TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440958.2.1
(791 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF000976.1|MSAF000976 Medicago sativa 7-O-methyltransfer... 174 1e-044
gb|U97125.1|MSU97125 Medicago sativa isoflavone-O-methytran... 173 2e-044
gb|AF000975.1|MSAF000975 Medicago sativa 7-O-methyltransfer... 173 2e-044
emb|AX050436.1| Sequence 1 from Patent WO0071736 173 2e-044
gb|AF023481.1|AF023481 Medicago sativa o-methytransferase (... 83 9e-036
gb|M63853.1|ALFSALMCAT Medicago sativa S-adenosyl-L-methion... 122 5e-029
emb|AX259373.1| Sequence 3 from Patent WO0173090 122 5e-029
gb|L10211.1|ALFIOM Medicago sativa isoliquiritigenin 2'-O-m... 112 6e-026
gb|CO512262.1|CO512262 s13dSG03H0600048_114038 Glandular tr... 101 9e-023
>gb|AF000976.1|MSAF000976 Medicago sativa 7-O-methyltransferase (7-IOMT(9)) mRNA, complete cds
Length = 1227
Score = 174 bits (374), Expect = 1e-044
Identities = 73/169 (43%), Positives = 102/169 (60%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
VF G+ S+VDVGGG G + I + FP L+C V D P VV + YV GDMF S+
Sbjct: 576 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSI 755
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQ 395
+ADAV LK I+H+W D DC++ILK CK+A+ G + + I + + + + +
Sbjct: 756 PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQVTQIK 935
Query: 396 CLFDLYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L D+ + +NG ER+E EWKK+ EAGF YKI P+ G S+IE+ P*
Sbjct: 936 LLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP* 1082
>gb|U97125.1|MSU97125 Medicago sativa isoflavone-O-methytransferase mRNA, complete cds
Length = 1231
Score = 173 bits (373), Expect = 2e-044
Identities = 73/169 (43%), Positives = 102/169 (60%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
VF G+ S+VDVGGG G + I + FP L+C V D P VV + YV GDMF S+
Sbjct: 577 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSI 756
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQ 395
+ADAV LK I+H+W D DC++ILK CK+A+ G + + I + + + + +
Sbjct: 757 PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIK 936
Query: 396 CLFDLYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L D+ + +NG ER+E EWKK+ EAGF YKI P+ G S+IE+ P*
Sbjct: 937 LLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP* 1083
>gb|AF000975.1|MSAF000975 Medicago sativa 7-O-methyltransferase (7-IOMT(6)) mRNA, complete cds
Length = 1284
Score = 173 bits (373), Expect = 2e-044
Identities = 73/169 (43%), Positives = 102/169 (60%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
VF G+ S+VDVGGG G + I + FP L+C V D P VV + YV GDMF S+
Sbjct: 582 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSI 761
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQ 395
+ADAV LK I+H+W D DC++ILK CK+A+ G + + I + + + + +
Sbjct: 762 PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIK 941
Query: 396 CLFDLYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L D+ + +NG ER+E EWKK+ EAGF YKI P+ G S+IE+ P*
Sbjct: 942 LLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP* 1088
>emb|AX050436.1| Sequence 1 from Patent WO0071736
Length = 1231
Score = 173 bits (373), Expect = 2e-044
Identities = 73/169 (43%), Positives = 102/169 (60%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
VF G+ S+VDVGGG G + I + FP L+C V D P VV + YV GDMF S+
Sbjct: 577 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSI 756
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQ 395
+ADAV LK I+H+W D DC++ILK CK+A+ G + + I + + + + +
Sbjct: 757 PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIK 936
Query: 396 CLFDLYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L D+ + +NG ER+E EWKK+ EAGF YKI P+ G S+IE+ P*
Sbjct: 937 LLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP* 1083
>gb|AF023481.1|AF023481 Medicago sativa o-methytransferase (iomt2003) mRNA, complete cds
Length = 1194
Score = 82.6 bits (174), Expect(2) = 9e-036
Identities = 35/91 (38%), Positives = 54/91 (59%)
Frame = +3 / +1
Query: 270 DCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDER 449
DC++ILK CK+A+ G + + I + + + + + L D+ + +NG ER+E
Sbjct: 787 DCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDVNMACLNGKERNEE 966
Query: 450 EWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
EWKK+ EAGF YKI P+ G S+IE+ P*
Sbjct: 967 EWKKLFIEAGFQHYKISPLTGFLSLIEIYP* 1059
Score = 82.2 bits (173), Expect(2) = 9e-036
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
VF G+ S+VDVGGG G + I + FP L+C V D P VV + YV GDMF S+
Sbjct: 580 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSI 759
Query: 216 SSADAVFLKSII 251
+ADAV LK +
Sbjct: 760 PNADAVLLKDCL 795
>gb|M63853.1|ALFSALMCAT Medicago sativa S-adenosyl-L-methionine: caffeic acid
3-0-methyltransferase mRNA, complete cds
Length = 1317
Score = 122 bits (261), Expect = 5e-029
Identities = 53/118 (44%), Positives = 71/118 (60%)
Frame = +3 / +1
Query: 33 TVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFES 212
T F+G+ SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF S
Sbjct: 616 TGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVS 795
Query: 213 VSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
+ ADAVF+K I HDW D C+K LKNC +A+P G ++ I+ A SS K V
Sbjct: 796 IPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGV 969
>emb|AX259373.1| Sequence 3 from Patent WO0173090
Length = 1098
Score = 122 bits (261), Expect = 5e-029
Identities = 53/118 (44%), Positives = 71/118 (60%)
Frame = +3 / +1
Query: 33 TVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFES 212
T F+G+ SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF S
Sbjct: 586 TGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVS 765
Query: 213 VSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
+ ADAVF+K I HDW D C+K LKNC +A+P G ++ I+ A SS K V
Sbjct: 766 IPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGV 939
>gb|L10211.1|ALFIOM Medicago sativa isoliquiritigenin 2'-O-methyltransferase mRNA,
complete cds
Length = 1300
Score = 112 bits (239), Expect = 6e-026
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +3 / +3
Query: 33 TVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFES 212
T F+GIS+LVDVGGG G + I +P ++ DLP V+ AP + +++V GDMF S
Sbjct: 642 TGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFAS 821
Query: 213 VSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVET 392
V DA+ LK++ H+W D C++ L NC KA+ G +I+ I+ ++S + K V T
Sbjct: 822 VPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVST 1001
>gb|CO512262.1|CO512262 s13dSG03H0600048_114038 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 588
Score = 101 bits (216), Expect = 9e-023
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F I LVDVGGG G I +P+++ DLP V+ AP V +V GDMFE +
Sbjct: 328 FDHIKKLVDVGGGNGINLNLITSKYPYIQGVNFDLPQVIEHAPTYPGVTHVGGDMFEGIP 507
Query: 219 SADAVFLKSIIHDWGDADCVKILKNC 296
DA+FLK+I+H+W D C+K+LKNC
Sbjct: 508 KGDAIFLKTILHNWDDEHCLKLLKNC 585
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,910,750
Number of Sequences: 7669
Number of extensions: 73113
Number of successful extensions: 791
Number of sequences better than 1.0e-020: 9
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 204749870
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)