TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2441114.2.2
         (962 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512234.1|CO512234  s13dSG03E1200087_113982 Glandular tr...   358   e-100

>gb|CO512234.1|CO512234 s13dSG03E1200087_113982 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 588

 Score =  358 bits (777), Expect = e-100
 Identities = 144/183 (78%), Positives = 161/183 (87%)
 Frame = -1 / +1

                                                                       
Query: 863 RNSDSEPSPMAVKVYVVYYSMYGHVGKLAEEIQKGASSVEGVEAKTWQVPETLPEEVLGK 684
           R    + S MAVK+Y+VYYSMYGHV KLAEEI+KGA+SVEGVEAK WQVPETL EEVLGK
Sbjct: 40  RERPLKTSSMAVKLYIVYYSMYGHVEKLAEEIKKGAASVEGVEAKLWQVPETLQEEVLGK 219

                                                                       
Query: 683 MGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAG 504
           M APPK DVP+ITP EL+E DG +FGFPTRFGMMAAQ KAF DATGGLW+ QSLAGKPAG
Sbjct: 220 MSAPPKSDVPLITPNELSEGDGFVFGFPTRFGMMAAQFKAFLDATGGLWKAQSLAGKPAG 399

                                                                       
Query: 503 VFFCTGSQGGGQETTALTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAA 324
           +F+ TGSQGGGQETTALTAITQL HHGM+FVP+GYTFGA +F M+QV+GGSPYGAGT+A 
Sbjct: 400 IFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEQVKGGSPYGAGTYAG 579

              
Query: 323 DGS 315
           DGS
Sbjct: 580 DGS 588




 Score =  248 bits (536), Expect = 8e-067
 Identities = 119/176 (67%), Positives = 130/176 (73%)
 Frame = +1 / -2

                                                                       
Query: 316 EPSAANVPAP*GLPP*TWSMPNSLAPKV*PTGTNTMPWCVNWVIAVNAVVSWPPPWDPVQ 495
           EPS A VPAP GLPP T S+ N  AP V*P GTN +P   + VIAV+AVVS PPP +PV 
Sbjct: 587 EPSPAYVPAPYGLPPFTCSISNMPAPNV*PIGTNIIP**TS*VIAVSAVVSCPPP*EPVL 408

                                                                       
Query: 496 KKTPAGLPARLCSLQSPPVASKNAFICAAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 675
            K PAGLPA  C+   PPVAS+ A   AAIIPNLVG PK  PS S SS GVM+GTS LGG
Sbjct: 407 *KIPAGLPASDCAFHKPPVASRKALN*AAIIPNLVGKPKTKPSPSESSFGVMSGTSLLGG 228

                                                                   
Query: 676 APIFPSTSSGRVSGTCHVLASTPSTDEAPFWISSASLPTCPYME*YTT*TLTAIGE 843
           A I PSTSS  VSGTCH LASTPST+ APF+ISSAS  TCPYME*YT *+LTAI E
Sbjct: 227 ALILPSTSSCSVSGTCHSLASTPSTEAAPFFISSASFSTCPYME*YTM*SLTAIDE 60




 Score =  133 bits (285), Expect = 3e-032
 Identities = 58/134 (43%), Positives = 80/134 (59%)
 Frame = +3 / -1

                                                                       
Query: 435 QLGDRCQRCRLLATTLGSSAEEDAGRLAGKALLPPEPTSGIEERLHLRCHHSEPRWEPEE 614
           QL +  +RC LL+  L + A ED+GRLA K L  P+ TS I +   L  HHS+  WE ++
Sbjct: 468 QLSNSSKRCSLLSAALRTGAVEDSGRLACK*LCFPQTTSSI*KSFELSSHHSKSCWEAKD 289

                                                                       
Query: 615 DSVGLCEFLRRDDWHVRLRGCAHLSKHFLREGFRDLPCFSFNTFNRRGTFLDLFS*FANM 794
            ++ L EF+  D+W++ L  C H +KH L +  R LP F  N  +R  T L  F *F +M
Sbjct: 288 KTITLREFIWCDEWYITLGWCTHFTKHLLLQCLRYLP*FGLNALHRSSTLLYFFC*FLHM 109

                         
Query: 795 SIHGIVHDVDLNRH 836
           SIHG+VHDV  + H
Sbjct: 108 SIHGVVHDVKFDSH 67



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 8,182,022
Number of Sequences: 7669
Number of extensions: 109414
Number of successful extensions: 1225
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 254507877
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)