TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805016.2.1
(1645 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ000995.1|MSDNAJ Medicago sativa mRNA for DnaJ-like pr... 477 0.0
gb|AF069507.1|AF069507 Medicago sativa DnaJ-like protein Ms... 139 e-166
gb|AJ248336.1|AJ248336 AJ248336 Medicago sativa subsp. x va... 341 e-110
emb|Z71997.1|MSDNAJLP M.sativa mRNA for DnaJ-like protein 179 1e-063
gb|CO513103.1|CO513103 s13dSG89H0300028_122132 Glandular tr... 173 4e-056
>emb|AJ000995.1|MSDNAJ Medicago sativa mRNA for DnaJ-like protein
Length = 1545
Score = 477 bits (1035), Expect(3) = 0.0
Identities = 189/268 (70%), Positives = 222/268 (82%)
Frame = -3 / +1
Query: 1247 EDVVHTMKVSLDDLYNGTTKKLSLSRSALXXXXXXXXXXXXXXGTCHGCRGAGMRTITRQ 1068
EDVVH++KVSL+D+YNGTTKKLSLSR+AL G C GC+G GM+ RQ
Sbjct: 418 EDVVHSIKVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRRQ 597
Query: 1067 IGLGMIQQMNTVCPECKGSGEIISDKDKCPSCKGNKVVQEKKVLEVHVEKGMQHNQKIVF 888
IGLGMIQQM VCP+CKG+GE+IS++D+CP CKGNK+ QEKKVLEVHVEKGMQ KIVF
Sbjct: 598 IGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGHKIVF 777
Query: 887 QGQADEAPDTVTGDIVFVLQLKDHPKFKRMYDDLYVEHTISLTEALCGFQFVLTHLDGRQ 708
+GQADE PDT+TGDIVFVLQ+K HPKF+R DDL++EH +SLT+ALCGFQF +THLDGRQ
Sbjct: 778 EGQADELPDTITGDIVFVLQVKGHPKFRRERDDLHIEHNLSLTDALCGFQFNVTHLDGRQ 957
Query: 707 LLIKSDPGEVIKPGQHKAINDEGMPQHGRPFMKGRLFVEFNVEFPEPGVLSPAQCRSLEK 528
LL+KS+PGEVIKPGQHKAINDEGMPQHGRPFMKGRL+++F+V+FP+ G LSP+Q LEK
Sbjct: 958 LLVKSNPGEVIKPGQHKAINDEGMPQHGRPFMKGRLYIKFSVDFPDSGFLSPSQSLELEK 1137
Query: 527 ILPPKPGSQLSDMELDQCEETTLHDVNI 444
ILP K LS E+D CEETTLHDVNI
Sbjct: 1138 ILPQKTSKNLSQKEVDDCEETTLHDVNI 1221
Score = 363 bits (788), Expect(3) = e-128
Identities = 163/278 (58%), Positives = 179/278 (64%)
Frame = +1 / -2
Query: 427 RLISSSMLTXXXXXXXXXXXXXXXXWLPGFGGRIFSNERHWAGESTPGSGNSTLNSTNRR 606
RLISS++LT +L F G IFSN R W GE P SG STLN RR
Sbjct: 1238 RLISSAILTSCRVVSSQSSTSFWDKFLLVF*GNIFSNSRLWLGERKPESGKSTLNLMYRR 1059
Query: 607 PFMKGRPC*GIPSSLMALC*PGLITSPGSDLIRSCRPSR*VRTNWKPHNASVREIVCSTY 786
PFM G PC GIPSS +ALC*PGL+TSPG DL SC PSR V NWKP ASV+ +CS
Sbjct: 1058 PFMNGLPCCGIPSSFIALC*PGLMTSPGFDLTNSCLPSRCVTLNWKPQRASVKLKLCSM* 879
Query: 787 KSSYILLNFGWSLSCKTKTMSPVTVSGASSA*PWNTIFWLCCIPXXXXXXXXXXXXXXLF 966
+SS L NFG +CKTKTMSPV VSG+SSA P NTI CCIP LF
Sbjct: 878 RSSRSLRNFGCPFTCKTKTMSPVIVSGSSSACPSNTIL*PCCIPFSTCTSSTFFS*VILF 699
Query: 967 PLQLGHLSLSLMISPDPLHSGQTVFICWIMPRPICLVIVLIPAPRQPWHVPDAPLLDPFP 1146
PL GHLSLSLM SP PL SGQT IC IMP PICL+++ IP P P H+P PL +PFP
Sbjct: 698 PLH*GHLSLSLMTSPVPLQSGQTCCIC*IMPSPICLLVIFIPVPWHPKHLPAVPLFEPFP 519
Query: 1147 LHLEHKALRDKDSFLVVPLYRSSKETFIVCTTSSPRFC 1260
LH EH A + DSF VVPLY SSKETFI CTTSSP FC
Sbjct: 518 LHFEHSAFLESDSFFVVPLYTSSKETFIECTTSSPCFC 405
Score = 213 bits (460), Expect(3) = 0.0
Identities = 82/104 (78%), Positives = 95/104 (91%)
Frame = -3 / +1
Query: 1616 STMFGRMPRKSSNNTKYYEVLGVSKTASQDELKKAYRKAAIKNHPDKGGDPEKFKELSQA 1437
S MFGR P + S+NTKYY++LGVSK+AS+DE+KKAYRKAA+KNHPDKGGDPEKFKEL QA
Sbjct: 52 SIMFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQA 231
Query: 1436 YDVLSDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDIFEQLF 1305
Y+VLSDPEK+E+YDQYGEDALKEGMGGG+ S FH+PFDIFE F
Sbjct: 232 YEVLSDPEKKELYDQYGEDALKEGMGGGAGSSFHNPFDIFESFF 363
Score = 133 bits (285), Expect(4) = 6e-064
Identities = 66/153 (43%), Positives = 91/153 (59%)
Frame = +3 / -1
Query: 450 DIVKGGLLALVQLHVRQLAPWFRRKDLLQRTALGRGEHTRLGKLHVEFNKQTTLHERTAM 629
DI++GGLL ++ L + Q+ R L AL G+ TR+ +++ + + +LHER M
