TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2486118.2.1
         (635 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DQ122795.1|  Medicago sativa clone M22 putative cellulose...   145   5e-036

>gb|DQ122795.1| Medicago sativa clone M22 putative cellulose synthase catalytic
           subunit mRNA, partial cds
          Length = 512

 Score =  145 bits (311), Expect = 5e-036
 Identities = 54/75 (72%), Positives = 65/75 (86%)
 Frame = +2 / +2

                                                                       
Query: 8   DDVDDEFXDLYIVKWTSLMIPPIVIMMVNLIGIAVGFSRTIYSEIPQWSKLLGGVFFSFW 187
           +D +DEF DLY+VKW+ LM+PPI IMMVN I IAVG +RT+YS  PQWS+L+GG+FFSFW
Sbjct: 287 EDGEDEFADLYLVKWSFLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGLFFSFW 466

                          
Query: 188 VLAHLYPFAKGLMGR 232
           VL HLYPFAKGL+GR
Sbjct: 467 VLCHLYPFAKGLLGR 511



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5,162,665
Number of Sequences: 7669
Number of extensions: 68316
Number of successful extensions: 1088
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 156573430
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)