
Query: 533 RGRPFFGGDDIGFVDAVLGGYLGW 604
+G+ FFGGD+IG++D LG W
Sbjct: 494 KGKKFFGGDNIGYLDLALGWISYW 565
>gb|CO512017.1|CO512017 s13dSG07H0100016_103934 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 111 bits (236), Expect(3) = 2e-035
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
+A N++ +L W SPF +RVRI L KG+ +EY EEDL NKS LLL NPVHK +PVL+
Sbjct: 62 LAMANEVILLDYWVSPFGMRVRIALAEKGIKHEYREEDLRNKSPLLLQMNPVHKKIPVLI 241
Query: 269 HAGRAINESQVILQYIDEVWAGTGP 343
H G+ I ES + +QYIDEVW P
Sbjct: 242 HNGKPICESLIAVQYIDEVWNEKSP 316
Score = 42.3 bits (86), Expect(3) = 2e-035
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY+R+ ARFW Y+D K+
Sbjct: 317 LLPSDPYQRSQARFWADYVDKKI 385
Score = 29.0 bits (57), Expect(3) = 2e-035
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 539 RPFFGGDDIGFVDAVL 586
+ +FGGD IGFVD L
Sbjct: 491 KTYFGGDKIGFVDVAL 538
>gb|CO512411.1|CO512411 s13dSG80F0100011_114336 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 578
Score = 110 bits (234), Expect(3) = 4e-035
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +2 / +1
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
+A +++ +L W SPF +R+RI L KG+ +EY EEDLSNKS LLL NPVHK +PVL+
Sbjct: 70 LAMADEVILLDSWASPFGMRLRIALAEKGIKHEYKEEDLSNKSPLLLQMNPVHKKIPVLI 249
Query: 269 HAGRAINESQVILQYIDEVWAGTGP 343
H G+ I ES V +QYIDEVW P
Sbjct: 250 HNGKPICESLVAVQYIDEVWNEKSP 324
Score = 41.8 bits (85), Expect(3) = 4e-035
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY+R+ ARFW Y+D K+
Sbjct: 325 LLPSDPYQRSRARFWADYVDKKI 393
Score = 33.1 bits (66), Expect(3) = 4e-035
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 539 RPFFGGDDIGFVDAVLGGYLGWF 607
+ +FGGD +GFVD L + WF
Sbjct: 499 KTYFGGDKLGFVDVALIPFYTWF 567
>gb|CO512266.1|CO512266 s13dSG03H1100092_114046 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 573
Score = 109 bits (233), Expect(3) = 1e-034
Identities = 47/85 (55%), Positives = 58/85 (68%)
Frame = +2 / +3
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
+A +++ +L W SPF IRVRI L KG+ +EY EEDL NKS LLL NPVHK +PVL+
Sbjct: 78 LAMADEVILLDYWVSPFGIRVRIALAEKGIKHEYREEDLRNKSPLLLQMNPVHKKIPVLI 257
Query: 269 HAGRAINESQVILQYIDEVWAGTGP 343
H G+ I ES + QYIDEVW P
Sbjct: 258 HNGKPICESLIAAQYIDEVWNDKSP 332
Score = 42.3 bits (86), Expect(3) = 1e-034
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY+R+ ARFW Y+D K+
Sbjct: 333 LLPSDPYQRSQARFWADYVDKKI 401
Score = 31.3 bits (62), Expect(3) = 1e-034
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +3
Query: 539 RPFFGGDDIGFVDAVLGGYLGW 604
+ +FGGD IGFVD L + W
Sbjct: 507 KTYFGGDKIGFVDVALIPFYTW 572
>gb|CO516142.1|CO516142 s13dSG65H0600060_445612 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 368
Score = 116 bits (247), Expect(2) = 8e-034
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = +2 / +1
Query: 101 NDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGR 280
+ L +LG W SPFV+RV+ L LKG+ Y+YVEED NKS +LL NPV+K VPVL+H G+
Sbjct: 46 DSLTLLGFWGSPFVLRVKWALELKGVQYQYVEEDFRNKSDMLLQYNPVYKKVPVLVHDGK 225
Query: 281 AINESQVILQYIDEVW 328
+I+ES VIL+Y+DE+W
Sbjct: 226 SISESLVILEYVDEIW 273