Sbjct: 1215 DIMQGGLLTIIYLLLGQVLACLLR*YLF*FQALAWGKKTRIREINTKLDV*ASLHERPTM 1036
Query: 630 LRHTFIVNGLVLTWFNNLPGVRFDQKLSPIKMSKNKLEATQCFGERDCVLNI*VIVHPLK 809
L H+ I+ +LTW ++ GVRFDQ L IKM KLEAT+ V N+ VI P K
Sbjct: 1035 LWHSLIIYSFMLTWLDDFAGVRFDQ*LPSIKMCDIKLEATESIS*AQIVFNVKVITLPPK 856
Query: 810 FWMVFKLQDKNNVSCNRIRSFISLTLEYNLLVM 908
M LQDKN VSC+ IR FISL+ EYNL+ +
Sbjct: 855 LRMSLYLQDKNYVSCDCIREFISLSFEYNLVTL 757
Score = 117 bits (251), Expect(4) = 3e-057
Identities = 63/162 (38%), Positives = 91/162 (56%)
Frame = -2 / +3
Query: 1287 WGW*LKRTQTKAW*RCGAYYEGFLRRSVQWDNQETIFIAECFVLQVQGERIQEWGIRNMP 1108
W W R +T+A RCGA+Y+GFL V +E I EC VL++ ER ++W +
Sbjct: 378 WWWSFTRKKTEARRRCGAFYKGFLGGCV*RHYKEAITF*ECTVLKM*RERFKKWNCWKVF 557
Query: 1107 WLSWCWNENNHKTDRPWHDPTDEHCLP*MQRIR*DHK*QGQMPKL*RKQGSPGEEGVRGS 928
W+ E+ K + HD T+ L *+QR R H *+ MP + KQ +EG G+
Sbjct: 558 WMPGHRYEDYQKANWTGHDSTNATRLS*LQRNRRGH**ER*MPSMQGKQDYSRKEGAGGA 737
Query: 927 CGERNAT*PKDCIPGSS**SS*YGYRRHCFCLAT*RPSKI*E 802
CG+ +A +DCI +S**+ *Y +RRH FCLA+ S++ E
Sbjct: 738 CGKGDAAGSQDCIRRTS**TP*YNHRRHSFCLASKGTSEVSE 863
Score = 106 bits (227), Expect(3) = e-128
Identities = 48/102 (47%), Positives = 65/102 (63%)
Frame = +3 / -1
Query: 1305 KKLLKNVKRAMEITAAASSHSFLKGIFSILVIDLPLLRVTKNIISLRQLFKLLRVSTLIR 1484
KK +N+KR M+ + AS HSF KGIF+IL+I L R+ ++ I L QL +LLR+ TLI
Sbjct: 363 KK*FENIKRIMK*ASCASPHSFFKGIFTILIIQFFLFRIAQHFICLAQLLELLRIPTLIW 184
Query: 1485 MVFYGSFSVCFLKLILTCGLRHTKNLVILGIVTTLPWHASKH 1610
MV + S+ FL I T +TKN+VI G++T W A KH
Sbjct: 183 MVLHRCLSIGFLDFIFTSTF*NTKNIVIFGVITLPCWSAPKH 58
Score = 102 bits (218), Expect(4) = 6e-064
Identities = 49/76 (64%), Positives = 54/76 (71%)
Frame = +1 / -2
Query: 1390 YWS*ISLFSGSLRTS*A*DSSLNFSGSPPLSGWFFMAAFLYAFLSSS*LAVLDTPRTS*Y 1569
Y S S FSGSL TS A +SLNFSGSPPLSGWFF+AAFL AFL SS LA+ +TPR S*Y
Sbjct: 278 Y*SYSSFFSGSLNTSYAWPNSLNFSGSPPLSGWFFIAAFL*AFLISSSLALFETPRIS*Y 99
Query: 1570 XXXXXXXXGMRPNMVD 1617
G RPNM+D
Sbjct: 98 LVLSLFLVGPRPNMID 51
Score = 88.1 bits (186), Expect(3) = 6e-025
Identities = 63/150 (42%), Positives = 70/150 (46%)
Frame = +2 / -3
Query: 608 PS*KDGHAEAYLHR*WPCVDLV**PPRGQI*SEAVAHQDE*EQTGSHTMLR*ERLCAQHI 787
PS* H A+ H VDL ** RG I* HQD * TGSH + C Q
Sbjct: 1057 PS*TAYHVVAFPHHL*LYVDLA**LRRGSI*PIVAFHQDV*H*TGSHREHQLSSNCVQCE 878
Query: 788 SHRTSS*ILDGL*VARQKQCLL*PYQELHQLDPGIQSFGYVAFLSPHEPLTPSSPGLPCF 967
H S D +ARQK CLL* YQ +HQL IQS A PH P PS CF
Sbjct: 877 GHHAPSETSDVPLLARQKLCLL*LYQGVHQLVLRIQSCDPAASPFPHAPPAPSFLE*SCF 698
Query: 968 LYSLGICPCHL*SHLILCIQGKQCSSVGSC 1057
GI H * L LC Q ++ + V SC
Sbjct: 697 PCIEGIYLSH**PRLFLCSQDRRVAFVESC 608
Score = 77.6 bits (163), Expect(4) = 3e-057
Identities = 45/104 (43%), Positives = 57/104 (54%)
Frame = -1 / +2
Query: 1618 YQPCLDACQGRVVTIPSITRFLVCLRPQVRMSLRKHTEKLP*KTILIRVETLRSLKSCLK 1439
+Q CL A Q V P+IT FLV + V+M RK E+ *+TI IRV LRS +S K
Sbjct: 50 HQSCLGADQQGRVITPNITIFLVFQKVLVKMKSRKPIERQR*RTIQIRVGILRSSRSWAK 229
Query: 1438 LMMFLVTRRRGRSMTSMEKMPLRKEWEEAAAVISIALLTFLSNF 1307
M +R M +M KMPL+KEW EA I L F ++F
Sbjct: 230 HMKC*AILKRKNCMINMVKMPLKKEWGEAQEAHFIIRLIFSNHF 361
Score = 73.5 bits (154), Expect(5) = 2e-035
Identities = 39/95 (41%), Positives = 53/95 (55%)
Frame = -1 / +2
Query: 1057 A*SNR*TLFALNAKDQVRS*VTRTNAQAVKETXXXXXXXXXRFMWRKECNITKRLYSRVK 878
A* N+ L AK+Q RS V +A +ET R MW++ C+ RLYS+ K
Sbjct: 608 A*FNKCNTSVLTAKEQARSLVREIDALNARETRLLKKRRCWRCMWKRGCSRVTRLYSKDK 787
Query: 877 LMKLLIRLQETLFLSCNLKTIQNLRGCTMTYMLST 773
LM LI+ QET FLSC + I++ G MT+ L+T
Sbjct: 788 LMNSLIQSQET*FLSCK*RDIRSFGGSVMTFTLNT 892
