TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2441114.2.1
         (964 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512234.1|CO512234  s13dSG03E1200087_113982 Glandular tr...   330   2e-091

>gb|CO512234.1|CO512234 s13dSG03E1200087_113982 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 588

 Score =  330 bits (715), Expect = 2e-091
 Identities = 133/181 (73%), Positives = 150/181 (82%)
 Frame = +1 / +1

                                                                       
Query: 100 RSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMG 279
           R  +TS MAVK+Y+VYYSMYGHV KLA+EIKKGA SVEGVEAK+WQVPE L EEVLGKM 
Sbjct: 46  RPLKTSSMAVKLYIVYYSMYGHVEKLAEEIKKGAASVEGVEAKLWQVPETLQEEVLGKMS 225

                                                                       
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
           APPK DVP+ITP EL+E DG +FGFPTRFGMMAAQ KAF DATGGLW+ QSLAGKPAG+F
Sbjct: 226 APPKSDVPLITPNELSEGDGFVFGFPTRFGMMAAQFKAFLDATGGLWKAQSLAGKPAGIF 405

                                                                       
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADG 639
           +S            LTAITQL HHGM+FVP+GYTFGA +F M+QV+GGSPYGAGT+A DG
Sbjct: 406 YSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEQVKGGSPYGAGTYAGDG 585

            
Query: 640 S 642
           S
Sbjct: 586 S 588




 Score =  177 bits (382), Expect(2) = 3e-056
 Identities = 82/115 (71%), Positives = 88/115 (76%)
 Frame = -3 / -2

                                                                       
Query: 455 MPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGGAP 276
           +PAGLPA  C+   PPVAS+ A  *AAIIPNLVG PK  PS S SS GVM+GTS LGGA 
Sbjct: 401 IPAGLPASDCAFHKPPVASRKALN*AAIIPNLVGKPKTKPSPSESSFGVMSGTSLLGGAL 222

                                                                  
Query: 275 IFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEV 111
           I PSTSS  +SGTCH LASTPST+ APF ISSAS  TCPYME*YT * LTAI EV
Sbjct: 221 ILPSTSSCSVSGTCHSLASTPSTEAAPFFISSASFSTCPYME*YTM*SLTAIDEV 57




 Score =  123 bits (263), Expect = 4e-029
 Identities = 57/160 (35%), Positives = 84/160 (52%)
 Frame = -2 / -1

                                                                       
Query: 600 TLDLVHAEQLXXXXXXXXXXXXXXVRQLGNRRQRCSLLATTLGSSAEEHAGRLASEALLP 421
           T  L+H +                + QL N  +RCSLL+  L + A E +GRLA + L  
Sbjct: 546 TFHLLHLKHAGSECITDWNKYHSMMNQLSNSSKRCSLLSAALRTGAVEDSGRLACK*LCF 367

                                                                       
Query: 420 PEPTGGIEERLHLSCHHSEPCRKPKEDTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFR 241
           P+ T  I +   LS HHS+ C + K+ T++L +F+ CD+W++ L    H +KH   +  R
Sbjct: 366 PQTTSSI*KSFELSSHHSKSCWEAKDKTITLREFIWCDEWYITLGWCTHFTKHLLLQCLR 187

                                                   
Query: 240 DLPYLSLNTFNR*GTFLDLVS*FANMPIHGIVHNVDLNRH 121
            LP   LN  +R  T L    *F +M IHG+VH+V  + H
Sbjct: 186 YLP*FGLNALHRSSTLLYFFC*FLHMSIHGVVHDVKFDSH 67




 Score = 57.4 bits (119), Expect(3) = 2e-021
 Identities = 24/55 (43%), Positives = 34/55 (61%)
 Frame = +3 / +3

                                                                  
Query: 303 SHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQH 467
           +HHT  T  G* + LW+ +K+ NDG S +   RC+ W +E      QACR++LQH
Sbjct: 249 THHTK*TL*G*WFCLWLPNKIWNDGCSIQSFSRCYWWFVESTITCRQACRNLLQH 413




 Score = 56.1 bits (116), Expect(2) = 3e-056
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -3 / -2

                                                        
Query: 641 DPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
           +PS A VPAP GLPP+T S+ N  AP V*P GTN +P   S VIA
Sbjct: 587 EPSPAYVPAPYGLPPFTCSISNMPAPNV*PIGTNIIP**TS*VIA 453




 Score = 48.3 bits (99), Expect(3) = 2e-021
 Identities = 24/53 (45%), Positives = 29/53 (54%)
 Frame = +3 / +3

                                                                
Query: 111 DLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAW 269
           D  NG   L  VL HVW C +TS R++E C  C   *G  MAG *++    AW
Sbjct: 57  DFINGCQTLHRVLLHVWTCGETSRRNKEGCCFCGGR*GQTMAGT*DTARGGAW 215




 Score = 28.6 bits (56), Expect(3) = 2e-021
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3 / +3

                                                    
Query: 489 RDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
           RDY+A   Y A +  + +C+  L++R + V  G    W+ +
Sbjct: 435 RDYSAYCYYSAGSSWNDICSNRLYIRSRHV*DGASERWKSI 557



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 8,979,875
Number of Sequences: 7669
Number of extensions: 130875
Number of successful extensions: 1652
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 254507877
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)