TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2404863.2.1
         (672 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY639647.1|  Medicago sativa GMPase (GMP) mRNA, complete cds   192   5e-050

>gb|AY639647.1| Medicago sativa GMPase (GMP) mRNA, complete cds
          Length = 1181

 Score =  192 bits (413), Expect = 5e-050
 Identities = 77/87 (88%), Positives = 83/87 (95%)
 Frame = +1 / +3

                                                                        
Query: 1    GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
            GPGC+VE GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVGQWAR+ENMTILGEDVH  D
Sbjct: 921  GPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCD 1100

                                       
Query: 181  EVYSNGGVVLPQKEIKSSILKPEIVM* 261
            E+YSNGGVVLP KEIK++ILKPEIVM*
Sbjct: 1101 EIYSNGGVVLPHKEIKTNILKPEIVM* 1181




 Score =  109 bits (233), Expect(2) = 6e-028
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = -2 / -2

                                                               
Query: 155  RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
            R+VIFS RAHCPTVECHPI+L EMQACFLIRTPR+TVQRESLTP ST  PG
Sbjct: 1075 RIVIFSTRAHCPTVECHPIILLEMQACFLIRTPRITVQRESLTPDSTMQPG 923




 Score = 28.6 bits (56), Expect(2) = 6e-028
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2 / -2

                              
Query: 260  HMTISGFKMLDLISFCGR 207
            HMTISGF++  LIS  G+
Sbjct: 1180 HMTISGFRIFVLISLWGK 1127



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 6,373,355
Number of Sequences: 7669
Number of extensions: 89181
Number of successful extensions: 1103
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 167691070
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)