Score = 61.1 bits (127), Expect(5) = 2e-035
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = -1 / +2
Query: 1315 SNFFRVLAPLGVVAQEDADKSVVKMWCIL*RFP*TICTMGQPRNYLYRGVLCAPSARGKD 1136
SN F V A + VV D+S KMWCIL*RFP +C R+Y + G+ CA + +GK
Sbjct: 350 SNHFLVQALVVVVLHAQEDRSKEKMWCIL*RFPWRMCITALQRSYHFLGMHCAQNVKGKV 529
Query: 1135 PRV 1127
+V
Sbjct: 530 QKV 538
Score = 41.8 bits (85), Expect(3) = 6e-025
Identities = 27/62 (43%), Positives = 29/62 (46%)
Frame = +2 / -3
Query: 1433 HKLETAL*TSQGLHPYQDGFLWQLFCMLS*AHPDLRS*THQEPRNTWYCYYSSLACVQTW 1612
H L *TSQ HPY DG F LS* H HQE RN W + S L QT
Sbjct: 235 HMLGPTP*TSQDPHPYLDGSSSLPFYRLS*FHLH*HFLKHQEYRNIWCYHSSLLVRAQT* 56
Query: 1613 LI 1618
L+
Sbjct: 55 LM 50
Score = 41.8 bits (85), Expect(4) = 3e-057
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = -2 / +3
Query: 750 VWLPVCSYSS*WATASDQI*PRGGY*TRSTQGH*R*RYASAWPSFHEGSSV 598
+WLPV ++S*W QI PR + RST + * A+ W + HEG+ +
Sbjct: 915 LWLPV*CHTS*WKATIGQIEPRRSHQARST*SYK**GNATTW*AVHEGTPI 1067
Score = 37.7 bits (76), Expect(4) = 6e-064
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3 / -1
Query: 1137 SFPLALGAQSTPR*R*FLGCPIVQIV*GNLHSMHHIF 1247
+FP AQ PR * L ++ I+ GNL+ MHHIF
Sbjct: 528 TFPFTF*AQCIPRK**LLCSAVIHILQGNLYRMHHIF 418
Score = 37.3 bits (75), Expect(4) = 3e-057
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -2 / +3
Query: 561 ALPCPVPFVGEDPSAETREPTVGHGAGPVRGDHPSRCQHRRGD 433
+ P P P + +D +++ ++ V G + GDHP+ CQ+ RGD
Sbjct: 1104 SFPKPKPGIRKDITSKDKQELVPKGGR*L*GDHPA*CQYCRGD 1232
Score = 36.8 bits (74), Expect(5) = 2e-035
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1 / +2
Query: 748 VASSLFLLILMGDSF*SNLTPGRLLNQVNTRPLTMKVCLSMAVLS*R 608
VASSL ILM ++ SN TP + +QVN + M+ C +M S*R
Sbjct: 917 VASSLMSHILMEGNYWSNRTPAKSSSQVNIKL*MMRECHNMVGRS*R 1057
Score = 35.9 bits (72), Expect(5) = 2e-035
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / +3
Query: 1617 INHVWTHAKEE**QYQVLRGSWC 1549
INHVW +E * +Q+LR SWC
Sbjct: 51 INHVWARTNKEE**HQILRYSWC 119
Score = 34.1 bits (68), Expect(4) = 6e-064
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3 / -1
Query: 963 VSFTAWAFVLVTYDLT*SFAFRANSVHLLDHAKAYL 1070
VS A + +T DL SFA R + +HLL+HA++ L
Sbjct: 702 VSLALRASISLTNDLACSFAVRTDVLHLLNHAQSNL 595
Score = 25.4 bits (49), Expect(3) = 6e-025
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = +2 / -3
Query: 1127 HSWILSPCTWSTKHSAIKIVSWLSHCTDRLRKPS*YAPHLHHAFVCVLLSYH 1282
H LS ST HS I S T RKP * APHL A V + + H
Sbjct: 538 HFLNLSLYILSTVHS*KVIASL*CRYTHPPRKPL*NAPHLLLASVFLRVKDH 383
Score = 23.5 bits (45), Expect(3) = 0.0
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +1
Query: 368 PRVQCAQQ* 342
PRVQCAQQ*
Sbjct: 1303 PRVQCAQQ* 1329
Score = 23.1 bits (44), Expect(5) = 2e-035
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2 / +3
Query: 1518 ESIQKSCHKKPS**GWRP*EV 1456
ES+ K ++PS *GW *EV
Sbjct: 150 ESL*KGSDEEPSR*GWGS*EV 212
Score = 22.1 bits (42), Expect(3) = e-128
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / -2
Query: 343 YCWAHCTLG 369
YC AHCT G
Sbjct: 1328 YC*AHCTRG 1302
>gb|AF069507.1|AF069507 Medicago sativa DnaJ-like protein MsJ1 gene, complete cds
Length = 4449
Score = 139 bits (298), Expect(8) = e-166
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = -3 / +2
Query: 668 GQHKAINDEGMPQHGRPFMKGRLFVEFNVEFPEPGVLSPAQCRSLEKILPPKPGSQLSDM 489
GQHKAINDEGMPQHGRPFMKGRL+++F+V+FP+ G LSP+Q LEKILP K LS
Sbjct: 3194 GQHKAINDEGMPQHGRPFMKGRLYIKFSVDFPDSGFLSPSQSLELEKILPQKTSKNLSQK 3373