Score = 42.8 bits (87), Expect(2) = 8e-034
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 347 VLPADPYERAVARFWGAYIDDKVESAW 427
+LP DPYERA ARFW + DDK A+
Sbjct: 286 LLPHDPYERAKARFWAKFADDKCVPAF 366
>gb|CO516448.1|CO516448 s13dSG28A0500034_446224 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 514
Score = 111 bits (236), Expect(2) = 4e-033
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +2 / +2
Query: 104 DLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRA 283
D+K+LG+ SPF RV+I L KG+ YE+V+EDL+NKS LLL NPVHK +PV +H +
Sbjct: 92 DVKLLGIVGSPFFCRVQIALKFKGIEYEFVKEDLTNKSDLLLKYNPVHKKIPVFVHNEKP 271
Query: 284 INESQVILQYIDEVW 328
I+ES VIL+YIDEVW
Sbjct: 272 ISESLVILEYIDEVW 316
Score = 45.5 bits (93), Expect(2) = 4e-033
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY++++ARFW +IDDK+
Sbjct: 329 ILPSDPYQKSLARFWSKFIDDKI 397
>gb|CO512339.1|CO512339 s13dSG68G0900068_114192 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 515
Score = 108 bits (231), Expect(2) = 2e-032
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = +2 / +2
Query: 104 DLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRA 283
D+K+LG+ SPF RV+ L KG+ YE+V+EDL+NKS LLL NPVHK +PV +H +
Sbjct: 92 DVKLLGIVGSPFFCRVQTALKFKGIEYEFVKEDLTNKSDLLLKYNPVHKKIPVFVHNEKP 271
Query: 284 INESQVILQYIDEVW 328
I+ES VIL+YIDEVW
Sbjct: 272 ISESLVILEYIDEVW 316
Score = 45.5 bits (93), Expect(2) = 2e-032
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY++++ARFW +IDDK+
Sbjct: 329 ILPSDPYQKSLARFWSKFIDDKI 397
>gb|CO516002.1|CO516002 s13dSG61G0700056_445332 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 482
Score = 104 bits (222), Expect(2) = 3e-032
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = +2 / +3
Query: 107 LKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAI 286
+K+LG SPFV RV+I L LKG+ YE+ EE+L+ KS LL NPVHK VPV +H + I
Sbjct: 78 VKLLGATGSPFVCRVQIALKLKGIEYEFAEENLATKSEQLLKYNPVHKKVPVFVHNEKPI 257
Query: 287 NESQVILQYIDEVW 328
+ES VIL+YIDEVW
Sbjct: 258 SESLVILEYIDEVW 299
Score = 49.2 bits (101), Expect(2) = 3e-032
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +2 / +3
Query: 347 VLPADPYERAVARFWGAYIDDKVESAWLGMLF 442
+LP+DP++RA+ARFW +IDDK+ SA +F
Sbjct: 312 ILPSDPHQRALARFWSKFIDDKIVSASFKSVF 407
>gb|CO513935.1|CO513935 s13dSG71D0500042_156532 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 415
Score = 111 bits (236), Expect(2) = 4e-032
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +2 / +2
Query: 89 MAGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLL 268
+A N++ +L W SPF +RVRI L KG+ +EY EEDL NKS LLL NPVHK +PVL+
Sbjct: 65 LAMANEVILLDYWVSPFGMRVRIALAEKGIKHEYREEDLRNKSPLLLQMNPVHKKIPVLI 244
Query: 269 HAGRAINESQVILQYIDEVWAGTGP 343
H G+ I ES + +QYIDEVW P
Sbjct: 245 HNGKPICESLIAVQYIDEVWNEKSP 319
Score = 42.3 bits (86), Expect(2) = 4e-032
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY+R+ ARFW Y+D K+
Sbjct: 320 LLPSDPYQRSQARFWADYVDKKI 388
>gb|CO513560.1|CO513560 s13dSG12H0800064_139902 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 585
Score = 93.6 bits (198), Expect(3) = 7e-032
