TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2493499.2.1
         (785 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO513961.1|CO513961  s13dSG71F0900075_156584 Glandular tr...    82   6e-029
gb|CO516956.1|CO516956  s13dSG81A0400021_468458 Glandular tr...    71   3e-023

>gb|CO513961.1|CO513961 s13dSG71F0900075_156584 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 574

 Score = 81.7 bits (172), Expect(2) = 6e-029
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -1 / +3

                                                               
Query: 545 VRHRGKIVAWAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCFAE 390
           +  RG IV+W PQ +VL HP+VGGF THCGW S  E+I  GVPML  P F +
Sbjct: 417 ISDRGLIVSWCPQEQVLNHPSVGGFLTHCGWNSTTESICAGVPMLCWPFFTD 572




 Score = 60.2 bits (125), Expect(2) = 6e-029
 Identities = 24/57 (42%), Positives = 32/57 (56%)
 Frame = -1 / +3

                                                                    
Query: 770 DPTCLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLRRGSVRG 600
           D  CL WL ++ P SV+YV+ GS+  +      E AW LA    PFLW++R   V G
Sbjct: 210 DTECLEWLGSKEPGSVVYVNFGSLTVMTEEKLLEFAWGLANCNKPFLWIIRPDLVTG 380



>gb|CO516956.1|CO516956 s13dSG81A0400021_468458 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 368

 Score = 70.7 bits (148), Expect(2) = 3e-023
 Identities = 24/41 (58%), Positives = 31/41 (75%)
 Frame = -1 / +1

                                                    
Query: 518 WAPQREVLAHPAVGGFWTHCGWKSMVEAISEGVPMLVQPCF 396
           WAPQ  VL H ++GGF THCGW S++EA+ EGVPM+  P +
Sbjct: 244 WAPQGAVLKHDSIGGFVTHCGWNSVLEAVCEGVPMVAWPLY 366




 Score = 51.9 bits (107), Expect(2) = 3e-023
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = -1 / +1

                                                           
Query: 761 CLAWLDARPPRSVLYVSMGSVARVDRAVFEETAWALAGSGVPFLWVLR 618
           CL+WL+++P +SV+ +S GS+ R  +A   E A  L  S   FLWV+R
Sbjct: 7   CLSWLESQPSQSVVLLSFGSMGRFSKAQINEIARGLEKSEQRFLWVVR 150



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5,633,357
Number of Sequences: 7669
Number of extensions: 69131
Number of successful extensions: 940
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 202896930
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)