Query: 488 ELDQCEETTLHDVNI 444
E+D CEETTLHDVNI
Sbjct: 3374 EVDDCEETTLHDVNI 3418
Score = 136 bits (292), Expect(8) = e-166
Identities = 52/67 (77%), Positives = 62/67 (92%)
Frame = -3 / +3
Query: 866 PDTVTGDIVFVLQLKDHPKFKRMYDDLYVEHTISLTEALCGFQFVLTHLDGRQLLIKSDP 687
PDT+TGDIVFVLQ+K HPKF+R DDL++EH +SLT+ALCGFQF +THLDGRQLL+KS+P
Sbjct: 2913 PDTITGDIVFVLQVKGHPKFRRERDDLHIEHNLSLTDALCGFQFNVTHLDGRQLLVKSNP 3092
Query: 686 GEVIKPG 666
GEVIKPG
Sbjct: 3093 GEVIKPG 3113
Score = 109 bits (232), Expect(8) = e-166
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = -3 / +1
Query: 1460 KFKELSQAYDVLSDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDIFEQLF 1305
+FKEL QAY+VLSDPEK+E+YDQYGEDALKEGMGGG+ S FH+PFDIFE F
Sbjct: 979 QFKELGQAYEVLSDPEKKELYDQYGEDALKEGMGGGAGSSFHNPFDIFESFF 1134
Score = 107 bits (229), Expect(8) = e-166
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = -3 / +1
Query: 1616 STMFGRMPRKSSNNTKYYEVLGVSKTASQDELKKAYRKAAIKNHPDKGGDPEK 1458
S MFGR P + S+NTKYY++LGVSK+AS+DE+KKAYRKAA+KNHPDKGGDPEK
Sbjct: 52 SIMFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEK 210
Score = 97.7 bits (207), Expect(8) = e-166
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -3 / +2
Query: 1013 SGEIISDKDKCPSCKGNKVVQEKKVLEVHVEKGMQHNQKIVFQGQADE 870
+GE+IS++D+CP CKGNK+ QEKKVLEVHVEKGMQ KIVF+GQADE
Sbjct: 2609 AGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGHKIVFEGQADE 2752
Score = 96.4 bits (204), Expect(7) = e-109
Identities = 42/67 (62%), Positives = 47/67 (70%)
Frame = +1 / -3
Query: 667 PGLITSPGSDLIRSCRPSR*VRTNWKPHNASVREIVCSTYKSSYILLNFGWSLSCKTKTM 846
PGL+TSPG DL SC PSR V NWKP ASV+ +CS +SS L NFG +CKTKTM
Sbjct: 3112 PGLMTSPGFDLTNSCLPSRCVTLNWKPQRASVKLKLCSM*RSSRSLRNFGCPFTCKTKTM 2933
Query: 847 SPVTVSG 867
SPV VSG
Sbjct: 2932 SPVIVSG 2912
Score = 92.7 bits (196), Expect(7) = e-109
Identities = 44/85 (51%), Positives = 49/85 (57%)
Frame = +1 / -1
Query: 427 RLISSSMLTXXXXXXXXXXXXXXXXWLPGFGGRIFSNERHWAGESTPGSGNSTLNSTNRR 606
RLISS++LT +L F G IFSN R W GE P SG STLN RR
Sbjct: 3435 RLISSAILTSCRVVSSQSSTSFWDKFLLVF*GNIFSNSRLWLGERKPESGKSTLNLMYRR 3256
Query: 607 PFMKGRPC*GIPSSLMALC*PGLIT 681
PFM G PC GIPSS +ALC*P +T
Sbjct: 3255 PFMNGLPCCGIPSSFIALC*PTKLT 3181
Score = 82.6 bits (174), Expect(7) = e-109
Identities = 36/55 (65%), Positives = 40/55 (72%)
Frame = +1 / -2
Query: 1453 LNFSGSPPLSGWFFMAAFLYAFLSSS*LAVLDTPRTS*YXXXXXXXXGMRPNMVD 1617
L FSGSPPLSGWFF+AAFL AFL SS LA+ +TPR S*Y G RPNM+D
Sbjct: 215 LTFSGSPPLSGWFFIAAFL*AFLISSSLALFETPRIS*YLVLSLFLVGPRPNMID 51
Score = 78.0 bits (164), Expect(7) = e-109
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1 / -2
Query: 1138 PFPLHLEHKALRDKDSFLVVPLYRSSKETFIVCTTSSPRFC 1260
P+PLH EH A + DSF VVPLY SSKETFI CTTSSP FC
Sbjct: 1400 PYPLHFEHSAFLESDSFFVVPLYTSSKETFIECTTSSPCFC 1278
Score = 69.8 bits (146), Expect(7) = e-109
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +1 / -3
Query: 1009 PDPLHSGQTVFICWIMPRPICLVIVLIPAPRQPWHVPDAPLLDPF 1143
P PL SGQT IC IMP PICL+++ IP P P H+P PL +PF
Sbjct: 2533 PVPLQSGQTCCIC*IMPSPICLLVIFIPVPWHPKHLPAVPLFEPF 2399
Score = 68.4 bits (143), Expect(6) = 8e-030
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3 / -2
Query: 666 TWFNNLPGVRFDQKLSPIKMSKNKLEATQCFGERDCVLNI*VIVHPLKFWMVFKLQDKNN 845
TW ++ GVRFDQ L IKM KLEAT+ V N+ VI P K M LQDKN
Sbjct: 3113 TWLDDFAGVRFDQ*LPSIKMCDIKLEATESIS*AQIVFNVKVITLPPKLRMSLYLQDKNY 2934
Query: 846 VSCNRIR 866
VSC+ IR
Sbjct: 2933 VSCDCIR 2913
Score = 67.5 bits (141), Expect(8) = e-166
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -3 / +3
