TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2485885.2.1
         (1063 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO516956.1|CO516956  s13dSG81A0400021_468458 Glandular tr...    95   1e-035
gb|CO513961.1|CO513961  s13dSG71F0900075_156584 Glandular tr...    69   4e-022
>gb|CO516956.1|CO516956 s13dSG81A0400021_468458 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 368

 Score = 94.5 bits (200), Expect(2) = 1e-035
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = +1 / +1

                                                                       
Query: 292 NLAELLPADFLARTKDRGLVWPTKAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMVP 471
           +L  LLP  F  RTK++G+V    APQ  +L H ++GGFVTHCGWNSVLE++  GVPMV 
Sbjct: 175 SLDGLLPEGFRERTKEKGMVVRNWAPQGAVLKHDSIGGFVTHCGWNSVLEAVCEGVPMVA 354

              
Query: 472 WPL 480
           WPL
Sbjct: 355 WPL 363

 Score = 74.8 bits (157), Expect(2) = 1e-022
 Identities = 32/67 (47%), Positives = 41/67 (61%)
 Frame = -3 / -1

                                                                       
Query: 485 APSGHGTIGTPCQRLSRTEFQPQCVTKPPTAAWASISFCGALVGHTSPLSFVLAKKSAGS 306
           A +GH TIGTP    S TEF PQCVT PP  +  S + CGA    T P SFVL++  +G+
Sbjct: 368 AYNGHATIGTPSHTASNTEFHPQCVTNPPIESCFSTAPCGAQFLTTMPFSFVLSRNPSGN 189

                  
Query: 305 SSARFPS 285
           + +R  S
Sbjct: 188 NPSRLSS 168

 Score = 70.3 bits (147), Expect(2) = 1e-035
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +1 / +1

                                                           
Query: 109 CVRWLDSQPPSSVVFLCFGSGGCFTAPQAHEIAHGLDRSGHRFLWVLR 252
           C+ WL+SQP  SVV L FGS G F+  Q +EIA GL++S  RFLWV+R
Sbjct: 7   CLSWLESQPSQSVVLLSFGSMGRFSKAQINEIARGLEKSEQRFLWVVR 150

 Score = 46.4 bits (95), Expect(2) = 1e-022
 Identities = 23/47 (48%), Positives = 26/47 (55%)
 Frame = -3 / -1

                                                          
Query: 248 STHRNRCPLRSRPCAISCAWGAVKQPPLPKHRNTTELGGCESSQRTH 108
           +TH+N C L S P AIS        P LPK  NTT   GC+SSQ  H
Sbjct: 146 TTHKNLCSLFSNPRAISLI*ALENLPMLPKLSNTTL*LGCDSSQLRH 6
>gb|CO513961.1|CO513961 s13dSG71F0900075_156584 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 574

 Score = 68.9 bits (144), Expect(2) = 4e-022
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = +1 / +3

                                                
Query: 367 PQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMVPWP 477
           PQ+++L H +VGGF+THCGWNS  ES+  GVPM+ WP
Sbjct: 450 PQEQVLNHPSVGGFLTHCGWNSTTESICAGVPMLCWP 560

 Score = 50.6 bits (104), Expect(2) = 4e-022
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +1 / +3

                                                            
Query: 106 ECVRWLDSQPPSSVVFLCFGSGGCFTAPQAHEIAHGLDRSGHRFLWVLR 252
           EC+ WL S+ P SVV++ FGS    T  +  E A GL      FLW++R
Sbjct: 216 ECLEWLGSKEPGSVVYVNFGSLTVMTEEKLLEFAWGLANCNKPFLWIIR 362
  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 9,544,248
Number of Sequences: 7669
Number of extensions: 146283
Number of successful extensions: 1582
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 284828310
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)