TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2521459.2.1
         (892 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO513318.1|CO513318  s13dSG37F0400031_129800 Glandular tr...   172   4e-044

>gb|CO513318.1|CO513318 s13dSG37F0400031_129800 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 564

 Score =  172 bits (371), Expect = 4e-044
 Identities = 67/133 (50%), Positives = 94/133 (70%)
 Frame = +2 / +1

                                                                       
Query: 260 TLDSIRQVLIRLEDSIIFGLLERAQFCYNADTYDSNAFHMDGFGGSLVEYIVRETEKLHA 439
           TLD++R+ L+R ED+I+FGL+ERA+F +N+ TYD N   + GF GSLVE++   TE + A
Sbjct: 160 TLDTVRETLVRQEDTIVFGLIERAKFPFNSQTYDQNYLQIPGFYGSLVEFVFSNTETVQA 339

                                                                       
Query: 440 QVGRYKSPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRLVKE 619
           + GRYK+P+E+PFF ++LP   +P   + + LHP A SINI+K +WKMYF +LLP  V  
Sbjct: 340 KAGRYKNPEENPFFPENLPLSLVPSYPFSKFLHPGAASINIDKSLWKMYFHDLLPLFVAS 519

                        
Query: 620 GSDGNAGSSALCD 658
           G DGN   +A  D
Sbjct: 520 GDDGNYAQTAASD 558




 Score = 96.4 bits (204), Expect = 5e-021
 Identities = 57/125 (45%), Positives = 68/125 (54%)
 Frame = -2 / -2

                                                                       
Query: 633 LPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGLL 454
           LPS P  TN G  S KYIF   L +LIE+A GCK       G   +G+   KKG SSG L
Sbjct: 533 LPSSPEATNNGSRS*KYIFHKDLSMLIEAAPGCKNFEKG*DGTSDNGKFSGKKGFSSGFL 354

                                                                       
Query: 453 YLPTCAWSFSVSLTIYSTKDPPKPSMWKALLSYVSAL*QNCALSKRPNMMLSSSLIKTCL 274
           YLP  A + SV L   ST +P KP + +   S V  L  N ALS RP  ++SS L K  L
Sbjct: 353 YLPALA*TVSVLLKTNSTNEP*KPGI*R*F*S*V*ELKGNFALSIRPKTIVSSCLTKVSL 174

                
Query: 273 MLSNV 259
            +S V
Sbjct: 173 TVSRV 159



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 8,072,114
Number of Sequences: 7669
Number of extensions: 123473
Number of successful extensions: 1233
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 232456653
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)