Query: 1112 CHGCRGAGMRTITRQIGLGMIQQMNTVCPECKGSG 1008
C GC+G GM+ RQIGLGMIQQM VCP+CKG+G
Sbjct: 2430 CFGCQGTGMKITRRQIGLGMIQQMQHVCPDCKGTG 2534
Score = 59.7 bits (124), Expect(8) = e-166
Identities = 24/29 (82%), Positives = 29/29 (100%)
Frame = -3 / +1
Query: 1247 EDVVHTMKVSLDDLYNGTTKKLSLSRSAL 1161
EDVVH++KVSL+D+YNGTTKKLSLSR+AL
Sbjct: 1291 EDVVHSIKVSLEDVYNGTTKKLSLSRNAL 1377
Score = 58.8 bits (122), Expect(7) = e-109
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +3 / -1
Query: 1305 KKLLKNVKRAMEITAAASSHSFLKGIFSILVIDLPLLRVTKNIISLRQLFKLL 1463
KK +N+KR M+ + AS HSF KGIF+IL+I L R+ ++ I L QL +L+
Sbjct: 1134 KK*FENIKRIMK*ASCASPHSFFKGIFTILIIQFFLFRIAQHFICLAQLLELI 976
Score = 53.8 bits (111), Expect(6) = 8e-030
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +3 / -1
Query: 1458 LLRVSTLIRMVFYGSFSVCFLKLILTCGLRHTKNLVILGIVTTLPWHASKH 1610
LLR+ TLI MV + S+ FL I T +TKN+VI G++T W A KH
Sbjct: 210 LLRIPTLIWMVLHRCLSIGFLDFIFTSTF*NTKNIVIFGVITLPCWSAPKH 58
Score = 51.5 bits (106), Expect(8) = 2e-037
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1 / +2
Query: 1282 VVAQEDADKSVVKMWCIL*RFP*TICTMGQPRNYLYRGVLCAPSARG 1142
VV D+S KMWCIL*RFP +C R+Y + G+ CA + +G
Sbjct: 1256 VVLHAQEDRSKEKMWCIL*RFPWRMCITALQRSYHFLGMHCAQNVKG 1396
Score = 51.0 bits (105), Expect(7) = e-109
Identities = 25/48 (52%), Positives = 26/48 (54%)
Frame = +1 / -1
Query: 868 ASSA*PWNTIFWLCCIPXXXXXXXXXXXXXXLFPLQLGHLSLSLMISP 1011
+SSA P NTI CCIP LFPL GHLSLSLM SP
Sbjct: 2754 SSSACPSNTIL*PCCIPFSTCTSSTFFS*VILFPLH*GHLSLSLMTSP 2611
Score = 49.2 bits (101), Expect(8) = 2e-037
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = -1 / +2
Query: 1618 YQPCLDACQGRVVTIPSITRFLVCLRPQVRMSLRKHTEKLP*KTILIRVETLRSLKSCLK 1439
+Q CL A Q V P+IT FLV + V+M RK E+ *+TI IRV LR L S L
Sbjct: 50 HQSCLGADQQGRVITPNITIFLVFQKVLVKMKSRKPIERQR*RTIQIRVGILRRLASWLL 229
Query: 1438 LM 1433
L+
Sbjct: 230 LL 235
Score = 37.3 bits (75), Expect(8) = 2e-037
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -2 / +1
Query: 561 ALPCPVPFVGEDPSAETREPTVGHGAGPVRGDHPSRCQHRRGD 433
+ P P P + +D +++ ++ V G + GDHP+ CQ+ RGD
Sbjct: 3301 SFPKPKPGIRKDITSKDKQELVPKGGR*L*GDHPA*CQYCRGD 3429
Score = 36.8 bits (74), Expect(8) = 2e-037
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -1 / +2
Query: 1459 SLKSCLKLMMFLVTRRRGRSMTSMEKMPLRKEWEEAAAVISIALLTFLSNF 1307
S +S K M +R M +M KMPL+KEW EA I L F ++F
Sbjct: 980 SSRSWAKHMKC*AILKRKNCMINMVKMPLKKEWGEAQEAHFIIRLIFSNHF 1132
Score = 34.5 bits (69), Expect(6) = 8e-030
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3 / -1
Query: 1143 PLALGAQSTPR*R*FLGCPIVQIV*GNLHSMHHIF 1247
P AQ PR * L ++ I+ GNL+ MHHIF
Sbjct: 1395 PFTF*AQCIPRK**LLCSAVIHILQGNLYRMHHIF 1291
Score = 34.5 bits (69), Expect(8) = 2e-037
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1 / +1
Query: 865 LIRLQETLFLSCNLKTIQNLRGCTMTYMLST 773
LI+ QET FLSC + I++ G MT+ L+T
Sbjct: 2914 LIQSQET*FLSCK*RDIRSFGGSVMTFTLNT 3006
Score = 34.1 bits (68), Expect(8) = 2e-037
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1 / +3
Query: 1012 QVRS*VTRTNAQAVKETXXXXXXXXXRFMWRKECNITKRLYSRVKLM 872
Q RS V +A +ET R MW++ C+ RLYS+ KLM
Sbjct: 2610 QARSLVREIDALNARETRLLKKRRCWRCMWKRGCSRVTRLYSKDKLM 2750
Score = 29.0 bits (57), Expect(8) = 2e-037
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2 / +2
Query: 1167 CFVLQVQGERIQEWGIRNMPWLSWCWNENNHKTDRPWHDPTDEHCLP*MQRIR* 1006
C + ER ++W + W+ E+ K + HD T+ L *+QR R*
Sbjct: 2375 CSEFLIYQERFKKWNCWKVFWMPGHRYEDYQKANWTGHDSTNATRLS*LQRNR* 2536