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +3
Query: 92 AGDNDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLH 271
+ ++K+ G+ SPF RV I L LKG+ Y+Y EE N S ++ NPV+K VPVL+H
Sbjct: 51 SNQEEVKLFGLVGSPFSTRVEIALKLKGVEYKYEEEKQGNLSDTVIKYNPVYKKVPVLVH 230
Query: 272 AGRAINESQVILQYIDEVW 328
G+ I+ES VIL+YIDE W
Sbjct: 231 NGKPISESLVILEYIDETW 287
Score = 46.4 bits (95), Expect(3) = 7e-032
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 347 VLPADPYERAVARFWGAYIDDK 412
+LP+DPY+RA+ARFW +IDDK
Sbjct: 300 ILPSDPYKRALARFWSKFIDDK 365
Score = 34.1 bits (68), Expect(3) = 7e-032
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2 / +3
Query: 545 FFGGDDIGFVDAVLGGYLGWFGAVGRIIGSRL 640
FFGGD+IG +D WF V + G +L
Sbjct: 480 FFGGDEIGLIDITAVFIAXWFPIVQEVTGLKL 575
>gb|CO511777.1|CO511777 s13dSG01H1100096_103454 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 574
Score = 108 bits (230), Expect(2) = 2e-031
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = +2 / +2
Query: 104 DLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRA 283
++++LGV SPFV RV+I L LKG+ Y Y+EE+L NKS LLL NP+HK VPV +H G+
Sbjct: 110 EVQLLGVGGSPFVRRVQIALKLKGIEYTYIEENLRNKSDLLLKYNPIHKKVPVFVHNGKP 289
Query: 284 INESQVILQYIDEVW 328
+ ES VIL+YIDE W
Sbjct: 290 LAESLVILEYIDETW 334
Score = 42.8 bits (87), Expect(2) = 2e-031
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+ P PYE+A+ARFW +IDDK+
Sbjct: 347 IFPQQPYEKALARFWSRFIDDKI 415
>gb|CO512012.1|CO512012 s13dSG07G0600052_103924 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 506
Score = 105 bits (225), Expect(2) = 1e-030
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = +2 / +2
Query: 113 VLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINE 292
+L W SPF +RVRI L KG+ +EY EEDL NKS LLL +PVHK +PVL+H G+ I E
Sbjct: 104 LLDYWVSPFGMRVRIALAEKGIKHEYREEDLRNKSPLLLQMDPVHKKIPVLIHNGKPICE 283
Query: 293 SQVILQYIDEVWAGTGP 343
S + +QYIDEVW P
Sbjct: 284 SLIAVQYIDEVWNDKSP 334
Score = 42.3 bits (86), Expect(2) = 1e-030
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY+R+ ARFW Y+D K+
Sbjct: 335 LLPSDPYQRSQARFWADYVDKKI 403
>gb|CO515660.1|CO515660 s13dSG60C0900070_419469 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 532
Score = 108 bits (230), Expect(2) = 2e-030
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = +2 / +1
Query: 104 DLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRA 283
++++LGV SPFV RV+I L LKG+ Y Y+EE+L NKS LLL NP+HK VPV +H G+
Sbjct: 109 EVQLLGVGGSPFVRRVQIALKLKGIEYTYIEENLRNKSDLLLKYNPIHKKVPVFVHNGKP 288
Query: 284 INESQVILQYIDEVW 328
+ ES VIL+YIDE W
Sbjct: 289 LAESLVILEYIDETW 333
Score = 39.6 bits (80), Expect(2) = 2e-030
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+ P PY +A+ARFW +IDDK+
Sbjct: 346 IFPQQPYGKALARFWSRFIDDKI 414
>gb|AJ410143.1|AJ410143 AJ410143 Medicago sativa library (Kalo P) Medicago sativa cDNA
clone U62, mRNA sequence
Length = 822
Score = 88.1 bits (186), Expect(3) = 1e-027
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = +2 / +1
Query: 131 SPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQ 310
