TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2405245.2.3
         (2175 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO516976.1|CO516976  s13dSG81D0100010_468498 Glandular tr...   164   5e-041

>gb|CO516976.1|CO516976 s13dSG81D0100010_468498 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 299

 Score =  164 bits (352), Expect = 5e-041
 Identities = 65/74 (87%), Positives = 69/74 (93%)
 Frame = +2 / +3

                                                                       
Query: 92  KMVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISKPRIEAWNSDTLPIYEPGLDDVVK 271
           KMVKICCIGAGYVGGPTMAVIALKCP+IEV VVDI+ PRI AWNSD LPIYEPGLDDVVK
Sbjct: 78  KMVKICCIGAGYVGGPTMAVIALKCPEIEVAVVDIATPRINAWNSDHLPIYEPGLDDVVK 257

                         
Query: 272 QCRGRNLFFSTDVE 313
           +C G+NLFFSTDVE
Sbjct: 258 KCTGKNLFFSTDVE 299




 Score =  132 bits (282), Expect = 2e-031
 Identities = 56/73 (76%), Positives = 65/73 (89%)
 Frame = -1 / -2

                                                                       
Query: 312 STSVLKKRFLPLHCFTTSSRPGS*IGRVSLFQASMRGLEMSTTTTSMSGHLRAMTAMVGP 133
           STSVLKKRF P+H FTTSSRPGS IG+ SLFQA +RG+ +STT TS+SGH +A+TA+VGP
Sbjct: 298 STSVLKKRFFPVHFFTTSSRPGSYIGKWSLFQALIRGVAISTTATSISGHFKAITAIVGP 119

                        
Query: 132 PT*PAPMQQIFTI 94
           PT*PAPMQQIFTI
Sbjct: 118 PT*PAPMQQIFTI 80



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 17,498,451
Number of Sequences: 7669
Number of extensions: 256462
Number of successful extensions: 1945
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 45
effective length of database: 903,463
effective search space used: 613451377
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)