Score = 28.1 bits (55), Expect(8) = 2e-037
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2 / +2
Query: 750 VWLPVCSYSS*WATASDQI*PRGGY*TR 667
+WLPV ++S*W QI PR + R
Sbjct: 3029 LWLPV*CHTS*WKATIGQIEPRRSHQAR 3112
Score = 27.6 bits (54), Expect(6) = 8e-030
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3 / -2
Query: 1005 LT*SFAFRANSVHLLDHAKAYL 1070
+T SFA R + +HLL+HA++ L
Sbjct: 2537 ITCSFAVRTDVLHLLNHAQSNL 2472
Score = 27.2 bits (53), Expect(6) = 8e-030
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +2 / -2
Query: 860 YQELHQLDPGIQSFGYVAFLSPHEPLTPSSPGLPCFLYSLGICPCH 997
Y +HQL IQS A PH P PS CF GI H
Sbjct: 2762 YLRVHQLVLRIQSCDPAASPFPHAPPAPSFLE*SCFPCIEGIYLSH 2625
Score = 24.9 bits (48), Expect(6) = 8e-030
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1 / -2
Query: 1390 YWS*ISLFSGSLRTS*A*DSSLN 1458
Y S S FSGSL TS A +SLN
Sbjct: 1049 Y*SYSSFFSGSLNTSYAWPNSLN 981
Score = 23.5 bits (45), Expect(8) = e-166
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +2
Query: 368 PRVQCAQQ* 342
PRVQCAQQ*
Sbjct: 3500 PRVQCAQQ* 3526
>gb|AJ248336.1|AJ248336 AJ248336 Medicago sativa subsp. x varia young root nodule Medicago
sativa subsp. x varia cDNA clone MsNod658, mRNA sequence
Length = 1004
Score = 341 bits (740), Expect(3) = e-110
Identities = 134/181 (74%), Positives = 155/181 (85%)
Frame = -3 / +3
Query: 1112 CHGCRGAGMRTITRQIGLGMIQQMNTVCPECKGSGEIISDKDKCPSCKGNKVVQEKKVLE 933
C GC+G GM+ R +G MIQQM C ECKG+GE I+DKD+CP CKG KVVQEKKVLE
Sbjct: 18 CAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLE 197
Query: 932 VHVEKGMQHNQKIVFQGQADEAPDTVTGDIVFVLQLKDHPKFKRMYDDLYVEHTISLTEA 753
VHVEKGMQ++QKI F G+ADEAPDTVTGDIVFVLQ K+HPKFKR +DL+VEHT+SLTEA
Sbjct: 198 VHVEKGMQNSQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKSEDLFVEHTLSLTEA 377
Query: 752 LCGFQFVLTHLDGRQLLIKSDPGEVIKPGQHKAINDEGMPQHGRPFMKGRLFVEFNVEFP 573
LCGFQFVLTHLDGRQLLIKS+PGEV+KP +KAINDEGMP + RPFMKG+L++ F VEFP
Sbjct: 378 LCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYIHFTVEFP 557
Query: 572 E 570
+
Sbjct: 558 D 560
Score = 213 bits (460), Expect(3) = 4e-062
Identities = 103/186 (55%), Positives = 115/186 (61%)
Frame = +1 / -2
Query: 571 SGNSTLNSTNRRPFMKGRPC*GIPSSLMALC*PGLITSPGSDLIRSCRPSR*VRTNWKPH 750
SGNST+ PF+ G GIPSSL+AL GL TSPG DLIRS RPS+*V TNWKPH
Sbjct: 559 SGNSTVK*M*SLPFINGLWYIGIPSSLIALYESGLTTSPGFDLIRSWRPSK*VSTNWKPH 380
Query: 751 NASVREIVCSTYKSSYILLNFGWSLSCKTKTMSPVTVSGASSA*PWNTIFWLCCIPXXXX 930
ASVR+ VCST +SS LLN G S T T+SPVTVSGASSA P N IF L CIP
Sbjct: 379 KASVRDSVCSTKRSSLFLLNLGCSFC*STNTISPVTVSGASSASPGNVIF*LFCIPFST* 200
Query: 931 XXXXXXXXXXLFPLQLGHLSLSLMISPDPLHSGQTVFICWIMPRPICLVIVLIPAPRQPW 1110
PL G SLSL++SP PLHS Q ICWI+ P CL+ IP P QP
Sbjct: 199 TSSTFFSCTTFSPLHCGQRSLSLIVSPVPLHSLQGCCICWIIDGPRCLIETFIPVP*QPA 20
Query: 1111 HVPDAP 1128
H +AP
Sbjct: 19 HFMEAP 2
Score = 95.5 bits (202), Expect(2) = 4e-023
Identities = 46/113 (40%), Positives = 65/113 (57%)
Frame = +3 / -1
Query: 570 LGKLHVEFNKQTTLHERTAMLRHTFIVNGLVLTWFNNLPGVRFDQKLSPIKMSKNKLEAT 749
+G+ H E N + LH+ + RH+ IVN LV +N GVRFD+KL+ I++SK+KLE T
Sbjct: 560 VGEFHSEVNVKLALHKWPLVHRHSLIVNSLV*IRLDNFSGVRFDKKLATIQVSKHKLETT 381
Query: 750 QCFGERDCVLNI*VIVHPLKFWMVFKLQDKNNVSCNRIRSFISLTLEYNLLVM 908
Q +R CVL V + + F L+ K N+ N + FI T E NLL +
Sbjct: 380 QSLSKRQCVLYKKVFTLSFELGVFFLLKHKYNIPSNCVWCFIGFTRECNLLTV 222
Score = 68.4 bits (143), Expect(3) = e-110
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = -3 / +3
Query: 569 PGVLSPAQCRSLEKILPPKPGSQLSDMELDQCEETTLHDVNI 444