SPF RV I L LKG+ Y+Y EE N S ++ NPV+K VPVL+H G+ I+ES VIL+
Sbjct: 10 SPFSTRVEIALKLKGVEYKYEEEKQGNLSDTVIKYNPVYKKVPVLVHNGKPISESLVILE 189
Query: 311 YIDEVW 328
YIDE W
Sbjct: 190 YIDETW 207
Score = 46.4 bits (95), Expect(3) = 1e-027
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2 / +1
Query: 347 VLPADPYERAVARFWGAYIDDK 412
+LP+DPY+RA+ARFW +IDDK
Sbjct: 220 ILPSDPYKRALARFWSKFIDDK 285
Score = 26.3 bits (51), Expect(3) = 1e-027
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 545 FFGGDDIGFVD 577
FFGGD+IG +D
Sbjct: 400 FFGGDEIGLID 432
>gb|AJ888486.1|AJ888486 AJ888486 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 777
Score = 79.4 bits (167), Expect(3) = 2e-026
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +2 / +1
Query: 194 EEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQYIDEVWAGTGP 343
EEDLSNKS LLL NPVHK +PVL+H G+ I ES + +QYIDEVW P
Sbjct: 7 EEDLSNKSPLLLXMNPVHKKIPVLIHNGKPICESLIAVQYIDEVWNDKSP 156
Score = 42.3 bits (86), Expect(3) = 2e-026
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY+R+ ARFW Y+D K+
Sbjct: 157 LLPSDPYQRSQARFWADYVDKKI 225
Score = 35.0 bits (70), Expect(3) = 2e-026
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 539 RPFFGGDDIGFVDAVLGGYLGWF 607
R +FGGD +GFVD L + WF
Sbjct: 331 RTYFGGDXLGFVDVTLIPFFTWF 399
>gb|AJ888508.1|AJ888508 AJ888508 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 739
Score = 77.1 bits (162), Expect(3) = 1e-025
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +2 / +1
Query: 194 EEDLSNKSALLLGSNPVHKSVPVLLHAGRAINESQVILQYIDEVWAGTGP 343
+EDLSNKS LLL NPVHK +PVL+H G+ I ES + +QYIDEVW P
Sbjct: 7 KEDLSNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIDEVWNDKSP 156
Score = 42.3 bits (86), Expect(3) = 1e-025
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 347 VLPADPYERAVARFWGAYIDDKV 415
+LP+DPY+R+ ARFW Y+D K+
Sbjct: 157 LLPSDPYQRSQARFWADYVDKKI 225
Score = 34.1 bits (68), Expect(3) = 1e-025
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 539 RPFFGGDDIGFVDAVLGGYLGWF 607
R +FGGD +GFVD L + WF
Sbjct: 331 RTYFGGDKLGFVDVXLIPFYTWF 399
>gb|CO514214.1|CO514214 s13dSG70G0900068_157090 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 344
Score = 94.5 bits (200), Expect(2) = 7e-024
Identities = 42/76 (55%), Positives = 51/76 (67%)
Frame = +2 / +3
Query: 101 NDLKVLGVWTSPFVIRVRIVLNLKGLAYEYVEEDLSNKSALLLGSNPVHKSVPVLLHAGR 280
N++ +L F +RVRI L K YEY EEDL NKS LLL NP+HK +PVL+H G+
Sbjct: 57 NEVVLLDGGAXMFGMRVRIALXEKSGKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGK 236
Query: 281 AINESQVILQYIDEVW 328
I ES +I QYIDEVW
Sbjct: 237 PIWESAIIGQYIDEVW 284
Score = 30.9 bits (61), Expect(2) = 7e-024
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 350 LPADPYERAVARFW 391
+P+ PYERA ARFW
Sbjct: 303 MPSHPYERAQARFW 344
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 6,538,125
Number of Sequences: 7669
Number of extensions: 72607
Number of successful extensions: 908
Number of sequences better than 1.0e-020: 24
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 302285529
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)