P LS Q + L+ +LP KP SQL+DME+D+CEETTLHDVN+
Sbjct: 555 PDTLSLDQVKGLQAVLPAKPSSQLTDMEIDECEETTLHDVNM 680
Score = 64.3 bits (134), Expect(3) = 8e-024
Identities = 37/107 (34%), Positives = 54/107 (50%)
Frame = -2 / +2
Query: 1128 WGIRNMPWLSWCWNENNHKTDRPWHDPTDEHCLP*MQRIR*DHK*QGQMPKL*RKQGSPG 949
WG M WLS W E + T P +DP + L *M R*+++* + + ++G
Sbjct: 2 WGFHEMCWLSRNWYEGFY*TPWPINDPANAASLQ*M*GYR*NYQ**RPLSTVQGREGCTR 181
Query: 948 EEGVRGSCGERNAT*PKDCIPGSS**SS*YGYRRHCFCLAT*RPSKI 808
EE SC ERNA +D IP S *S+ + Y +C C + R ++
Sbjct: 182 EEST*SSCRERNAEQSEDYIPW*SR*STRHSYWGYCICASAERTPQV 322
Score = 53.3 bits (110), Expect(3) = 8e-024
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = -2 / +2
Query: 783 C*AHNLSHRSIVWLPVCSYSS*WATASDQI*PRGGY*TRSTQGH*R*RYASAWPSFHEGS 604
C AH +S+ VW P+C+YS W+ S QI PR QG+*R* A + +EG
Sbjct: 347 CRAHTVSY*GFVWFPICAYSLGWSPTSYQIEPRRSCQA*FIQGY*R*GNADVPEAIYEGQ 526
Query: 603 SVC*IQRGVSR 571
++ + G+ R
Sbjct: 527 ALHSLHCGIPR 559
Score = 31.8 bits (63), Expect(3) = 4e-062
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -2
Query: 340 FYCWAHCTL 366
FYCWAHCTL
Sbjct: 784 FYCWAHCTL 758
Score = 28.1 bits (55), Expect(2) = 4e-023
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3 / -1
Query: 963 VSFTAWAFVLVTYDLT*SFAFRANSVHLLDH 1055
+S W V + T + F A +HLLDH
Sbjct: 167 LSLALWTAVFIIDSFTGTLTFIARMLHLLDH 75
Score = 27.6 bits (54), Expect(3) = 4e-062
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3 / -1
Query: 450 DIVKGGLLALVQLHVRQLAPWFRRKDLLQ 536
DI+K LAL+ LHV QL F K+ LQ
Sbjct: 674 DIMKCSFLALIDLHVCQL**RFSWKNSLQ 588
Score = 25.8 bits (50), Expect(3) = 8e-024
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / +2
Query: 492 HGAGPVRGDHPSRCQHRRGD 433
HG VRG++ S CQ+ RG+
Sbjct: 632 HGDR*VRGNYTS*CQYGRGE 691
Score = 23.1 bits (44), Expect(3) = e-110
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 365 RVQCAQQ*N 339
RVQCAQQ*N
Sbjct: 759 RVQCAQQ*N 785
>emb|Z71997.1|MSDNAJLP M.sativa mRNA for DnaJ-like protein
Length = 513
Score = 179 bits (386), Expect(2) = 1e-063
Identities = 71/110 (64%), Positives = 86/110 (78%)
Frame = -3 / +3
Query: 1247 EDVVHTMKVSLDDLYNGTTKKLSLSRSALXXXXXXXXXXXXXXGTCHGCRGAGMRTITRQ 1068
EDVVH++KVSL+D+YNGTTKKLSLSR+AL G C GC+G GM+ RQ
Sbjct: 177 EDVVHSIKVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRRQ 356
Query: 1067 IGLGMIQQMNTVCPECKGSGEIISDKDKCPSCKGNKVVQEKKVLEVHVEK 918
IGLGMIQQM VCP+CKG+GE+IS++D+CP CKGNK+ Q+KKVLEVHVEK
Sbjct: 357 IGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQQKKVLEVHVEK 506
Score = 167 bits (359), Expect(2) = 1e-050
Identities = 68/100 (68%), Positives = 74/100 (74%)
Frame = +1 / -3
Query: 961 LFPLQLGHLSLSLMISPDPLHSGQTVFICWIMPRPICLVIVLIPAPRQPWHVPDAPLLDP 1140
LFPL GHLSLSLM SP PL SGQT IC IMP PICL+++ IP P P H+P PL +P
Sbjct: 463 LFPLH*GHLSLSLMTSPVPLQSGQTCCIC*IMPSPICLLVIFIPVPWHPKHLPAVPLFEP 284
Query: 1141 FPLHLEHKALRDKDSFLVVPLYRSSKETFIVCTTSSPRFC 1260
FPLH EH A + DSF VVPLY SSKETFI CTTSSP FC
Sbjct: 283 FPLHFEHSAFLESDSFFVVPLYTSSKETFIECTTSSPCFC 164
Score = 84.9 bits (179), Expect(2) = 2e-022
Identities = 45/124 (36%), Positives = 66/124 (53%)
Frame = -2 / +2
Query: 1287 WGW*LKRTQTKAW*RCGAYYEGFLRRSVQWDNQETIFIAECFVLQVQGERIQEWGIRNMP 1108
W W R +T+A RCGA+Y+GFL V +E I EC VL++ ER ++W +
Sbjct: 137 WWWSFTRKKTEARRRCGAFYKGFLGGCV*RHYKEAITF*ECTVLKM*RERFKKWNCWKVF 316
Query: 1107 WLSWCWNENNHKTDRPWHDPTDEHCLP*MQRIR*DHK*QGQMPKL*RKQGSPGEEGVRGS 928
W+ E+ K + HD T+ L *+QR R H *+ MP + KQ +EG G+
Sbjct: 317 WMPGHRYEDYQKANWTGHDSTNATRLS*LQRNRRGH**ER*MPSMQGKQDYSTKEGAGGA 496
Query: 927 CGER 916
CG++
Sbjct: 497 CGKK 508
Score = 79.9 bits (168), Expect(2) = 1e-063
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3 / +3
Query: 1421 DPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDIFEQLF 1305
DPEK+E YDQYGEDALKEGMGGG+ S FH+PFDI + F
Sbjct: 6 DPEKKESYDQYGEDALKEGMGGGAGSSFHNPFDILQSFF 122
Score = 48.7 bits (100), Expect(2) = 1e-050
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / -2
Query: 1305 KKLLKNVKRAMEITAAASSHSFLKGIFSILVIDLPLLRV 1421
KK L+N+KR M+ + AS HSF KGIF+IL+I L R+
Sbjct: 122 KK*LQNIKRIMK*ASCASPHSFFKGIFTILIIRFFLFRI 6
Score = 36.3 bits (73), Expect(2) = 2e-022
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1 / +1
Query: 1414 RRGRSMTSMEKMPLRKEWEEAAAVISIALLTFLSNF 1307
+R M +M KMPL+KEW EA I L F ++F
Sbjct: 13 KRKNRMINMVKMPLKKEWGEAQEAHFIIRLIFCNHF 120
>gb|CO513103.1|CO513103 s13dSG89H0300028_122132 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 550
Score = 173 bits (373), Expect(3) = 4e-056
Identities = 68/79 (86%), Positives = 77/79 (97%)
Frame = -3 / +1
Query: 1589 KSSNNTKYYEVLGVSKTASQDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYDVLSDPEK 1410
K S++T+YYE+LGVSKTASQD+LKKAY+KAAIKNHPDKGGDPEKFKEL+QAY+VLSDPEK
Sbjct: 100 KKSDSTRYYEILGVSKTASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEK 279
Query: 1409 REIYDQYGEDALKEGMGGG 1353
R+IYD YGEDALKEGMGGG
Sbjct: 280 RDIYDTYGEDALKEGMGGG 336
Score = 90.4 bits (191), Expect(2) = 2e-030
Identities = 46/60 (76%), Positives = 49/60 (81%)
Frame = +1 / -3
Query: 1390 YWS*ISLFSGSLRTS*A*DSSLNFSGSPPLSGWFFMAAFLYAFLSSS*LAVLDTPRTS*Y 1569
Y S*IS FSGSL+TS*A SSLNFSGSPPLSG F +AAFL AF SS* AVLDTP+ S*Y
Sbjct: 299 YVS*ISRFSGSLKTS*ACASSLNFSGSPPLSG*FLIAAFL*AFFKSS*EAVLDTPKIS*Y 120
Score = 87.2 bits (184), Expect(2) = 1e-022
Identities = 37/82 (45%), Positives = 59/82 (71%)
Frame = +3 / -2
Query: 1344 TAAASSHSFLKGIFSILVIDLPLLRVTKNIISLRQLFKLLRVSTLIRMVFYGSFSVCFLK 1523
T A+++HSFLK I +I +I++ LLR+T+N+ISL LF+LL ++TLIRM+ SF + FL+
Sbjct: 345 TTASTTHSFLKSILTICIINITLLRITQNLISLC*LFELLGITTLIRMILNSSFFISFLQ 166
Query: 1524 LILTCGLRHTKNLVILGIVTTL 1589
+IL R+T + ++ +T L
Sbjct: 165 IILRSSFRYT*DFIVPRTITFL 100
Score = 61.1 bits (127), Expect(2) = 2e-030
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = +1 / -3
Query: 1132 LDPFPLHLEHKALRDKDSFLVVPLYRSSKETFIVCTTSSPRFC 1260
L+P PLH EHK +++SFL VP RSSKET TTSSPR C
Sbjct: 545 LEPLPLHFEHKTFLERESFLDVPR*RSSKETLRG*TTSSPRLC 417
Score = 52.8 bits (109), Expect(3) = 4e-056
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = -3 / +1
Query: 1247 EDVVHTMKVSLDDLYNGTTKKLSLSRSAL 1161
EDVVH +KVSL+DLY GT+KKLSLSR+ L
Sbjct: 430 EDVVHPLKVSLEDLYLGTSKKLSLSRNVL 516
Score = 35.0 bits (70), Expect(2) = 1e-022
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2 / -1
Query: 1139 LSPCTWSTKHSAIKIVSWLSHCTDRLRKPS*YAPHLHHAFVCVLLSYH 1282
L CT ST+H + + S + D ++P PHL H F VL YH
Sbjct: 538 LCHCTLSTRHFSREKAS*MFQGKDPPKRP*EDEPHLLHVFASVLGXYH 395
Score = 26.3 bits (51), Expect(3) = 4e-056
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3 / +1
Query: 1358 GGSSSDFHSPFDIFEQLF 1305
GG H PFDIF F
Sbjct: 328 GGGGGGGHDPFDIFSSFF 381
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 14,697,053
Number of Sequences: 7669
Number of extensions: 213380
Number of successful extensions: 1576
Number of sequences better than 1.0e-020: 6
length of database: 1,248,568
effective HSP length: 44
effective length of database: 911,132
effective search space used: 458299396
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)